MGE detailed information
MGE type: Prophage MGE length: 41263 bp
Accession: NZ_CP009885 Location: 2501127..2542389 Organism: Xylella fastidiosa strain Hib4 Replicon: chromosome
Accession: NZ_CP009885 Location: 2501127..2542389 Organism: Xylella fastidiosa strain Hib4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XFHB_RS12280 () | 2496244..2497245 | - | 1002 | WP_023908101.1 | phenylalanine--tRNA ligase subunit alpha | - |
| XFHB_RS12285 () | 2497518..2497877 | - | 360 | WP_010893263.1 | 50S ribosomal protein L20 | - |
| XFHB_RS12290 () | 2497888..2498085 | - | 198 | WP_004090402.1 | 50S ribosomal protein L35 | - |
| XFHB_RS12295 () | 2498331..2498858 | - | 528 | WP_075584689.1 | translation initiation factor IF-3 | - |
| XFHB_RS12300 () | 2498926..2500833 | - | 1908 | WP_010893260.1 | threonine--tRNA ligase | - |
| XFHB_RS12310 () | 2501925..2503007 | - | 1083 | WP_088578415.1 | phage late control D family protein | - |
| XFHB_RS12315 () | 2502998..2503216 | - | 219 | WP_023906711.1 | tail protein X | - |
| XFHB_RS12320 () | 2503213..2503695 | - | 483 | WP_088578416.1 | phage tail protein | - |
| XFHB_RS12325 () | 2503692..2505911 | - | 2220 | WP_088578417.1 | phage tail tape measure protein | - |
| XFHB_RS12330 () | 2506038..2506325 | - | 288 | WP_088578418.1 | phage tail assembly protein | - |
| XFHB_RS12335 () | 2506328..2506837 | - | 510 | WP_088578419.1 | phage major tail tube protein | - |
| XFHB_RS12340 () | 2506837..2508015 | - | 1179 | WP_088577846.1 | phage tail sheath family protein | - |
| XFHB_RS12345 () | 2508080..2509672 | - | 1593 | WP_088577845.1 | tail fiber domain-containing protein | - |
| XFHB_RS12350 () | 2509680..2510237 | - | 558 | WP_088577844.1 | phage tail protein I | - |
| XFHB_RS12355 () | 2510230..2511123 | - | 894 | WP_088577843.1 | baseplate J/gp47 family protein | - |
| XFHB_RS12360 () | 2511123..2511461 | - | 339 | WP_042462908.1 | GPW/gp25 family protein | - |
| XFHB_RS12365 () | 2511611..2511874 | + | 264 | WP_060872141.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| XFHB_RS12370 () | 2511861..2512142 | + | 282 | WP_060872142.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| XFHB_RS12375 () | 2512188..2512775 | - | 588 | WP_088578420.1 | phage baseplate assembly protein V | - |
| XFHB_RS12380 () | 2512772..2513314 | - | 543 | WP_088578421.1 | hypothetical protein | - |
| XFHB_RS12385 () | 2513290..2513811 | - | 522 | WP_088578422.1 | hypothetical protein | - |
| XFHB_RS12390 () | 2513808..2514131 | - | 324 | WP_088578423.1 | hypothetical protein | - |
| XFHB_RS12395 () | 2514131..2514391 | - | 261 | WP_088578424.1 | hypothetical protein | - |
| XFHB_RS12400 () | 2514409..2516289 | - | 1881 | WP_088578425.1 | phage major capsid protein | - |
| XFHB_RS12405 () | 2516273..2517871 | - | 1599 | WP_088578426.1 | phage portal protein | - |
| XFHB_RS12410 () | 2517868..2518416 | - | 549 | WP_088578427.1 | hypothetical protein | - |
| XFHB_RS12415 () | 2518420..2520372 | - | 1953 | WP_088578428.1 | phage terminase large subunit family protein | - |
| XFHB_RS12420 () | 2520365..2520940 | - | 576 | WP_194955701.1 | terminase small subunit | - |
| XFHB_RS12425 () | 2521071..2521295 | - | 225 | WP_069107045.1 | hypothetical protein | - |
| XFHB_RS12430 () | 2521297..2521758 | - | 462 | WP_088578430.1 | hypothetical protein | - |
| XFHB_RS12435 () | 2521748..2522077 | - | 330 | WP_194955723.1 | phage holin family protein | - |
| XFHB_RS12440 () | 2522079..2522567 | - | 489 | WP_088578431.1 | lysozyme | - |
| XFHB_RS12450 () | 2523648..2526182 | - | 2535 | WP_088578432.1 | DNA primase | - |
| XFHB_RS12455 () | 2526321..2526890 | - | 570 | WP_088578626.1 | hypothetical protein | - |
| XFHB_RS12460 () | 2526894..2527151 | - | 258 | Protein_2298 | hypothetical protein | - |
| XFHB_RS12465 () | 2527180..2527431 | - | 252 | WP_088578433.1 | hypothetical protein | - |
| XFHB_RS12470 () | 2527500..2527748 | - | 249 | WP_088578434.1 | hypothetical protein | - |
| XFHB_RS12475 () | 2527745..2527933 | - | 189 | WP_088578435.1 | hypothetical protein | - |
| XFHB_RS14630 () | 2527987..2528163 | - | 177 | WP_194955702.1 | hypothetical protein | - |
| XFHB_RS12485 () | 2528550..2528750 | - | 201 | WP_088578436.1 | Rha family transcriptional regulator | - |
| XFHB_RS12490 () | 2528824..2529594 | + | 771 | WP_088578437.1 | helix-turn-helix transcriptional regulator | - |
| XFHB_RS12495 () | 2529835..2530146 | + | 312 | WP_052262873.1 | hypothetical protein | - |
| XFHB_RS12500 () | 2530336..2530863 | + | 528 | WP_088578438.1 | hypothetical protein | - |
| XFHB_RS12505 () | 2530860..2531228 | + | 369 | WP_088578439.1 | hypothetical protein | - |
| XFHB_RS12510 () | 2531292..2531696 | + | 405 | WP_088578440.1 | hypothetical protein | - |
| XFHB_RS12515 () | 2531753..2532235 | - | 483 | WP_088578559.1 | hypothetical protein | - |
| XFHB_RS12520 () | 2532535..2532726 | + | 192 | WP_088578441.1 | hypothetical protein | - |
| XFHB_RS12525 () | 2532750..2532941 | + | 192 | WP_088578442.1 | hypothetical protein | - |
| XFHB_RS12530 () | 2532973..2533170 | + | 198 | WP_088578443.1 | hypothetical protein | - |
| XFHB_RS12535 () | 2533222..2533665 | + | 444 | WP_088578444.1 | hypothetical protein | - |
| XFHB_RS12540 () | 2533662..2534939 | + | 1278 | WP_088578445.1 | DUF2800 domain-containing protein | - |
| XFHB_RS12545 () | 2534939..2535505 | + | 567 | WP_088578446.1 | DUF2815 family protein | - |
| XFHB_RS12550 () | 2535574..2536722 | + | 1149 | WP_088578627.1 | hypothetical protein | - |
| XFHB_RS12555 () | 2536724..2538904 | + | 2181 | WP_088578447.1 | DNA polymerase | - |
| XFHB_RS12560 () | 2538901..2539179 | + | 279 | WP_088578448.1 | VRR-NUC domain-containing protein | - |
| XFHB_RS12565 () | 2539181..2539486 | - | 306 | WP_023907477.1 | hypothetical protein | - |
| XFHB_RS12570 () | 2539550..2540968 | + | 1419 | WP_088578449.1 | DEAD/DEAH box helicase | - |
| XFHB_RS14565 () | 2540965..2541129 | + | 165 | WP_167701484.1 | hypothetical protein | - |
| XFHB_RS12575 () | 2541122..2541370 | + | 249 | WP_088578450.1 | DUF4224 domain-containing protein | - |
| XFHB_RS12580 () | 2541370..2542389 | + | 1020 | WP_088578451.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| XFHB_RS12585 () | 2542710..2542988 | + | 279 | WP_046418477.1 | hypothetical protein | - |
| XFHB_RS12595 () | 2544132..2544998 | + | 867 | Protein_2325 | 30S ribosomal protein S6--L-glutamate ligase | - |
| XFHB_RS12600 () | 2545684..2546361 | + | 678 | WP_010894955.1 | response regulator transcription factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|