MGE detailed information
MGE type: Prophage MGE length: 15022 bp
Accession: NZ_CP009838 Location: 4407406..4422427 Organism: Yersinia enterocolitica strain 2516-87 Replicon: chromosome
Accession: NZ_CP009838 Location: 4407406..4422427 Organism: Yersinia enterocolitica strain 2516-87 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CH48_RS20210 () | 4402449..4403651 | - | 1203 | WP_042663999.1 | IS256 family transposase | - |
| CH48_RS22020 () | 4403844..4404365 | - | 522 | WP_013649992.1 | ricin-type beta-trefoil lectin domain protein | - |
| CH48_RS20215 () | 4404503..4405159 | - | 657 | WP_005166647.1 | class I SAM-dependent methyltransferase | - |
| CH48_RS20225 () | 4406001..4407203 | - | 1203 | WP_042664001.1 | IS256 family transposase | - |
| CH48_RS20230 () | 4407406..4408107 | - | 702 | WP_013649994.1 | PAS and helix-turn-helix domain-containing protein | - |
| CH48_RS20235 () | 4408161..4409474 | - | 1314 | WP_032904248.1 | cytosine permease | - |
| CH48_RS20240 () | 4409678..4410442 | + | 765 | WP_005163571.1 | PAS domain-containing protein | - |
| CH48_RS20245 () | 4410617..4411256 | - | 640 | Protein_3836 | IS3 family transposase ISYal1 | Transposase |
| CH48_RS20250 () | 4411357..4412574 | + | 1218 | WP_013649997.1 | phage tail tape measure protein | - |
| CH48_RS20255 () | 4412577..4413029 | + | 453 | WP_005163578.1 | phage tail protein | - |
| CH48_RS20260 () | 4413026..4414168 | + | 1143 | WP_013649998.1 | phage late control D family protein | - |
| CH48_RS22025 () | 4414261..4414482 | + | 222 | WP_071822716.1 | DNA-binding transcriptional regulator | - |
| CH48_RS20265 () | 4414567..4415382 | - | 816 | WP_005163581.1 | hypothetical protein | - |
| CH48_RS20270 () | 4415623..4416693 | + | 1071 | WP_201773596.1 | Tyrosine recombinase XerD | VF |
| - () | 4416749..4416867 | + | 119 | - | - | Antitoxin Detail |
| - () | 4416751..4416845 | - | 95 | - | - | Toxin Detail |
| CH48_RS20275 () | 4417020..4417361 | - | 342 | WP_005163587.1 | YebY family protein | - |
| CH48_RS20280 () | 4417458..4418342 | - | 885 | WP_005163602.1 | copper homeostasis membrane protein CopD | - |
| CH48_RS20285 () | 4418344..4418730 | - | 387 | WP_005170441.1 | CopC domain-containing protein YobA | - |
| CH48_RS20290 () | 4419123..4419632 | - | 510 | WP_013650000.1 | non-heme ferritin | - |
| CH48_RS20295 () | 4420016..4420249 | + | 234 | WP_004389928.1 | DNA polymerase III subunit theta | - |
| CH48_RS20300 () | 4420299..4421255 | - | 957 | WP_020283091.1 | prolyl aminopeptidase | - |
| CH48_RS20305 () | 4421765..4422427 | + | 663 | WP_013650001.1 | exodeoxyribonuclease X | - |
| CH48_RS20310 () | 4422439..4424493 | - | 2055 | WP_013650002.1 | prolyl oligopeptidase family serine peptidase | - |
| CH48_RS20315 () | 4424683..4425039 | - | 357 | WP_005163607.1 | protein YebF | - |
| CH48_RS20320 () | 4425145..4425453 | - | 309 | WP_005163608.1 | N(4)-acetylcytidine aminohydrolase | - |
| CH48_RS20325 () | 4425493..4425813 | - | 321 | WP_005163610.1 | YebG family protein | - |
| CH48_RS20330 () | 4425909..4427291 | - | 1383 | WP_013650003.1 | ATP-dependent RNA helicase DbpA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|