MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 71829 bp
Accession: NZ_CP009997 Location: 2281206..2353034 Organism: Yersinia kristensenii strain Y231 Replicon: chromosome
Accession: NZ_CP009997 Location: 2281206..2353034 Organism: Yersinia kristensenii strain Y231 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CH54_RS10235 () | 2276962..2278110 | - | 1149 | WP_038637006.1 | glycerate kinase | - |
| CH54_RS10240 () | 2278267..2279151 | - | 885 | WP_038637012.1 | 2-hydroxy-3-oxopropionate reductase | - |
| CH54_RS10245 () | 2279222..2279992 | - | 771 | WP_038637013.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| CH54_RS10250 () | 2280460..2281035 | + | 576 | WP_038637015.1 | transcriptional regulator | - |
| CH54_RS10260 () | 2281477..2282439 | - | 963 | WP_042562587.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CH54_RS10265 () | 2282544..2282771 | - | 228 | WP_144404287.1 | hypothetical protein | - |
| CH54_RS20800 () | 2282758..2282943 | - | 186 | WP_071841747.1 | host cell division inhibitor Icd-like protein | - |
| CH54_RS21905 () | 2283135..2283311 | + | 177 | WP_042562585.1 | hypothetical protein | - |
| CH54_RS10275 () | 2283510..2284001 | + | 492 | WP_050111686.1 | hypothetical protein | - |
| CH54_RS10280 () | 2284165..2285325 | - | 1161 | WP_042562584.1 | IS30 family transposase ISCfr4 | Transposase |
| CH54_RS10285 () | 2285668..2286339 | + | 672 | WP_019082607.1 | hypothetical protein | - |
| CH54_RS10290 () | 2286485..2288212 | - | 1728 | WP_042562583.1 | ATP-dependent helicase | - |
| CH54_RS10295 () | 2288209..2290083 | - | 1875 | WP_042562582.1 | AAA family ATPase | - |
| CH54_RS10300 () | 2290376..2291491 | - | 1116 | WP_071841812.1 | TraI domain-containing protein | - |
| CH54_RS10305 () | 2291607..2292416 | - | 810 | WP_042562581.1 | DNA/RNA non-specific endonuclease | - |
| CH54_RS10310 () | 2293197..2293496 | - | 300 | WP_042562580.1 | TA system toxin CbtA family protein | - |
| CH54_RS10315 () | 2293519..2294493 | - | 975 | WP_042562671.1 | DUF1738 domain-containing protein | - |
| CH54_RS10320 () | 2295180..2295596 | + | 417 | WP_042562579.1 | hypothetical protein | - |
| CH54_RS10325 () | 2296115..2296561 | + | 447 | WP_042562578.1 | DUF4231 domain-containing protein | - |
| CH54_RS10330 () | 2296582..2297673 | + | 1092 | WP_042562577.1 | nucleoid-associated protein | - |
| CH54_RS10335 () | 2297670..2298659 | + | 990 | WP_042562576.1 | RelA/SpoT domain-containing protein | - |
| CH54_RS21555 () | 2299601..2299912 | + | 312 | WP_144404288.1 | hypothetical protein | - |
| CH54_RS10340 () | 2299917..2300798 | - | 882 | WP_042562575.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CH54_RS10350 () | 2301880..2302317 | - | 438 | WP_042562573.1 | hypothetical protein | - |
| CH54_RS10355 () | 2302304..2302723 | - | 420 | WP_042562572.1 | hypothetical protein | - |
| CH54_RS10365 () | 2303200..2303556 | - | 357 | WP_042562570.1 | putative addiction module antidote protein | - |
| CH54_RS10370 () | 2303537..2303905 | - | 369 | WP_080868716.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CH54_RS10385 () | 2305582..2305800 | + | 219 | WP_042562569.1 | hypothetical protein | - |
| CH54_RS10390 () | 2305836..2307338 | - | 1503 | WP_042562568.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| CH54_RS10395 () | 2307338..2307613 | - | 276 | WP_042562567.1 | hypothetical protein | - |
| CH54_RS10400 () | 2307697..2309118 | - | 1422 | WP_042562566.1 | integrating conjugative element protein | - |
| CH54_RS10405 () | 2309142..2310095 | - | 954 | WP_042562565.1 | TIGR03756 family integrating conjugative element protein | - |
| CH54_RS10410 () | 2310095..2310493 | - | 399 | WP_042562564.1 | TIGR03757 family integrating conjugative element protein | - |
| CH54_RS10415 () | 2310864..2311181 | + | 318 | WP_080868746.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CH54_RS10420 () | 2311178..2311516 | + | 339 | WP_042562562.1 | helix-turn-helix domain-containing protein | - |
| CH54_RS10425 () | 2311636..2312783 | + | 1148 | Protein_2040 | IS30 family transposase ISCfr4 | Transposase |
| CH54_RS21825 () | 2312734..2313114 | + | 381 | WP_162484229.1 | hypothetical protein | - |
| CH54_RS10430 () | 2313391..2314308 | - | 918 | WP_042562561.1 | hypothetical protein | - |
| CH54_RS10435 () | 2314311..2315387 | - | 1077 | WP_052488220.1 | hypothetical protein | - |
| CH54_RS10440 () | 2315896..2317134 | - | 1239 | Protein_2044 | IS110 family transposase ISCps4 | Transposase |
| CH54_RS10445 () | 2317908..2318156 | + | 249 | WP_042562560.1 | hypothetical protein | - |
| CH54_RS10450 () | 2318179..2318823 | + | 645 | WP_042562559.1 | hypothetical protein | - |
| CH54_RS10455 () | 2319059..2319241 | + | 183 | WP_042562558.1 | hypothetical protein | - |
| CH54_RS10460 () | 2319601..2319945 | + | 345 | WP_004705513.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CH54_RS10465 () | 2319947..2320264 | + | 318 | WP_004705512.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CH54_RS10470 () | 2320389..2320742 | - | 354 | WP_042562557.1 | helix-turn-helix domain-containing protein | - |
| CH54_RS10480 () | 2321144..2321476 | + | 333 | WP_042562555.1 | hypothetical protein | - |
| CH54_RS10485 () | 2321654..2324452 | - | 2799 | WP_080868721.1 | conjugative transfer ATPase | - |
| CH54_RS10490 () | 2324452..2324862 | - | 411 | WP_042562554.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| CH54_RS10495 () | 2324872..2326356 | - | 1485 | WP_042562553.1 | TIGR03752 family integrating conjugative element protein | - |
| CH54_RS10500 () | 2326346..2327221 | - | 876 | WP_080868747.1 | TIGR03749 family integrating conjugative element protein | - |
| CH54_RS10505 () | 2327248..2327901 | - | 654 | WP_042562552.1 | TIGR03746 family integrating conjugative element protein | - |
| CH54_RS10510 () | 2327894..2328274 | - | 381 | WP_042562551.1 | TIGR03750 family conjugal transfer protein | - |
| CH54_RS10515 () | 2328287..2328589 | - | 303 | WP_144404295.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| CH54_RS10520 () | 2328697..2328933 | - | 237 | WP_042562549.1 | TIGR03758 family integrating conjugative element protein | - |
| CH54_RS10525 () | 2328930..2329244 | - | 315 | WP_042562548.1 | hypothetical protein | - |
| CH54_RS10530 () | 2330122..2331288 | - | 1167 | WP_042562547.1 | toll/interleukin-1 receptor domain-containing protein | - |
| CH54_RS10535 () | 2331403..2332839 | - | 1437 | WP_042562546.1 | SIR2 family protein | - |
| CH54_RS10540 () | 2332997..2333479 | - | 483 | WP_042562545.1 | TIR domain-containing protein | - |
| CH54_RS10545 () | 2333599..2335518 | - | 1920 | WP_042562544.1 | NACHT domain-containing protein | - |
| CH54_RS10550 () | 2336173..2336931 | - | 759 | WP_042562666.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| CH54_RS10555 () | 2336966..2339035 | - | 2070 | WP_042562543.1 | type IV conjugative transfer system coupling protein TraD | - |
| CH54_RS10560 () | 2339171..2339668 | - | 498 | WP_042562665.1 | integrating conjugative element protein | - |
| CH54_RS10565 () | 2339704..2340378 | - | 675 | WP_042562664.1 | TIGR03759 family integrating conjugative element protein | - |
| CH54_RS10570 () | 2340480..2341127 | - | 648 | WP_071841748.1 | hypothetical protein | VF |
| CH54_RS21560 () | 2342522..2342620 | + | 99 | WP_071841749.1 | DUF4113 domain-containing protein | - |
| CH54_RS10585 () | 2342700..2343977 | + | 1278 | WP_042562542.1 | SH3 domain-containing protein | - |
| CH54_RS21255 () | 2344247..2345428 | + | 1182 | WP_144404289.1 | HNH endonuclease | - |
| CH54_RS10595 () | 2345667..2346980 | + | 1314 | WP_042562541.1 | hypothetical protein | - |
| CH54_RS10600 () | 2347038..2348297 | - | 1260 | WP_042562540.1 | helix-turn-helix domain-containing protein | - |
| CH54_RS10605 () | 2348297..2348866 | - | 570 | WP_042562539.1 | DUF2857 domain-containing protein | - |
| CH54_RS10610 () | 2348859..2349098 | - | 240 | WP_042562538.1 | TraR/DksA family transcriptional regulator | - |
| CH54_RS10615 () | 2349091..2350713 | - | 1623 | WP_042562537.1 | ParB family protein | - |
| CH54_RS10620 () | 2350703..2352046 | - | 1344 | WP_042562536.1 | replicative DNA helicase | - |
| CH54_RS10625 () | 2352043..2352918 | - | 876 | WP_038630888.1 | Tyrosine-protein kinase CpsD | VF |
| CH54_RS21970 () | 2353379..2353462 | - | 84 | Protein_2081 | transposase | - |
| CH54_RS10630 () | 2353814..2354059 | + | 246 | WP_038637016.1 | hemin uptake protein HemP | - |
| CH54_RS10635 () | 2354211..2356241 | + | 2031 | WP_038637018.1 | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor | - |
| CH54_RS10640 () | 2356353..2357390 | + | 1038 | WP_038637019.1 | hemin-degrading factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|