MGE detailed information
MGE type: Prophage MGE length: 67094 bp
Accession: NZ_CP009885 Location: 801718..868811 Organism: Xylella fastidiosa strain Hib4 Replicon: chromosome
Accession: NZ_CP009885 Location: 801718..868811 Organism: Xylella fastidiosa strain Hib4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XFHB_RS03690 () | 798012..799100 | + | 1089 | WP_088577798.1 | phosphoserine transaminase | - |
| XFHB_RS03695 () | 799180..800304 | + | 1125 | WP_023907470.1 | prephenate dehydratase | - |
| XFHB_RS03700 () | 800393..801721 | + | 1329 | WP_088577799.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| XFHB_RS03710 () | 802569..802769 | + | 201 | WP_088577801.1 | hypothetical protein | - |
| XFHB_RS14170 () | 803304..803576 | - | 273 | WP_157293235.1 | hypothetical protein | - |
| XFHB_RS03725 () | 804573..804946 | - | 374 | Protein_671 | hypothetical protein | - |
| XFHB_RS03730 () | 804873..805535 | - | 663 | WP_194955712.1 | hypothetical protein | - |
| XFHB_RS03735 () | 805537..805986 | - | 450 | WP_088577804.1 | baseplate J/gp47 family protein | - |
| XFHB_RS03740 () | 805922..806143 | - | 222 | WP_088577805.1 | hypothetical protein | - |
| XFHB_RS03745 () | 806136..806636 | - | 501 | WP_088577806.1 | lysozyme | - |
| XFHB_RS03750 () | 806737..807467 | - | 731 | Protein_676 | site-specific DNA-methyltransferase | - |
| XFHB_RS03760 () | 808157..810022 | + | 1866 | WP_088577807.1 | excinuclease ABC subunit UvrC | - |
| XFHB_RS03765 () | 810019..810654 | + | 636 | WP_010894757.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| XFHB_RS03780 () | 811349..811798 | - | 450 | WP_010894755.1 | hypothetical protein | - |
| XFHB_RS03785 () | 812006..812503 | - | 498 | WP_010894754.1 | hypothetical protein | - |
| XFHB_RS03790 () | 813127..814131 | + | 1005 | WP_010894753.1 | porphobilinogen synthase | - |
| XFHB_RS03795 () | 814534..814917 | - | 384 | WP_004089538.1 | VOC family protein | - |
| XFHB_RS03800 () | 815052..815430 | - | 379 | Protein_683 | DUF2913 family protein | - |
| XFHB_RS03805 () | 815430..816133 | + | 704 | Protein_684 | IS6 family transposase ISYps1 | Transposase |
| XFHB_RS03810 () | 816265..817599 | + | 1335 | WP_088577808.1 | glutamate-1-semialdehyde 2,1-aminomutase | - |
| XFHB_RS03815 () | 817695..818549 | - | 855 | WP_010894748.1 | iron-sulfur cluster carrier protein ApbC | - |
| XFHB_RS03820 () | 819268..820041 | + | 774 | WP_060872089.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| XFHB_RS03825 () | 820038..820502 | + | 465 | WP_060872088.1 | Low molecular weight protein-tyrosine-phosphatase YfkJ | VF |
| XFHB_RS03830 () | 820489..821190 | - | 702 | WP_088577809.1 | site-specific DNA-methyltransferase | - |
| XFHB_RS03835 () | 821572..822984 | - | 1413 | WP_088577810.1 | DEAD/DEAH box helicase | - |
| XFHB_RS03840 () | 823069..823353 | + | 285 | WP_088577811.1 | DUF1640 domain-containing protein | - |
| XFHB_RS03845 () | 823355..823633 | - | 279 | WP_088577812.1 | VRR-NUC domain-containing protein | - |
| XFHB_RS03850 () | 823630..825810 | - | 2181 | WP_088577813.1 | DNA polymerase | - |
| XFHB_RS03855 () | 825812..826969 | - | 1158 | WP_194955713.1 | hypothetical protein | - |
| XFHB_RS03860 () | 827041..827607 | - | 567 | WP_088577815.1 | DUF2815 family protein | - |
| XFHB_RS03865 () | 827670..828884 | - | 1215 | Protein_696 | DUF2800 domain-containing protein | - |
| XFHB_RS14180 () | 828881..829327 | - | 447 | WP_157293237.1 | hypothetical protein | - |
| XFHB_RS03875 () | 829382..829576 | - | 195 | WP_088577816.1 | hypothetical protein | - |
| XFHB_RS03880 () | 829608..829799 | - | 192 | WP_088577817.1 | hypothetical protein | - |
| XFHB_RS03885 () | 829823..830014 | - | 192 | WP_088577818.1 | hypothetical protein | - |
| XFHB_RS03890 () | 830314..830796 | + | 483 | WP_088578559.1 | hypothetical protein | - |
| XFHB_RS03895 () | 830856..831326 | - | 471 | WP_088577819.1 | DUF1566 domain-containing protein | - |
| XFHB_RS03900 () | 831323..831748 | - | 426 | WP_088578560.1 | hypothetical protein | - |
| XFHB_RS03905 () | 831754..832314 | - | 561 | WP_088577820.1 | hypothetical protein | - |
| XFHB_RS03910 () | 832537..832881 | - | 345 | WP_088578561.1 | hypothetical protein | - |
| XFHB_RS03915 () | 832919..833437 | - | 519 | WP_088577821.1 | hypothetical protein | - |
| XFHB_RS03920 () | 833495..834259 | - | 765 | WP_088577822.1 | XRE family transcriptional regulator | - |
| XFHB_RS03925 () | 834244..834561 | + | 318 | WP_157293238.1 | helix-turn-helix domain-containing protein | - |
| XFHB_RS03930 () | 834551..834775 | + | 225 | WP_194955714.1 | hypothetical protein | - |
| XFHB_RS03935 () | 834829..835017 | + | 189 | WP_088577824.1 | hypothetical protein | - |
| XFHB_RS03940 () | 835014..835262 | + | 249 | WP_069107038.1 | hypothetical protein | - |
| XFHB_RS03945 () | 835323..835565 | + | 243 | WP_023907032.1 | hypothetical protein | - |
| XFHB_RS03950 () | 835562..835921 | + | 360 | WP_023907031.1 | hypothetical protein | - |
| XFHB_RS03955 () | 836021..836356 | + | 336 | WP_088577825.1 | hypothetical protein | - |
| XFHB_RS03960 () | 836353..837180 | + | 828 | WP_088577826.1 | Bro-N domain-containing protein | - |
| XFHB_RS03965 () | 837316..839850 | + | 2535 | WP_088577827.1 | DNA primase | - |
| XFHB_RS03970 () | 840593..841210 | + | 618 | WP_088578562.1 | hypothetical protein | - |
| XFHB_RS03975 () | 841177..841665 | + | 489 | WP_088577828.1 | lysozyme | - |
| XFHB_RS03980 () | 841667..841996 | + | 330 | WP_194955723.1 | phage holin family protein | - |
| XFHB_RS03985 () | 841986..842447 | + | 462 | WP_088577830.1 | hypothetical protein | - |
| XFHB_RS03990 () | 842449..842673 | + | 225 | WP_088577831.1 | hypothetical protein | - |
| XFHB_RS03995 () | 842804..843385 | + | 582 | WP_194955715.1 | terminase small subunit | - |
| XFHB_RS04000 () | 843378..845330 | + | 1953 | WP_088577833.1 | phage terminase large subunit family protein | - |
| XFHB_RS04005 () | 845334..845885 | + | 552 | WP_088577834.1 | hypothetical protein | - |
| XFHB_RS04010 () | 845882..847483 | + | 1602 | WP_088577835.1 | phage portal protein | - |
| XFHB_RS04015 () | 847467..849347 | + | 1881 | WP_088577836.1 | phage major capsid protein | - |
| XFHB_RS04020 () | 849365..849625 | + | 261 | WP_060872391.1 | hypothetical protein | - |
| XFHB_RS04025 () | 849625..849948 | + | 324 | WP_088577837.1 | hypothetical protein | - |
| XFHB_RS04030 () | 849945..850466 | + | 522 | WP_088577838.1 | hypothetical protein | - |
| XFHB_RS04035 () | 850442..850984 | + | 543 | WP_088577839.1 | hypothetical protein | - |
| XFHB_RS04040 () | 850981..851568 | + | 588 | WP_088577840.1 | phage baseplate assembly protein V | - |
| XFHB_RS04045 () | 851573..851848 | - | 276 | WP_010893244.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| XFHB_RS04050 () | 851859..852140 | - | 282 | WP_042463596.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XFHB_RS04055 () | 852197..852496 | - | 300 | WP_088577841.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| XFHB_RS04060 () | 852500..852778 | - | 279 | WP_088577842.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XFHB_RS04065 () | 852869..853207 | + | 339 | WP_042462908.1 | GPW/gp25 family protein | - |
| XFHB_RS04070 () | 853207..854100 | + | 894 | WP_088577843.1 | baseplate J/gp47 family protein | - |
| XFHB_RS04075 () | 854093..854650 | + | 558 | WP_088577844.1 | phage tail protein I | - |
| XFHB_RS04080 () | 854658..856250 | + | 1593 | WP_088577845.1 | tail fiber domain-containing protein | - |
| XFHB_RS04085 () | 856315..857493 | + | 1179 | WP_088577846.1 | phage tail sheath family protein | - |
| XFHB_RS04090 () | 857493..858002 | + | 510 | WP_088577847.1 | phage major tail tube protein | - |
| XFHB_RS04095 () | 858005..858292 | + | 288 | WP_088577848.1 | phage tail assembly protein | - |
| XFHB_RS04100 () | 858419..860638 | + | 2220 | WP_088577849.1 | phage tail tape measure protein | - |
| XFHB_RS04105 () | 860635..861117 | + | 483 | WP_088577850.1 | phage tail protein | - |
| XFHB_RS04110 () | 861114..861332 | + | 219 | WP_088577851.1 | tail protein X | - |
| XFHB_RS04115 () | 861323..862405 | + | 1083 | WP_088577852.1 | phage late control D family protein | - |
| XFHB_RS04120 () | 862701..863042 | - | 342 | WP_010893891.1 | cytochrome o ubiquinol oxidase subunit IV | - |
| XFHB_RS04125 () | 863042..863650 | - | 609 | WP_088577853.1 | cytochrome o ubiquinol oxidase subunit III | - |
| XFHB_RS04130 () | 863656..865653 | - | 1998 | WP_088577854.1 | cytochrome o ubiquinol oxidase subunit I | - |
| XFHB_RS04135 () | 865647..866606 | - | 960 | WP_023907802.1 | ubiquinol oxidase subunit II | - |
| XFHB_RS04140 () | 867070..868068 | - | 999 | WP_023907801.1 | polyprenyl synthetase family protein | - |
| XFHB_RS04145 () | 868317..868811 | + | 495 | WP_004083791.1 | single-stranded DNA-binding protein | - |
| XFHB_RS04150 () | 870425..871336 | + | 912 | WP_010893900.1 | class I SAM-dependent methyltransferase | - |
| XFHB_RS04155 () | 871635..872845 | + | 1211 | Protein_754 | cation:proton antiporter | - |
| XFHB_RS04160 () | 873022..873549 | - | 528 | WP_010893902.1 | lactoylglutathione lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|