MGE detailed information
MGE type: Prophage MGE length: 43265 bp
Accession: NZ_CP009838 Location: 3758240..3801504 Organism: Yersinia enterocolitica strain 2516-87 Replicon: chromosome
Accession: NZ_CP009838 Location: 3758240..3801504 Organism: Yersinia enterocolitica strain 2516-87 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CH48_RS17075 () | 3753569..3753793 | - | 225 | WP_005160184.1 | DUF2594 family protein | - |
| CH48_RS17080 () | 3754487..3755143 | + | 657 | WP_042663914.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| CH48_RS17085 () | 3755136..3756968 | + | 1833 | WP_032904707.1 | excinuclease ABC subunit UvrC | - |
| CH48_RS17090 () | 3757027..3757575 | + | 549 | WP_005160174.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| CH48_RS17110 () | 3758240..3758455 | - | 216 | WP_013649733.1 | ogr/Delta-like zinc finger family protein | - |
| CH48_RS17115 () | 3758765..3759784 | + | 1020 | WP_020282800.1 | IS110 family transposase ISYen1 | Transposase |
| CH48_RS17120 () | 3760116..3761183 | - | 1068 | WP_042663916.1 | phage late control D family protein | - |
| CH48_RS17125 () | 3761155..3763786 | - | 2632 | Protein_3224 | phage tail tape measure protein | - |
| CH48_RS17130 () | 3763779..3763898 | - | 120 | WP_004705491.1 | GpE family phage tail protein | - |
| CH48_RS17135 () | 3763913..3764191 | - | 279 | WP_080366163.1 | phage tail assembly protein | - |
| CH48_RS17140 () | 3764337..3764852 | - | 516 | WP_013649736.1 | phage major tail tube protein | - |
| CH48_RS17145 () | 3764864..3766039 | - | 1176 | WP_042663918.1 | phage tail sheath protein | - |
| CH48_RS17150 () | 3766349..3766534 | - | 186 | WP_013649738.1 | hypothetical protein | - |
| CH48_RS22300 () | 3766668..3766806 | - | 139 | Protein_3230 | ash family protein | - |
| CH48_RS17155 () | 3767098..3767982 | - | 885 | WP_072077075.1 | hypothetical protein | VF |
| CH48_RS23035 () | 3768188..3768364 | - | 177 | WP_013649740.1 | hypothetical protein | VF |
| CH48_RS17160 () | 3768806..3769126 | - | 321 | WP_013649741.1 | hypothetical protein | - |
| CH48_RS17165 () | 3769116..3769322 | - | 207 | WP_013649742.1 | hypothetical protein | - |
| CH48_RS23040 () | 3769464..3769631 | + | 168 | WP_005161469.1 | hypothetical protein | - |
| CH48_RS17175 () | 3769703..3769963 | + | 261 | WP_005161466.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| CH48_RS17180 () | 3769970..3770248 | + | 279 | WP_042663920.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| CH48_RS21845 () | 3770301..3770913 | - | 613 | Protein_3238 | tail fiber assembly protein | - |
| CH48_RS17195 () | 3770913..3772205 | - | 1293 | WP_013649744.1 | phage tail protein | - |
| CH48_RS22955 () | 3772178..3772459 | - | 282 | WP_013649745.1 | phage tail protein | - |
| CH48_RS17205 () | 3772452..3772997 | - | 546 | WP_032904715.1 | phage tail protein I | - |
| CH48_RS17210 () | 3772990..3773898 | - | 909 | WP_013649747.1 | baseplate assembly protein | - |
| CH48_RS17215 () | 3773898..3774254 | - | 357 | WP_005161449.1 | GPW/gp25 family protein | - |
| CH48_RS17220 () | 3774251..3774886 | - | 636 | WP_013649748.1 | phage baseplate assembly protein V | - |
| CH48_RS17225 () | 3775023..3775295 | + | 273 | WP_005161438.1 | BrnT family toxin | - |
| CH48_RS17230 () | 3775276..3775566 | + | 291 | WP_005161435.1 | BrnA antitoxin family protein | - |
| CH48_RS17235 () | 3775632..3776693 | + | 1062 | WP_005161434.1 | toll/interleukin-1 receptor domain-containing protein | - |
| CH48_RS17240 () | 3776732..3777178 | - | 447 | WP_005161432.1 | phage virion morphogenesis protein | - |
| CH48_RS17245 () | 3777175..3777642 | - | 468 | WP_013649749.1 | phage tail protein | - |
| CH48_RS17250 () | 3777744..3778169 | - | 426 | WP_032904717.1 | Rz-like lysis system protein LysB | - |
| CH48_RS17255 () | 3778173..3778568 | - | 396 | WP_013649751.1 | M15 family metallopeptidase | - |
| CH48_RS17260 () | 3778555..3778734 | - | 180 | WP_013649752.1 | holin | - |
| CH48_RS21850 () | 3778719..3779030 | - | 312 | WP_071822708.1 | P2 family phage major capsid protein | - |
| CH48_RS22785 () | 3779009..3779672 | - | 664 | Protein_3254 | IS3 family transposase IS1400 | Transposase |
| CH48_RS21855 () | 3779859..3779958 | - | 100 | Protein_3255 | integrase | - |
| CH48_RS17275 () | 3779957..3780682 | - | 726 | Protein_3256 | MFS transporter | - |
| CH48_RS17280 () | 3780716..3781918 | - | 1203 | WP_005176946.1 | IS256 family transposase ISSod4 | Transposase |
| CH48_RS17285 () | 3781974..3782471 | - | 498 | Protein_3258 | MFS transporter | - |
| CH48_RS17290 () | 3782574..3783491 | + | 918 | WP_005161398.1 | LysR family transcriptional regulator | - |
| CH48_RS17295 () | 3784093..3784512 | - | 420 | WP_013649756.1 | helix-turn-helix domain-containing protein | - |
| CH48_RS17300 () | 3784913..3785557 | + | 645 | WP_005161394.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | VF |
| CH48_RS17310 () | 3786302..3786721 | + | 420 | WP_013649757.1 | antitermination protein Q | - |
| CH48_RS17315 () | 3786898..3787074 | - | 177 | WP_005161372.1 | GhoT/OrtT family toxin | - |
| CH48_RS17320 () | 3787301..3787477 | + | 177 | WP_005161370.1 | phage holin family protein | - |
| CH48_RS17325 () | 3787479..3787961 | + | 483 | WP_032904719.1 | lysozyme | - |
| CH48_RS17330 () | 3788334..3789218 | + | 885 | WP_005161363.1 | triacylglycerol lipase | - |
| CH48_RS17335 () | 3789520..3790176 | + | 657 | WP_005161358.1 | DUF533 domain-containing protein | - |
| CH48_RS17340 () | 3790283..3791167 | - | 885 | WP_013649759.1 | LysR family transcriptional regulator AmpR | - |
| CH48_RS17345 () | 3791302..3792468 | + | 1167 | WP_013649760.1 | class C beta-lactamase | - |
| CH48_RS17350 () | 3792615..3793706 | - | 1092 | WP_013649761.1 | Ribosome-binding ATPase YchF | VF |
| CH48_RS17355 () | 3793974..3794432 | + | 459 | WP_005161346.1 | hypothetical protein | - |
| CH48_RS17360 () | 3794487..3795080 | - | 594 | WP_013649762.1 | aminoacyl-tRNA hydrolase | - |
| CH48_RS17365 () | 3795412..3795684 | + | 273 | WP_005161340.1 | stress-induced protein YchH | - |
| CH48_RS17375 () | 3796171..3797118 | - | 948 | WP_004390739.1 | ribose-phosphate diphosphokinase | - |
| CH48_RS17380 () | 3797316..3798197 | - | 882 | WP_013649763.1 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase | - |
| CH48_RS17385 () | 3798199..3798822 | - | 624 | WP_013649764.1 | lipoprotein insertase outer membrane protein LolB | - |
| CH48_RS17390 () | 3799128..3800390 | + | 1263 | WP_013649765.1 | glutamyl-tRNA reductase | - |
| CH48_RS17395 () | 3800422..3801504 | + | 1083 | WP_005161322.1 | peptide chain release factor 1 | - |
| CH48_RS17400 () | 3801504..3802358 | + | 855 | WP_005161319.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| CH48_RS17405 () | 3802376..3802777 | + | 402 | WP_013649766.1 | SirB2 family protein | - |
| CH48_RS17410 () | 3802774..3803583 | + | 810 | WP_005161315.1 | invasion regulator SirB1 | - |
| CH48_RS17415 () | 3803728..3804582 | + | 855 | WP_005161312.1 | 3-deoxy-8-phosphooctulonate synthase | - |
| CH48_RS17420 () | 3804656..3806356 | - | 1701 | Protein_3283 | C4-dicarboxylic acid transporter DauA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|