MGE detailed information
MGE type: Prophage MGE length: 51495 bp
Accession: NZ_CP010014 Location: 2253355..2304849 Organism: Bacillus sp. YP1 Replicon: chromosome
Accession: NZ_CP010014 Location: 2253355..2304849 Organism: Bacillus sp. YP1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QF06_RS10995 () | 2248444..2248800 | - | 357 | WP_003237112.1 | ribosome silencing factor | - |
| QF06_RS11000 () | 2248818..2249378 | - | 561 | WP_014480316.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK | - |
| QF06_RS11005 () | 2249368..2249937 | - | 570 | WP_004398676.1 | nicotinate-nucleotide adenylyltransferase | - |
| QF06_RS11010 () | 2249949..2250239 | - | 291 | WP_003226133.1 | ribosome assembly RNA-binding protein YhbY | - |
| QF06_RS11015 () | 2250233..2251075 | - | 843 | WP_041850031.1 | shikimate dehydrogenase | - |
| QF06_RS11020 () | 2251093..2252193 | - | 1101 | WP_003229966.1 | ribosome biogenesis GTPase YqeH | - |
| QF06_RS11025 () | 2252197..2252715 | - | 519 | WP_003226126.1 | YqeG family HAD IIIA-type phosphatase | - |
| QF06_RS11030 () | 2253077..2253217 | + | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| QF06_RS11035 () | 2253522..2254253 | - | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| QF06_RS11040 () | 2254505..2255257 | - | 753 | WP_021480067.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| QF06_RS11045 () | 2255444..2256070 | + | 627 | WP_041850032.1 | TVP38/TMEM64 family protein | - |
| QF06_RS11050 () | 2256090..2256983 | - | 894 | WP_041850033.1 | 6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating | VF |
| QF06_RS11055 () | 2257235..2257957 | + | 723 | WP_032726205.1 | hypothetical protein | - |
| QF06_RS11060 () | 2257990..2258400 | - | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | - |
| QF06_RS11065 () | 2258596..2258943 | + | 348 | Protein_2239 | sigma-70 family RNA polymerase sigma factor | - |
| QF06_RS11070 () | 2258974..2260476 | - | 1503 | WP_010886573.1 | Transposon gamma-delta resolvase ; Integrase | Integrase |
| QF06_RS11075 () | 2260925..2261344 | - | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| QF06_RS11080 () | 2261356..2262396 | - | 1041 | WP_032722149.1 | arsenite efflux transporter Acr3 | - |
| QF06_RS11085 () | 2262419..2262859 | - | 441 | WP_032722151.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| QF06_RS11090 () | 2262918..2263235 | - | 318 | WP_029318103.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| QF06_RS11095 () | 2263607..2264371 | - | 765 | WP_017696291.1 | YqcI/YcgG family protein | - |
| QF06_RS11100 () | 2264814..2265941 | + | 1128 | WP_004398842.1 | response regulator aspartate phosphatase RapE | - |
| QF06_RS11105 () | 2265931..2266065 | + | 135 | WP_004398770.1 | phosphatase RapE inhibitor PhrE | - |
| QF06_RS21265 () | 2266175..2266333 | + | 159 | WP_003245945.1 | hypothetical protein | - |
| QF06_RS11110 () | 2266703..2268298 | + | 1596 | WP_004399034.1 | type II toxin-antitoxin system toxin ribonuclease YqcG | - |
| QF06_RS11115 () | 2268313..2268891 | + | 579 | WP_009967790.1 | type II toxin-antitoxin system antitoxin YqcF | - |
| QF06_RS21820 () | 2269009..2269155 | + | 147 | WP_009967791.1 | hypothetical protein | - |
| QF06_RS11120 () | 2269152..2269514 | - | 363 | WP_003229947.1 | hypothetical protein | - |
| QF06_RS11125 () | 2269530..2270009 | - | 480 | WP_004399085.1 | hypothetical protein | - |
| QF06_RS11130 () | 2270174..2270992 | - | 819 | WP_017697459.1 | N-acetylmuramoyl-L-alanine amidase CwlA | VF |
| QF06_RS11135 () | 2271037..2271459 | - | 423 | WP_017697460.1 | holin family protein | - |
| QF06_RS11140 () | 2271505..2272398 | - | 894 | WP_032722160.1 | hypothetical protein | - |
| QF06_RS11145 () | 2272486..2272650 | - | 165 | WP_003229944.1 | XkdX family protein | - |
| QF06_RS11150 () | 2272647..2272982 | - | 336 | WP_009967793.1 | XkdW family protein | - |
| QF06_RS11155 () | 2272992..2274092 | - | 1101 | WP_032722161.1 | pyocin knob domain-containing protein | - |
| QF06_RS11160 () | 2274096..2274368 | - | 273 | WP_032722163.1 | hypothetical protein | - |
| QF06_RS11165 () | 2274365..2274943 | - | 579 | WP_032722164.1 | YmfQ family protein | - |
| QF06_RS11170 () | 2274927..2275973 | - | 1047 | WP_032722165.1 | baseplate J/gp47 family protein | - |
| QF06_RS11175 () | 2275966..2276391 | - | 426 | WP_032722166.1 | DUF2634 domain-containing protein | - |
| QF06_RS11180 () | 2276404..2276670 | - | 267 | WP_032722167.1 | DUF2577 domain-containing protein | - |
| QF06_RS11185 () | 2276667..2277647 | - | 981 | WP_032722168.1 | hypothetical protein | - |
| QF06_RS11190 () | 2277660..2278319 | - | 660 | WP_032722169.1 | LysM peptidoglycan-binding domain-containing protein | - |
| QF06_RS11195 () | 2278312..2283069 | - | 4758 | WP_043940167.1 | transglycosylase SLT domain-containing protein | - |
| QF06_RS21270 () | 2283072..2283209 | - | 138 | WP_021480099.1 | hypothetical protein | - |
| QF06_RS11200 () | 2283251..2283700 | - | 450 | WP_032722171.1 | phage portal protein | - |
| QF06_RS11205 () | 2283846..2284025 | + | 180 | WP_004398662.1 | type I toxin-antitoxin system toxin TxpA | Toxin Detail |
| - () | 2283949..2284171 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2283949..2284171 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2283949..2284171 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2283949..2284171 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| QF06_RS21825 () | 2284405..2284494 | + | 90 | WP_075058862.1 | type I toxin-antitoxin system toxin BsrH | - |
| QF06_RS11210 () | 2284748..2285191 | - | 444 | WP_003229930.1 | phage tail tube protein | - |
| QF06_RS11215 () | 2285194..2286594 | - | 1401 | WP_003229929.1 | phage tail sheath family protein | - |
| QF06_RS11220 () | 2286595..2286786 | - | 192 | WP_010886574.1 | hypothetical protein | - |
| QF06_RS11225 () | 2286783..2287220 | - | 438 | WP_003229927.1 | hypothetical protein | - |
| QF06_RS11230 () | 2287233..2287736 | - | 504 | WP_003246050.1 | HK97 gp10 family phage protein | - |
| QF06_RS11235 () | 2287733..2288095 | - | 363 | WP_003229925.1 | YqbH/XkdH family protein | - |
| QF06_RS11240 () | 2288092..2288487 | - | 396 | WP_004398566.1 | DUF3199 family protein | - |
| QF06_RS11245 () | 2288491..2288802 | - | 312 | WP_003229923.1 | YqbF domain-containing protein | - |
| QF06_RS11250 () | 2288813..2289748 | - | 936 | WP_003229922.1 | phage major capsid protein | - |
| QF06_RS11255 () | 2289767..2290735 | - | 969 | WP_003229921.1 | phage portal protein | - |
| QF06_RS11260 () | 2290768..2291421 | - | 654 | WP_003229920.1 | hypothetical protein | - |
| QF06_RS11265 () | 2291462..2292379 | - | 918 | WP_004398748.1 | phage head morphogenesis protein | - |
| QF06_RS11270 () | 2292376..2293908 | - | 1533 | WP_004398894.1 | phage portal protein | - |
| QF06_RS11275 () | 2293912..2295207 | - | 1296 | WP_003229917.1 | PBSX family phage terminase large subunit | - |
| QF06_RS11280 () | 2295200..2295919 | - | 720 | WP_003229916.1 | hypothetical protein | - |
| QF06_RS11285 () | 2295987..2296451 | - | 465 | WP_004398685.1 | hypothetical protein | - |
| QF06_RS11290 () | 2296595..2297050 | - | 456 | WP_004398775.1 | hypothetical protein | - |
| QF06_RS11295 () | 2297248..2298177 | + | 930 | WP_003229913.1 | hypothetical protein | - |
| QF06_RS11300 () | 2298251..2298457 | - | 207 | WP_003229912.1 | XtrA/YqaO family protein | - |
| QF06_RS11305 () | 2298539..2298967 | - | 429 | WP_009967809.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QF06_RS21280 () | 2299063..2299212 | - | 150 | WP_003229910.1 | hypothetical protein | - |
| QF06_RS11310 () | 2299203..2300144 | - | 942 | WP_075058863.1 | ATP-binding protein | - |
| QF06_RS11315 () | 2300026..2300703 | - | 678 | WP_116362964.1 | DnaD domain protein | - |
| QF06_RS11320 () | 2300779..2301633 | - | 855 | WP_003229907.1 | recombinase RecT | - |
| QF06_RS11325 () | 2301636..2302595 | - | 960 | WP_004398673.1 | YqaJ viral recombinase family protein | - |
| QF06_RS11330 () | 2302701..2302895 | - | 195 | WP_003229905.1 | hypothetical protein | - |
| QF06_RS21830 () | 2302855..2303028 | - | 174 | WP_119123069.1 | hypothetical protein | - |
| QF06_RS11335 () | 2303025..2303282 | - | 258 | WP_003245994.1 | hypothetical protein | - |
| QF06_RS11340 () | 2303279..2303848 | - | 570 | WP_004398626.1 | helix-turn-helix transcriptional regulator | - |
| QF06_RS21285 () | 2303922..2304062 | - | 141 | WP_003229902.1 | hypothetical protein | - |
| QF06_RS11345 () | 2304092..2304322 | - | 231 | WP_004398958.1 | helix-turn-helix transcriptional regulator | - |
| QF06_RS11350 () | 2304499..2304849 | + | 351 | WP_004398704.1 | transcriptional regulator SknR | - |
| QF06_RS21290 () | 2305116..2305283 | - | 168 | WP_003229900.1 | hypothetical protein | - |
| QF06_RS11355 () | 2305639..2306175 | - | 537 | WP_004399117.1 | AAA family ATPase | - |
| QF06_RS11360 () | 2306444..2306962 | + | 519 | WP_015714342.1 | ImmA/IrrE family metallo-endopeptidase | - |
| QF06_RS11365 () | 2306968..2307360 | + | 393 | Protein_2307 | sigma-70 family RNA polymerase sigma factor | - |
| QF06_RS21835 () | 2307360..2307476 | + | 117 | WP_041850087.1 | hypothetical protein | - |
| QF06_RS21295 () | 2307427..2307639 | - | 213 | WP_080332535.1 | recombinase family protein | - |
| QF06_RS21300 () | 2307597..2307761 | - | 165 | WP_080332536.1 | hypothetical protein | - |
| QF06_RS11370 () | 2308306..2308722 | - | 417 | WP_003246154.1 | phosphate-starvation-inducible protein PsiE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|