MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 74956 bp
Accession: NZ_CP010069 Location: 1..74956 Organism: Yersinia pseudotuberculosis str. PA3606 Replicon: plasmid unnamed1
Accession: NZ_CP010069 Location: 1..74956 Organism: Yersinia pseudotuberculosis str. PA3606 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BZ19_RS21260 () | 281..628 | - | 348 | WP_002212907.1 | Yop proteins translocation protein M | VF |
| BZ19_RS21265 () | 853..1518 | - | 666 | WP_010981371.1 | Yop proteins translocation protein L | VF |
| BZ19_RS21270 () | 1464..2093 | - | 630 | WP_002361471.1 | Yop proteins translocation protein K | VF |
| BZ19_RS21275 () | 2093..2827 | - | 735 | WP_002212912.1 | Yop proteins translocation lipoprotein J | VF |
| BZ19_RS21280 () | 2834..3181 | - | 348 | WP_002212914.1 | Yop proteins translocation protein I | VF |
| BZ19_RS21285 () | 3182..3679 | - | 498 | WP_002212915.1 | Yop proteins translocation protein H | VF |
| BZ19_RS21290 () | 3676..4023 | - | 348 | WP_011191389.1 | Putative Yop proteins translocation protein G | VF |
| BZ19_RS21295 () | 4025..4288 | - | 264 | WP_002212916.1 | Yop proteins translocation protein F | VF |
| BZ19_RS21300 () | 4289..4489 | - | 201 | WP_002212917.1 | Putative Yop proteins translocation protein E | VF |
| BZ19_RS21305 () | 4486..5745 | - | 1260 | WP_002212919.1 | Yop proteins translocation protein D | VF |
| BZ19_RS21310 () | 5742..7565 | - | 1824 | WP_042592532.1 | Yop proteins translocation protein C | VF |
| BZ19_RS21315 () | 7571..7984 | - | 414 | WP_002212925.1 | Chaperone protein YscB | VF |
| BZ19_RS21320 () | 8210..8308 | - | 99 | WP_002229797.1 | type III secretion system protein YscA | - |
| BZ19_RS21325 () | 8387..9202 | - | 816 | WP_002212931.1 | Virulence regulon transcriptional activator VirF | VF |
| BZ19_RS21330 () | 9326..9721 | - | 396 | WP_002222527.1 | Exoenzyme S synthesis protein B | VF |
| BZ19_RS21335 () | 10297..11361 | - | 1065 | WP_002212936.1 | Yop proteins translocation protein U | VF |
| BZ19_RS21340 () | 11361..12146 | - | 786 | WP_002212938.1 | Surface presentation of antigens protein SpaR | VF |
| BZ19_RS21345 () | 12143..12409 | - | 267 | WP_002212945.1 | hypothetical protein | VF |
| BZ19_RS21350 () | 12411..13064 | - | 654 | WP_002212947.1 | Surface presentation of antigens protein SpaP | VF |
| BZ19_RS21355 () | 13061..13984 | - | 924 | WP_042659881.1 | Yop proteins translocation protein Q | VF |
| BZ19_RS21360 () | 13981..15348 | - | 1368 | WP_002212950.1 | hypothetical protein | VF |
| BZ19_RS21365 () | 15348..15812 | - | 465 | WP_002212952.1 | Yop proteins translocation protein O | VF |
| BZ19_RS21370 () | 15809..17128 | - | 1320 | WP_042659882.1 | putative ATP synthase YscN | VF |
| BZ19_RS21375 () | 17326..18207 | + | 882 | WP_002212958.1 | Outer membrane protein YopN | VF |
| BZ19_RS21380 () | 18188..18466 | + | 279 | WP_002212965.1 | Protein TyeA | VF |
| BZ19_RS21385 () | 18453..18824 | + | 372 | WP_002229794.1 | Chaperone protein SycN | VF |
| BZ19_RS21390 () | 18821..19189 | + | 369 | WP_002212969.1 | Yop proteins translocation protein X | VF |
| BZ19_RS21395 () | 19186..19530 | + | 345 | WP_072080537.1 | Chaperone protein YscY | VF |
| BZ19_RS21400 () | 19517..21631 | + | 2115 | WP_002212971.1 | Invasion protein InvA | VF |
| BZ19_RS21405 () | 21628..22068 | + | 441 | WP_002220918.1 | hypothetical protein | VF |
| BZ19_RS21410 () | 22110..22397 | + | 288 | WP_002212973.1 | hypothetical protein | VF |
| BZ19_RS21415 () | 22399..23379 | + | 981 | WP_011191383.1 | Virulence-associated V antigen | VF |
| BZ19_RS21420 () | 23392..23898 | + | 507 | WP_011117633.1 | Chaperone protein IpgC | VF |
| BZ19_RS21425 () | 23876..25081 | + | 1206 | WP_011191382.1 | Protein YopB | VF |
| BZ19_RS21430 () | 25100..26020 | + | 921 | WP_002212987.1 | Protein YopD | VF |
| BZ19_RS23600 () | 26488..27125 | - | 638 | Protein_35 | IS6 family transposase | - |
| BZ19_RS21440 () | 27146..27361 | + | 216 | WP_011191379.1 | hypothetical protein | - |
| BZ19_RS21445 () | 27748..28851 | + | 1104 | WP_042659883.1 | Outer membrane protein YopM | VF |
| BZ19_RS21450 () | 28894..29211 | - | 318 | Protein_38 | IS256 family transposase ISSod4 | Transposase |
| BZ19_RS24050 () | 29093..29338 | - | 246 | WP_116442925.1 | transposase | - |
| BZ19_RS23095 () | 29341..29559 | + | 219 | Protein_40 | IS6 family transposase | - |
| BZ19_RS21455 () | 30087..30506 | - | 420 | WP_042592522.1 | hypothetical protein | - |
| BZ19_RS23100 () | 30523..30803 | - | 281 | Protein_42 | DDE-type integrase/transposase/recombinase | - |
| BZ19_RS24205 () | 30854..31165 | + | 312 | WP_042659884.1 | hypothetical protein | - |
| BZ19_RS21465 () | 31209..31601 | - | 393 | WP_042659885.1 | Chaperone protein SycT | VF |
| BZ19_RS21470 () | 31601..32569 | - | 969 | WP_042659886.1 | Cysteine protease YopT | VF |
| BZ19_RS21475 () | 33069..33617 | + | 549 | WP_042592523.1 | hypothetical protein | VF |
| BZ19_RS23605 () | 33776..34069 | + | 294 | Protein_47 | IS3 family transposase | - |
| BZ19_RS21480 () | 34215..34844 | + | 630 | WP_071880093.1 | conjugal transfer protein TraT | - |
| BZ19_RS24055 () | 34951..36096 | + | 1146 | Protein_49 | IS3 family transposase | - |
| BZ19_RS21500 () | 36855..38021 | + | 1167 | WP_002220902.1 | Sporulation initiation inhibitor protein Soj | VF |
| BZ19_RS21505 () | 38018..38983 | + | 966 | WP_042659889.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| BZ19_RS24210 () | 39143..39469 | + | 327 | WP_158499626.1 | hypothetical protein | - |
| BZ19_RS24460 () | 39619..39792 | - | 174 | WP_165285961.1 | hypothetical protein | - |
| BZ19_RS23625 () | 39877..40169 | + | 293 | Protein_54 | IS6 family transposase ISEas1 | Transposase |
| BZ19_RS21515 () | 40335..40577 | + | 243 | WP_002224342.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| BZ19_RS21520 () | 40570..40869 | + | 300 | WP_002213360.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BZ19_RS21525 () | 41009..41668 | - | 660 | WP_072080538.1 | Outer membrane virulence protein YopE | VF |
| BZ19_RS21530 () | 41862..42254 | + | 393 | WP_002213403.1 | YopE regulator | VF |
| BZ19_RS21535 () | 42317..42961 | - | 645 | Protein_59 | IS3 family transposase ISYen3 | Transposase |
| BZ19_RS21545 () | 43064..44236 | + | 1173 | WP_042659891.1 | IS21 family transposase IS21 | Transposase |
| BZ19_RS21550 () | 44236..44634 | + | 399 | Protein_61 | IS21 family transposase IS21 | Transposase |
| BZ19_RS21555 () | 45012..45437 | + | 426 | WP_002213267.1 | hypothetical protein | VF |
| BZ19_RS21570 () | 46784..47113 | - | 330 | WP_042659894.1 | hypothetical protein | - |
| BZ19_RS21575 () | 47252..47716 | - | 465 | WP_042659895.1 | hypothetical protein | - |
| BZ19_RS21580 () | 47735..48286 | - | 552 | WP_002213258.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| BZ19_RS21585 () | 48450..50759 | + | 2310 | WP_042659896.1 | Tn3 family transposase ISEc63 | Transposase |
| BZ19_RS21590 () | 50792..51142 | - | 351 | Protein_68 | IS3 family transposase IS1351 | Transposase |
| BZ19_RS21595 () | 51745..53043 | + | 1299 | WP_032494814.1 | Adhesin YadA | VF |
| BZ19_RS24260 () | 53046..53345 | - | 300 | WP_057533956.1 | hypothetical protein | - |
| BZ19_RS21605 () | 53372..53632 | - | 261 | WP_072080544.1 | IS3 family transposase ISKpn37 | Transposase |
| BZ19_RS21610 () | 53711..54169 | + | 459 | WP_002213246.1 | hypothetical protein | - |
| BZ19_RS23150 () | 54399..54659 | + | 261 | WP_072080544.1 | IS3 family transposase ISKpn37 | Transposase |
| BZ19_RS24060 () | 54686..55093 | + | 408 | WP_042659897.1 | IS3 family transposase ISKpn37 | Transposase |
| BZ19_RS24065 () | 55076..55315 | - | 240 | Protein_75 | DDE-type integrase/transposase/recombinase | - |
| BZ19_RS21625 () | 55511..55759 | + | 249 | WP_032466929.1 | Phospholipase D | VF |
| BZ19_RS21630 () | 55897..56151 | + | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| BZ19_RS21635 () | 56393..56467 | + | 75 | WP_002233140.1 | RepA leader peptide Tap | - |
| BZ19_RS21640 () | 56448..57326 | + | 879 | WP_002213292.1 | incFII family plasmid replication initiator RepA | - |
| BZ19_RS23170 () | 58499..58738 | + | 240 | WP_002213291.1 | hypothetical protein | - |
| BZ19_RS23635 () | 58916..59228 | + | 313 | Protein_81 | IS3 family transposase ISKpn37 | Transposase |
| BZ19_RS21650 () | 59484..59933 | + | 450 | WP_002229809.1 | hypothetical protein | VF |
| BZ19_RS21655 () | 59941..62139 | + | 2199 | WP_011191359.1 | Protein kinase YpkA | VF |
| BZ19_RS21660 () | 62535..63401 | + | 867 | WP_002225474.1 | Effector protein YopJ | VF |
| BZ19_RS23190 () | 63741..64136 | - | 396 | WP_050090906.1 | hypothetical protein | - |
| BZ19_RS21665 () | 64139..65317 | - | 1179 | WP_042659898.1 | hypothetical protein | - |
| BZ19_RS23195 () | 65320..65850 | - | 531 | WP_071880095.1 | PAAR domain-containing protein | - |
| BZ19_RS23200 () | 65862..66383 | - | 522 | WP_071880091.1 | PAAR domain-containing protein | - |
| BZ19_RS21685 () | 66442..67092 | - | 651 | WP_042659875.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| BZ19_RS21690 () | 67260..70238 | + | 2979 | WP_042659899.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| BZ19_RS21695 () | 70657..71235 | - | 579 | Protein_91 | IS3 family transposase ISYpe1 | Transposase |
| BZ19_RS21700 () | 71238..71471 | + | 234 | Protein_92 | transposase domain-containing protein | - |
| BZ19_RS21705 () | 71754..73160 | + | 1407 | WP_002213278.1 | Tyrosine-protein phosphatase YopH | VF |
| BZ19_RS23205 () | 73381..73653 | - | 273 | Protein_94 | transposase | - |
| BZ19_RS23640 () | 73672..74689 | - | 1018 | Protein_95 | IS3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|