MGE detailed information
MGE type: Prophage MGE length: 82519 bp
Accession: NZ_CP010119 Location: 3419987..3502505 Organism: Escherichia coli strain C3 Replicon: chromosome
Accession: NZ_CP010119 Location: 3419987..3502505 Organism: Escherichia coli strain C3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG26_RS18140 () | 3415937..3417469 | + | 1533 | WP_001342403.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha | - |
| RG26_RS18145 () | 3417480..3418868 | + | 1389 | WP_000014036.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | - |
| RG26_RS18150 () | 3418893..3419798 | - | 906 | Protein_3237 | AI-2 transporter TqsA | - |
| RG26_RS18160 () | 3419975..3421204 | + | 1230 | WP_000085276.1 | hypothetical protein ; Integrase | Integrase |
| RG26_RS18165 () | 3421570..3421758 | + | 189 | WP_000953272.1 | AlpA family transcriptional regulator | - |
| RG26_RS18170 () | 3421816..3422838 | + | 1023 | WP_032145563.1 | host cell division inhibitor Icd-like protein | - |
| RG26_RS18175 () | 3422835..3423065 | + | 231 | WP_000076671.1 | hypothetical protein | - |
| RG26_RS18180 () | 3423055..3423279 | + | 225 | WP_000336139.1 | hypothetical protein | - |
| RG26_RS18185 () | 3423272..3423637 | + | 366 | WP_000551751.1 | hypothetical protein | - |
| RG26_RS18190 () | 3423630..3423863 | + | 234 | WP_001204078.1 | hypothetical protein | - |
| RG26_RS18195 () | 3423856..3424089 | + | 234 | WP_001204964.1 | hypothetical protein | - |
| RG26_RS18200 () | 3424095..3424394 | + | 300 | WP_000770179.1 | DUF4222 domain-containing protein | - |
| RG26_RS18205 () | 3424391..3426145 | + | 1755 | WP_000761836.1 | DNA primase | - |
| RG26_RS18210 () | 3426434..3426712 | + | 279 | WP_000557476.1 | hypothetical protein | - |
| RG26_RS18215 () | 3426709..3427119 | + | 411 | WP_000126693.1 | single-stranded DNA-binding protein | - |
| RG26_RS18220 () | 3427132..3427404 | + | 273 | WP_000233313.1 | PerC family transcriptional regulator | - |
| RG26_RS18225 () | 3427692..3428849 | + | 1158 | WP_001137337.1 | phage major capsid protein | - |
| RG26_RS18230 () | 3428889..3429461 | + | 573 | WP_000504056.1 | HK97 family phage prohead protease | - |
| RG26_RS18235 () | 3429463..3430674 | + | 1212 | WP_000267605.1 | phage portal protein | - |
| RG26_RS18240 () | 3430671..3431009 | + | 339 | WP_001020662.1 | phage head closure protein | - |
| RG26_RS18245 () | 3431006..3431302 | + | 297 | WP_000134109.1 | head-tail connector protein | - |
| RG26_RS18250 () | 3431302..3431742 | + | 441 | WP_001145905.1 | HNH endonuclease | - |
| RG26_RS18255 () | 3431726..3431908 | + | 183 | WP_000174068.1 | hypothetical protein | - |
| RG26_RS18260 () | 3432031..3432387 | + | 357 | WP_000113645.1 | phage terminase small subunit P27 family | - |
| RG26_RS18265 () | 3432371..3434032 | + | 1662 | WP_001560954.1 | terminase large subunit | - |
| RG26_RS18270 () | 3434046..3434327 | + | 282 | WP_000133423.1 | hypothetical protein | - |
| RG26_RS30820 () | 3435059..3435202 | - | 144 | Protein_3261 | pheromone autoinducer 2 transporter | - |
| RG26_RS30990 () | 3435406..3435507 | + | 102 | WP_211180498.1 | protein YdgV | - |
| RG26_RS18280 () | 3435614..3435979 | + | 366 | WP_000276154.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| RG26_RS18285 () | 3435966..3436295 | + | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| RG26_RS18290 () | 3436334..3437155 | - | 822 | WP_001260840.1 | serine protease | - |
| RG26_RS18295 () | 3437255..3437338 | - | 84 | WP_000233090.1 | hypothetical protein | - |
| RG26_RS18300 () | 3437431..3437739 | - | 309 | WP_001443599.1 | acid resistance repetitive basic protein Asr | - |
| RG26_RS30995 () | 3437995..3438114 | + | 120 | WP_001299090.1 | hypothetical protein | - |
| RG26_RS18310 () | 3438163..3439416 | - | 1254 | WP_000091840.1 | MFS transporter | - |
| RG26_RS18315 () | 3439523..3440416 | + | 894 | WP_001019517.1 | hypothetical protein | VF |
| RG26_RS18320 () | 3440551..3441771 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| RG26_RS18325 () | 3441896..3442591 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| RG26_RS18330 () | 3442544..3443836 | - | 1293 | WP_073519299.1 | voltage-gated ClC-type chloride channel ClcB | - |
| RG26_RS18335 () | 3443995..3444609 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| RG26_RS18340 () | 3444652..3445506 | - | 855 | WP_000526490.1 | dimethyl sulfoxide reductase anchor subunit | - |
| RG26_RS18345 () | 3445508..3446125 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| RG26_RS18350 () | 3446136..3448559 | - | 2424 | WP_001342404.1 | dimethyl sulfoxide reductase subunit A | - |
| RG26_RS18355 () | 3448620..3451046 | - | 2427 | WP_000041687.1 | dimethyl sulfoxide reductase subunit A | - |
| RG26_RS18360 () | 3451245..3451550 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| RG26_RS18365 () | 3451658..3452368 | + | 711 | WP_001443598.1 | YnfC family lipoprotein | - |
| RG26_RS18370 () | 3452371..3452931 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| RG26_RS18375 () | 3452966..3453307 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| RG26_RS18380 () | 3453442..3453768 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| RG26_RS18390 () | 3453974..3454666 | + | 693 | Protein_3284 | starvation-sensing protein RspA | - |
| RG26_RS18395 () | 3454669..3455928 | - | 1260 | Protein_3285 | DUF3596 domain-containing protein | - |
| RG26_RS18400 () | 3455963..3456214 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| RG26_RS18405 () | 3456287..3458758 | - | 2472 | WP_000048331.1 | exonuclease | - |
| RG26_RS18410 () | 3458851..3459042 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| RG26_RS18415 () | 3459039..3459227 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| RG26_RS18420 () | 3459714..3460289 | - | 576 | WP_000344954.1 | hypothetical protein | - |
| RG26_RS18425 () | 3460291..3460446 | - | 156 | WP_000379589.1 | DUF1391 family protein | - |
| RG26_RS18430 () | 3460639..3461046 | - | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| RG26_RS18435 () | 3461124..3461351 | + | 228 | WP_000476993.1 | transcriptional regulator | - |
| RG26_RS18440 () | 3461335..3461856 | + | 522 | WP_000705349.1 | hypothetical protein | - |
| RG26_RS18445 () | 3461837..3462802 | + | 966 | WP_000054504.1 | hypothetical protein | - |
| RG26_RS18450 () | 3462843..3463262 | + | 420 | WP_001151196.1 | DUF977 family protein | - |
| RG26_RS18455 () | 3463296..3464636 | + | 1341 | WP_000589015.1 | ISNCY family transposase ISCARN112 | Transposase |
| RG26_RS18460 () | 3465073..3465405 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| RG26_RS18470 () | 3465608..3465913 | - | 306 | WP_071527819.1 | hypothetical protein | - |
| RG26_RS18475 () | 3465938..3466177 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| RG26_RS18480 () | 3466177..3466464 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| RG26_RS18485 () | 3466536..3466691 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| RG26_RS18490 () | 3466908..3467159 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| RG26_RS18495 () | 3467226..3467504 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| RG26_RS18500 () | 3467506..3468555 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| RG26_RS18505 () | 3468569..3469321 | + | 753 | WP_001047135.1 | antitermination protein | - |
| RG26_RS30405 () | 3469589..3469678 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| RG26_RS18510 () | 3469733..3469945 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| RG26_RS18515 () | 3470245..3470460 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| RG26_RS31000 () | 3470824..3470994 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| RG26_RS18520 () | 3471214..3471429 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| RG26_RS18525 () | 3471434..3471745 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| RG26_RS18530 () | 3471742..3472275 | + | 534 | WP_001092971.1 | lysozyme | - |
| RG26_RS18535 () | 3472272..3472769 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| RG26_RS18540 () | 3473131..3473343 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| RG26_RS18545 () | 3473354..3473542 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| RG26_RS30410 () | 3473545..3473610 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| RG26_RS18550 () | 3473690..3473845 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| RG26_RS18555 () | 3474017..3474190 | + | 174 | WP_001019139.1 | addiction module toxin, GnsA/GnsB family | - |
| RG26_RS18560 () | 3474342..3474773 | - | 432 | WP_000035576.1 | DUF1398 domain-containing protein | - |
| RG26_RS18570 () | 3475074..3475280 | + | 207 | WP_001031433.1 | hypothetical protein | - |
| RG26_RS18585 () | 3475843..3476337 | + | 495 | WP_000373425.1 | DUF1441 family protein | - |
| RG26_RS18590 () | 3476337..3478439 | + | 2103 | WP_000934123.1 | phage terminase large subunit family protein | - |
| RG26_RS18595 () | 3478436..3478648 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| RG26_RS18600 () | 3478648..3480156 | + | 1509 | WP_000985958.1 | phage portal protein | - |
| RG26_RS18605 () | 3480101..3482128 | + | 2028 | WP_001136588.1 | hypothetical protein | VF |
| RG26_RS18610 () | 3482215..3482538 | + | 324 | WP_001097045.1 | DUF2190 family protein | - |
| RG26_RS18615 () | 3482531..3482806 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| RG26_RS18620 () | 3482818..3483408 | + | 591 | WP_073519300.1 | phage tail protein | - |
| RG26_RS18625 () | 3483405..3483806 | + | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| RG26_RS18630 () | 3483818..3484561 | + | 744 | WP_000211109.1 | phage tail protein | - |
| RG26_RS18635 () | 3484622..3485008 | + | 387 | WP_001300035.1 | phage minor tail protein G | - |
| RG26_RS18640 () | 3485017..3485346 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| RG26_RS18645 () | 3485318..3488384 | + | 3067 | Protein_3334 | phage tail tape measure protein | - |
| RG26_RS18650 () | 3488384..3488713 | + | 330 | WP_000447247.1 | phage tail protein | - |
| RG26_RS18655 () | 3488723..3489421 | + | 699 | WP_001152385.1 | phage minor tail protein L | - |
| RG26_RS18660 () | 3489427..3490170 | + | 744 | WP_073519290.1 | C40 family peptidase | - |
| RG26_RS18665 () | 3490068..3490715 | + | 648 | WP_000741589.1 | tail assembly protein | - |
| RG26_RS18670 () | 3490775..3494272 | + | 3498 | WP_073519301.1 | host specificity protein J | - |
| RG26_RS18675 () | 3494343..3494942 | + | 600 | WP_001233071.1 | hypothetical protein | VF |
| RG26_RS18680 () | 3495007..3498405 | + | 3399 | WP_073519393.1 | prophage tail fiber N-terminal domain-containing protein | - |
| RG26_RS18685 () | 3498405..3498989 | + | 585 | WP_032332773.1 | tail fiber assembly protein | - |
| RG26_RS18690 () | 3499059..3499832 | - | 774 | WP_000355484.1 | hypothetical protein | - |
| RG26_RS30825 () | 3500254..3500397 | - | 144 | WP_001519525.1 | hypothetical protein | - |
| RG26_RS30830 () | 3500387..3500536 | - | 150 | WP_001519526.1 | hypothetical protein | - |
| RG26_RS18695 () | 3500523..3501056 | - | 534 | WP_000560788.1 | ImmA/IrrE family metallo-endopeptidase | - |
| RG26_RS18700 () | 3501060..3501410 | - | 351 | WP_000258782.1 | helix-turn-helix domain-containing protein | - |
| RG26_RS18705 () | 3501744..3502505 | + | 762 | WP_001519527.1 | hypothetical protein | - |
| RG26_RS18720 () | 3503253..3503735 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| RG26_RS18725 () | 3503906..3504343 | + | 438 | WP_001341638.1 | type II toxin-antitoxin system toxin RatA | - |
| RG26_RS18730 () | 3504333..3504623 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| RG26_RS18735 () | 3504685..3505026 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| RG26_RS18740 () | 3505175..3506836 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|