MGE detailed information
MGE type: Genomic_island MGE length: 17086 bp
Accession: NZ_CP010119 Location: 959785..976870 Organism: Escherichia coli strain C3 Replicon: chromosome
Accession: NZ_CP010119 Location: 959785..976870 Organism: Escherichia coli strain C3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG26_RS04965 () | 955104..956006 | - | 903 | WP_000832227.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| RG26_RS04970 () | 956026..956529 | - | 504 | WP_000872005.1 | type 1 fimbria minor subunit FimG | - |
| RG26_RS04975 () | 956542..957072 | - | 531 | WP_001244826.1 | type 1 fimbria minor subunit FimF | - |
| RG26_RS04980 () | 957082..959718 | - | 2637 | WP_000120957.1 | fimbrial usher FimD | - |
| RG26_RS04985 () | 959785..960510 | - | 726 | WP_000066560.1 | hypothetical protein | VF |
| RG26_RS04990 () | 960547..961086 | - | 540 | WP_000824105.1 | hypothetical protein | VF |
| RG26_RS04995 () | 961151..961699 | - | 549 | WP_000695546.1 | hypothetical protein | VF |
| RG26_RS05005 () | 962180..962776 | - | 597 | WP_000044711.1 | hypothetical protein | VF |
| RG26_RS05010 () | 963254..963856 | - | 603 | WP_000790583.1 | hypothetical protein | VF |
| RG26_RS05020 () | 965312..966028 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| RG26_RS05025 () | 966048..967154 | + | 1107 | WP_001298927.1 | N-acetylneuraminate epimerase | - |
| RG26_RS05030 () | 967219..968199 | + | 981 | WP_000991444.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| RG26_RS05045 () | 969354..969725 | - | 372 | WP_001193488.1 | TA system toxin CbtA family protein | Toxin Detail |
| RG26_RS05050 () | 969764..970129 | - | 366 | WP_001059301.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| RG26_RS05055 () | 970155..970376 | - | 222 | WP_000691983.1 | DUF987 domain-containing protein | - |
| RG26_RS05060 () | 970373..970915 | - | 543 | WP_015740440.1 | DNA repair protein RadC | - |
| RG26_RS05065 () | 970928..971371 | - | 444 | WP_001096016.1 | antirestriction protein | - |
| RG26_RS05070 () | 971402..972223 | - | 822 | WP_001234409.1 | DUF945 domain-containing protein | - |
| RG26_RS05075 () | 972343..972816 | - | 474 | WP_001298943.1 | hypothetical protein | - |
| RG26_RS05080 () | 972888..973340 | - | 453 | WP_000734321.1 | hypothetical protein | - |
| RG26_RS05085 () | 973376..974092 | - | 717 | WP_000174910.1 | WYL domain-containing protein | - |
| RG26_RS05090 () | 974336..975211 | - | 876 | WP_001039469.1 | GTPase family protein | - |
| RG26_RS05095 () | 975296..976180 | - | 885 | WP_000240138.1 | hypothetical protein | - |
| RG26_RS05100 () | 976664..976870 | + | 207 | WP_000213332.1 | AlpA family phage regulatory protein | - |
| RG26_RS05105 () | 976967..977560 | + | 594 | WP_000656300.1 | hypothetical protein | - |
| RG26_RS05110 () | 977759..978334 | + | 576 | WP_001180706.1 | inovirus-type Gp2 protein | - |
| RG26_RS29490 () | 978505..978711 | + | 207 | WP_001372056.1 | hypothetical protein | - |
| RG26_RS05120 () | 979097..979459 | + | 363 | WP_000859002.1 | 6-carboxytetrahydropterin synthase QueD | - |
| RG26_RS05125 () | 979516..981771 | - | 2256 | WP_001083255.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|