MGE detailed information
MGE type: Genomic_island MGE length: 25405 bp
Accession: NZ_CP009997 Location: 3594147..3619551 Organism: Yersinia kristensenii strain Y231 Replicon: chromosome
Accession: NZ_CP009997 Location: 3594147..3619551 Organism: Yersinia kristensenii strain Y231 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CH54_RS16135 () | 3590186..3590698 | + | 513 | WP_038630749.1 | type VI secretion system lipoprotein TssJ | - |
| CH54_RS16140 () | 3590703..3593165 | + | 2463 | WP_042562474.1 | type VI secretion system tip protein VgrG | - |
| CH54_RS16145 () | 3593171..3594145 | + | 975 | WP_038630762.1 | hypothetical protein | - |
| CH54_RS16150 () | 3594192..3594533 | + | 342 | WP_038639277.1 | hypothetical protein | - |
| CH54_RS16155 () | 3595124..3595807 | + | 684 | WP_080723376.1 | Actin cross-linking toxin VgrG1 | VF |
| CH54_RS16160 () | 3595890..3596432 | + | 543 | WP_038630764.1 | DUF3304 domain-containing protein | - |
| CH54_RS16165 () | 3596435..3598222 | + | 1788 | WP_038630766.1 | DUF2235 domain-containing protein | - |
| CH54_RS16170 () | 3598325..3598690 | + | 366 | WP_038630768.1 | hypothetical protein | - |
| CH54_RS16180 () | 3599529..3599978 | + | 450 | WP_038630773.1 | type VI secretion system baseplate subunit TssE | - |
| CH54_RS16185 () | 3600002..3601408 | + | 1407 | WP_038630778.1 | hypothetical protein | VF |
| CH54_RS21930 () | 3601828..3601941 | + | 114 | Protein_3157 | LysR family transcriptional regulator | - |
| CH54_RS16190 () | 3601925..3602188 | + | 264 | WP_038630784.1 | hypothetical protein | - |
| CH54_RS16195 () | 3602185..3603195 | - | 1011 | WP_038630786.1 | MsnO8 family LLM class oxidoreductase | - |
| CH54_RS16200 () | 3603214..3604167 | - | 954 | WP_038630788.1 | NrtA/SsuA/CpmA family ABC transporter substrate-binding protein | - |
| CH54_RS16205 () | 3604185..3604907 | - | 723 | WP_158501186.1 | Aliphatic sulfonates import ATP-binding protein SsuB | VF |
| CH54_RS16210 () | 3604921..3605688 | - | 768 | WP_038630792.1 | ABC transporter permease | - |
| CH54_RS16215 () | 3606287..3607138 | - | 852 | WP_038630798.1 | aldo/keto reductase | - |
| CH54_RS16220 () | 3607247..3608134 | + | 888 | WP_038630800.1 | HTH-type transcriptional regulator PgrR | VF |
| CH54_RS16225 () | 3608166..3609239 | - | 1074 | WP_042562472.1 | alpha/beta fold hydrolase | - |
| CH54_RS21035 () | 3609462..3609650 | - | 189 | Protein_3166 | cupin domain-containing protein | - |
| CH54_RS16230 () | 3609856..3610381 | + | 526 | Protein_3167 | DUF1440 domain-containing protein | - |
| CH54_RS16235 () | 3610588..3611607 | - | 1020 | WP_038630804.1 | LacI family transcriptional regulator | - |
| CH54_RS16240 () | 3611900..3612964 | + | 1065 | WP_038630806.1 | cellulase family glycosylhydrolase | - |
| CH54_RS16245 () | 3613060..3614424 | + | 1365 | WP_042562471.1 | MFS transporter | - |
| CH54_RS16250 () | 3614540..3614839 | - | 300 | Protein_3171 | DUF4102 domain-containing protein | - |
| CH54_RS16255 () | 3615240..3615527 | - | 288 | WP_012104592.1 | helix-turn-helix transcriptional regulator | - |
| CH54_RS16260 () | 3615514..3615837 | - | 324 | WP_038630815.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CH54_RS16265 () | 3616037..3616903 | - | 867 | WP_038630817.1 | DUF4942 domain-containing protein | - |
| CH54_RS16270 () | 3616990..3617322 | - | 333 | WP_038630819.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CH54_RS16275 () | 3617328..3617693 | - | 366 | WP_038630821.1 | TA system toxin CbtA family protein | Toxin Detail |
| CH54_RS16280 () | 3617749..3618081 | - | 333 | WP_051957643.1 | hypothetical protein | - |
| CH54_RS16285 () | 3618075..3618548 | - | 474 | WP_038639288.1 | DNA repair protein RadC | - |
| CH54_RS16290 () | 3618581..3619012 | - | 432 | WP_038630823.1 | antirestriction protein | - |
| CH54_RS16295 () | 3619357..3619500 | - | 144 | Protein_3180 | homocysteine S-methyltransferase | - |
| CH54_RS16300 () | 3619582..3619812 | - | 231 | WP_038639291.1 | PerC family transcriptional regulator | - |
| CH54_RS16305 () | 3620822..3621322 | + | 501 | WP_038630827.1 | type VI secretion system contractile sheath small subunit | - |
| CH54_RS16310 () | 3621361..3622914 | + | 1554 | WP_004876065.1 | type VI secretion system contractile sheath large subunit | - |
| CH54_RS16315 () | 3622926..3624263 | + | 1338 | WP_038630830.1 | type VI secretion system baseplate subunit TssK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|