MGE detailed information
MGE type: Prophage MGE length: 114114 bp
Accession: NZ_CP010119 Location: 4972049..5086162 Organism: Escherichia coli strain C3 Replicon: chromosome
Accession: NZ_CP010119 Location: 4972049..5086162 Organism: Escherichia coli strain C3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG26_RS26800 () | 4967730..4968056 | + | 327 | WP_001295580.1 | stress response translation initiation inhibitor YciH | - |
| RG26_RS26805 () | 4968182..4968400 | - | 219 | WP_000498253.1 | osmotically-inducible lipoprotein OsmB | - |
| RG26_RS26810 () | 4968669..4969418 | - | 750 | WP_001088621.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| RG26_RS26815 () | 4969508..4969681 | - | 174 | WP_001288368.1 | hypothetical protein | - |
| RG26_RS31040 () | 4969718..4969846 | + | 129 | WP_211180493.1 | protein YmiD | - |
| RG26_RS26820 () | 4969828..4971813 | - | 1986 | WP_000859945.1 | cyclic di-GMP phosphodiesterase | - |
| RG26_RS26825 () | 4971867..4971971 | + | 105 | WP_000221855.1 | hypothetical protein | - |
| RG26_RS26830 () | 4972049..4973983 | - | 1935 | WP_000484984.1 | exoribonuclease II | - |
| RG26_RS26835 () | 4974051..4975178 | - | 1128 | WP_000437858.1 | CMD domain-containing protein | - |
| RG26_RS26840 () | 4975323..4976111 | - | 789 | WP_000506490.1 | enoyl-ACP reductase FabI | - |
| RG26_RS26845 () | 4976479..4976832 | - | 354 | WP_000968850.1 | DUF559 domain-containing protein | - |
| RG26_RS26850 () | 4976900..4977706 | - | 807 | WP_000573407.1 | peptide ABC transporter ATP-binding protein SapF | - |
| RG26_RS26855 () | 4977708..4978700 | - | 993 | WP_001128858.1 | peptide ABC transporter ATP-binding protein SapD | - |
| RG26_RS26860 () | 4978700..4979590 | - | 891 | WP_001146163.1 | peptide ABC transporter permease SapC | - |
| RG26_RS26865 () | 4979577..4980542 | - | 966 | WP_000583277.1 | putrescine ABC transporter permease SapB | - |
| RG26_RS26870 () | 4980539..4982182 | - | 1644 | WP_001250213.1 | peptide ABC transporter substrate-binding protein SapA | - |
| RG26_RS26880 () | 4982495..4982740 | - | 246 | WP_001015110.1 | YmjA family protein | - |
| RG26_RS26885 () | 4982874..4984259 | - | 1386 | WP_000996858.1 | putrescine/proton symporter PuuP | - |
| RG26_RS30615 () | 4984249..4984413 | - | 165 | WP_120795382.1 | protein YmjE | - |
| RG26_RS26890 () | 4984562..4985980 | - | 1419 | WP_001298814.1 | glutamate-putrescine ligase | - |
| RG26_RS26895 () | 4986192..4986956 | + | 765 | WP_001382105.1 | hypothetical protein | VF |
| RG26_RS26900 () | 4986983..4987540 | + | 558 | WP_001278727.1 | HTH-type transcriptional regulator PuuR | - |
| RG26_RS26910 () | 4987815..4989302 | + | 1488 | WP_001009111.1 | aldehyde dehydrogenase PuuC | - |
| RG26_RS26915 () | 4989304..4990584 | + | 1281 | WP_000134843.1 | gamma-glutamylputrescine oxidase | - |
| RG26_RS26920 () | 4990622..4991887 | + | 1266 | WP_000069228.1 | hypothetical protein | VF |
| RG26_RS26925 () | 4992007..4992984 | - | 978 | WP_000852835.1 | hypothetical protein | VF |
| RG26_RS26930 () | 4993151..4993819 | + | 669 | WP_000511025.1 | phage shock protein PspA | - |
| RG26_RS26935 () | 4993873..4994097 | + | 225 | WP_001274963.1 | envelope stress response membrane protein PspB | - |
| RG26_RS26940 () | 4994097..4994456 | + | 360 | WP_000907382.1 | envelope stress response membrane protein PspC | - |
| RG26_RS26945 () | 4994465..4994686 | + | 222 | WP_001295585.1 | phage shock protein PspD | - |
| RG26_RS26950 () | 4994761..4995075 | + | 315 | WP_000473109.1 | thiosulfate sulfurtransferase PspE | - |
| RG26_RS26955 () | 4995288..4996967 | + | 1680 | WP_000810488.1 | glucosylglycerate phosphorylase | - |
| RG26_RS26960 () | 4996981..4998273 | + | 1293 | WP_073519362.1 | ABC transporter substrate-binding protein | - |
| RG26_RS26965 () | 4998294..4999175 | + | 882 | WP_001080781.1 | sugar ABC transporter permease | - |
| RG26_RS26970 () | 4999162..5000004 | + | 843 | WP_000224659.1 | carbohydrate ABC transporter permease | - |
| RG26_RS26975 () | 5000035..5001087 | + | 1053 | WP_000737339.1 | zinc-binding alcohol dehydrogenase | - |
| RG26_RS26980 () | 5001105..5001893 | + | 789 | WP_000690238.1 | sugar phosphate isomerase/epimerase | - |
| RG26_RS26985 () | 5001903..5002958 | + | 1056 | WP_001299974.1 | Gfo/Idh/MocA family oxidoreductase | - |
| RG26_RS26990 () | 5002955..5005222 | + | 2268 | WP_073519363.1 | kojibiose phosphorylase | - |
| RG26_RS26995 () | 5005219..5005878 | + | 660 | WP_000775799.1 | beta-phosphoglucomutase | - |
| RG26_RS27000 () | 5005892..5006974 | + | 1083 | WP_000057977.1 | hypothetical protein | VF |
| RG26_RS27005 () | 5007019..5007924 | + | 906 | WP_000735257.1 | monomeric porin OmpG | - |
| RG26_RS27010 () | 5008035..5009033 | - | 999 | WP_000075377.1 | LacI family transcriptional regulator | - |
| RG26_RS27015 () | 5009188..5010585 | + | 1398 | WP_000825784.1 | YcjX family protein | - |
| RG26_RS27020 () | 5010582..5011643 | + | 1062 | WP_000138717.1 | YcjF family protein | - |
| RG26_RS27025 () | 5011791..5013332 | + | 1542 | WP_001296763.1 | hypothetical protein | VF |
| RG26_RS27030 () | 5013376..5013882 | - | 507 | WP_000084387.1 | thiol peroxidase | - |
| RG26_RS27035 () | 5014001..5014966 | + | 966 | WP_001295588.1 | L-Ala-D/L-Glu epimerase | - |
| RG26_RS27040 () | 5014941..5015669 | - | 729 | WP_001298805.1 | murein tripeptide amidase MpaA | - |
| RG26_RS27045 () | 5015978..5016616 | - | 639 | WP_000800176.1 | SDR family oxidoreductase | - |
| RG26_RS27050 () | 5016634..5017566 | - | 933 | WP_000680606.1 | alpha/beta hydrolase | - |
| RG26_RS27055 () | 5017566..5018486 | - | 921 | WP_001298817.1 | alpha/beta hydrolase | - |
| RG26_RS27060 () | 5018624..5019523 | + | 900 | WP_000817708.1 | hypothetical protein | VF |
| RG26_RS27070 () | 5019860..5021473 | + | 1614 | WP_000683020.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| RG26_RS27075 () | 5021524..5022555 | - | 1032 | WP_000559901.1 | low conductance mechanosensitive channel YnaI | - |
| RG26_RS27080 () | 5022799..5023056 | + | 258 | WP_000605090.1 | DUF2534 family protein | - |
| RG26_RS27085 () | 5023106..5024056 | - | 951 | WP_001262123.1 | universal stress protein UspE | - |
| RG26_RS27090 () | 5024208..5024960 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| RG26_RS27095 () | 5025155..5025670 | - | 516 | WP_000945005.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| RG26_RS27100 () | 5025681..5027207 | - | 1527 | WP_000062967.1 | p-aminobenzoyl-glutamate transporter | - |
| RG26_RS27110 () | 5027241..5028686 | - | 1446 | WP_001156475.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| RG26_RS27115 () | 5028686..5029996 | - | 1311 | WP_000444955.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| RG26_RS27120 () | 5030172..5031080 | + | 909 | WP_000885467.1 | LysR family transcriptional regulator | - |
| RG26_RS27125 () | 5031410..5031973 | + | 564 | WP_001046825.1 | DNA endonuclease SmrA | - |
| RG26_RS27130 () | 5031994..5033226 | - | 1233 | WP_000628065.1 | diguanylate cyclase DgcM | - |
| RG26_RS31045 () | 5033420..5033467 | + | 48 | WP_211180494.1 | protein YnaN | - |
| RG26_RS27135 () | 5033481..5034464 | + | 984 | WP_000387395.1 | zinc transporter ZntB | - |
| RG26_RS27145 () | 5034942..5036315 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| RG26_RS27150 () | 5036444..5037379 | - | 936 | WP_001157394.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| RG26_RS27155 () | 5037431..5038666 | - | 1236 | WP_000040844.1 | hypothetical protein ; Integrase | Integrase |
| RG26_RS27160 () | 5038668..5038883 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| RG26_RS27165 () | 5038983..5039171 | - | 189 | WP_073519364.1 | DUF1187 family protein | - |
| - () | 5038987..5039165 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 5038987..5039165 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 5038987..5039165 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 5038987..5039165 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| RG26_RS27170 () | 5039164..5039358 | - | 195 | WP_021500490.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| RG26_RS27175 () | 5039422..5040510 | - | 1089 | WP_063100796.1 | recombinase RecT | - |
| RG26_RS27180 () | 5040525..5043686 | - | 3162 | WP_073519365.1 | exodeoxyribonuclease VIII | - |
| RG26_RS27185 () | 5043787..5044062 | - | 276 | WP_073519366.1 | hypothetical protein | - |
| RG26_RS27190 () | 5044137..5044313 | - | 177 | WP_000245533.1 | hypothetical protein | - |
| RG26_RS27195 () | 5044307..5044528 | - | 222 | WP_073519367.1 | killing protein KilR | - |
| RG26_RS27205 () | 5044924..5045157 | + | 234 | WP_001559054.1 | hypothetical protein | - |
| RG26_RS27210 () | 5045119..5045424 | - | 306 | WP_073519369.1 | hypothetical protein | - |
| RG26_RS27215 () | 5045674..5046135 | - | 462 | WP_000753628.1 | helix-turn-helix domain-containing protein | - |
| RG26_RS27220 () | 5046243..5046518 | + | 276 | WP_061892277.1 | helix-turn-helix domain-containing protein | - |
| RG26_RS27225 () | 5046502..5046924 | + | 423 | WP_057514222.1 | hypothetical protein | - |
| RG26_RS27230 () | 5046937..5047233 | + | 297 | WP_000417086.1 | hypothetical protein | - |
| RG26_RS27235 () | 5047234..5047485 | - | 252 | WP_000010975.1 | hypothetical protein | - |
| RG26_RS30620 () | 5047775..5048689 | + | 915 | WP_149026245.1 | hypothetical protein | - |
| RG26_RS30625 () | 5048682..5049143 | + | 462 | WP_187658851.1 | replication protein | - |
| RG26_RS27250 () | 5049178..5049963 | + | 786 | WP_073519371.1 | DUF1627 domain-containing protein | - |
| RG26_RS27255 () | 5050020..5050273 | + | 254 | Protein_4890 | DNA-binding protein | - |
| RG26_RS27260 () | 5050270..5050566 | + | 297 | WP_054626788.1 | DUF4406 domain-containing protein | - |
| RG26_RS27265 () | 5050759..5051073 | + | 315 | WP_073519372.1 | hypothetical protein | - |
| RG26_RS27270 () | 5051070..5051399 | + | 330 | WP_061351715.1 | ead/Ea22-like family protein | - |
| RG26_RS27275 () | 5051401..5051757 | + | 357 | WP_077898318.1 | hypothetical protein | - |
| RG26_RS30865 () | 5051848..5052021 | + | 174 | WP_163428211.1 | hypothetical protein | - |
| RG26_RS27280 () | 5052152..5052385 | + | 234 | WP_061351723.1 | hypothetical protein | - |
| RG26_RS27290 () | 5052840..5052995 | + | 156 | WP_000813259.1 | type I toxin-antitoxin system Hok family toxin | - |
| RG26_RS30870 () | 5053218..5053391 | + | 174 | WP_000687430.1 | hypothetical protein | - |
| RG26_RS27295 () | 5053451..5054050 | + | 600 | WP_000940332.1 | DUF1367 family protein | - |
| RG26_RS27300 () | 5054050..5054340 | + | 291 | WP_073519375.1 | DUF1364 domain-containing protein | - |
| RG26_RS27305 () | 5054337..5054879 | + | 543 | WP_000640136.1 | DUF1133 family protein | - |
| RG26_RS27310 () | 5055109..5055850 | + | 742 | Protein_4902 | AraC family transcriptional regulator | - |
| RG26_RS27315 () | 5055830..5056027 | - | 198 | WP_000898679.1 | hypothetical protein | - |
| RG26_RS27320 () | 5056026..5056418 | + | 393 | WP_001351476.1 | holin | - |
| RG26_RS27325 () | 5056408..5056683 | + | 276 | WP_000950570.1 | phage holin family protein | - |
| RG26_RS27330 () | 5056686..5057063 | + | 378 | WP_000014553.1 | M15 family metallopeptidase | - |
| RG26_RS30630 () | 5057078..5057260 | + | 183 | WP_149026241.1 | hypothetical protein | - |
| RG26_RS27335 () | 5057385..5057597 | - | 213 | WP_071702711.1 | KTSC domain-containing protein | - |
| RG26_RS27340 () | 5057573..5057752 | + | 180 | WP_032218059.1 | hypothetical protein | - |
| RG26_RS27345 () | 5057870..5058658 | + | 789 | WP_073519376.1 | ParB/Srx family N-terminal domain-containing protein | - |
| RG26_RS27350 () | 5058651..5059583 | + | 933 | WP_069901011.1 | hypothetical protein | - |
| RG26_RS27355 () | 5059519..5059770 | + | 252 | WP_001307172.1 | hypothetical protein | - |
| RG26_RS27360 () | 5059774..5060865 | + | 1092 | WP_073519377.1 | terminase small subunit | - |
| RG26_RS27365 () | 5060855..5062183 | + | 1329 | WP_000021158.1 | terminase | - |
| RG26_RS27370 () | 5062202..5063638 | + | 1437 | WP_001559065.1 | DUF1073 domain-containing protein | - |
| RG26_RS27375 () | 5063583..5064416 | + | 834 | WP_001018390.1 | hypothetical protein | - |
| RG26_RS27380 () | 5064397..5065431 | + | 1035 | Protein_4917 | DUF2213 domain-containing protein | - |
| RG26_RS27405 () | 5066742..5067032 | + | 291 | Protein_4919 | NUDIX hydrolase | - |
| RG26_RS27410 () | 5067025..5067642 | + | 618 | WP_057107048.1 | hypothetical protein | - |
| RG26_RS27415 () | 5067657..5068685 | + | 1029 | WP_001272370.1 | hypothetical protein | - |
| RG26_RS27420 () | 5068742..5069212 | + | 471 | WP_000780861.1 | hypothetical protein | - |
| RG26_RS27425 () | 5069212..5069652 | + | 441 | WP_000175376.1 | hypothetical protein | - |
| RG26_RS27430 () | 5069649..5070089 | + | 441 | WP_000762301.1 | hypothetical protein | - |
| RG26_RS27435 () | 5070076..5071020 | + | 945 | WP_001139505.1 | hypothetical protein | - |
| RG26_RS27440 () | 5071020..5072357 | + | 1338 | WP_000506595.1 | hypothetical protein | - |
| RG26_RS27445 () | 5072381..5072812 | + | 432 | WP_000938146.1 | hypothetical protein | - |
| RG26_RS27450 () | 5072809..5073426 | + | 618 | WP_000684992.1 | hypothetical protein | - |
| RG26_RS27455 () | 5073491..5075566 | + | 2076 | WP_000918396.1 | hypothetical protein | - |
| RG26_RS27460 () | 5075570..5076238 | + | 669 | WP_000056327.1 | hypothetical protein | - |
| RG26_RS27465 () | 5076235..5076501 | + | 267 | WP_000209262.1 | hypothetical protein | - |
| RG26_RS27470 () | 5076501..5077508 | + | 1008 | WP_001271167.1 | hypothetical protein | - |
| RG26_RS27475 () | 5077508..5078221 | + | 714 | WP_000063620.1 | phage baseplate protein | - |
| RG26_RS27480 () | 5078504..5078851 | + | 348 | WP_001261327.1 | hypothetical protein | - |
| RG26_RS27485 () | 5079001..5080161 | + | 1161 | WP_000426902.1 | type I restriction enzyme HsdR N-terminal domain-containing protein | - |
| RG26_RS27490 () | 5080202..5081428 | + | 1227 | WP_072277864.1 | baseplate J/gp47 family protein | - |
| RG26_RS27495 () | 5081412..5082038 | + | 627 | WP_001199731.1 | hypothetical protein | - |
| RG26_RS27500 () | 5082035..5083588 | + | 1554 | WP_077898319.1 | phage tail protein | - |
| RG26_RS27505 () | 5083591..5084136 | + | 546 | WP_077898320.1 | tail fiber assembly protein | - |
| RG26_RS27510 () | 5084160..5085593 | + | 1434 | WP_073519379.1 | prophage tail fiber N-terminal domain-containing protein | - |
| RG26_RS27515 () | 5085593..5086162 | + | 570 | WP_077898321.1 | DUF4376 domain-containing protein | - |
| RG26_RS27520 () | 5086399..5087070 | + | 672 | WP_001057015.1 | hypothetical protein | - |
| RG26_RS27525 () | 5087067..5088173 | + | 1107 | WP_000072814.1 | XRE family transcriptional regulator | - |
| RG26_RS27530 () | 5088726..5089160 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
| RG26_RS27535 () | 5089301..5090434 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|