MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 69701 bp
Accession: NZ_CP009837 Location: 1..69701 Organism: Yersinia enterocolitica strain 2516-87 Replicon: plasmid pCD
Accession: NZ_CP009837 Location: 1..69701 Organism: Yersinia enterocolitica strain 2516-87 Replicon: plasmid pCD
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CH48_RS00010 () | 687..2876 | - | 2190 | WP_010891198.1 | Protein kinase YpkA | VF |
| CH48_RS00015 () | 2884..3351 | - | 468 | WP_010891197.1 | hypothetical protein | VF |
| CH48_RS00020 () | 3533..4078 | + | 546 | WP_010891196.1 | hypothetical protein | - |
| CH48_RS00025 () | 5101..5979 | - | 879 | WP_162467786.1 | incFII family plasmid replication initiator RepA | - |
| CH48_RS20920 () | 5960..6034 | - | 75 | WP_071598612.1 | RepA leader peptide Tap | - |
| CH48_RS00030 () | 6276..6530 | - | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| CH48_RS00035 () | 6668..7213 | - | 546 | WP_032904936.1 | Phospholipase D | VF |
| CH48_RS22340 () | 7356..8519 | - | 1164 | Protein_8 | IS3 family transposase | - |
| CH48_RS00045 () | 8574..8906 | - | 333 | WP_010891249.1 | hypothetical protein | - |
| CH48_RS00050 () | 8903..9226 | - | 324 | Protein_10 | DUF2726 domain-containing protein | - |
| CH48_RS22345 () | 9244..9381 | + | 138 | Protein_11 | transposase | - |
| CH48_RS00060 () | 9450..10538 | + | 1089 | Protein_12 | IS3 family transposase | - |
| CH48_RS00065 () | 10506..11031 | - | 526 | Protein_13 | Multifunctional conjugation protein TraI | Relaxase |
| CH48_RS00070 () | 11171..11869 | - | 699 | WP_013749490.1 | arsenic resistance NADPH-dependent reductase ArsH | - |
| CH48_RS00075 () | 11955..12275 | + | 321 | WP_013749489.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| CH48_RS00080 () | 12321..13610 | + | 1290 | WP_010891245.1 | arsenite efflux transporter membrane subunit ArsB | - |
| CH48_RS00085 () | 13623..14048 | + | 426 | WP_010891244.1 | glutaredoxin-dependent arsenate reductase | - |
| CH48_RS00090 () | 14066..14647 | - | 582 | WP_010891243.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| CH48_RS00095 () | 14808..15659 | + | 852 | WP_010891242.1 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| CH48_RS00100 () | 15815..16267 | + | 453 | WP_010891241.1 | PprA | - |
| CH48_RS00105 () | 16589..17464 | - | 876 | WP_013749484.1 | DMT family transporter | - |
| CH48_RS00110 () | 17534..18901 | - | 1368 | WP_013749483.1 | Adhesin YadA | VF |
| CH48_RS22060 () | 19510..20059 | + | 550 | Protein_23 | transposase family protein | - |
| CH48_RS00120 () | 20155..20988 | - | 834 | Protein_24 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CH48_RS00125 () | 21161..21511 | - | 351 | WP_016266427.1 | Yop proteins translocation protein M | VF |
| CH48_RS00135 () | 21646..22734 | - | 1089 | Protein_26 | IS3 family transposase | - |
| CH48_RS00145 () | 23047..23265 | + | 219 | WP_013749479.1 | hypothetical protein | - |
| CH48_RS00150 () | 23326..23796 | - | 471 | WP_010891240.1 | IS481 family transposase ISAzs36 | Transposase |
| CH48_RS00155 () | 24412..25578 | + | 1167 | WP_010891239.1 | Sporulation initiation inhibitor protein Soj | VF |
| CH48_RS00160 () | 25575..26540 | + | 966 | WP_010891238.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| CH48_RS22065 () | 26965..27257 | + | 293 | Protein_31 | IS6 family transposase ISEas1 | Transposase |
| CH48_RS00165 () | 27423..27665 | + | 243 | WP_005176524.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| CH48_RS00170 () | 27658..27957 | + | 300 | WP_013749473.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CH48_RS00175 () | 28097..28756 | - | 660 | WP_010891237.1 | Outer membrane virulence protein YopE | VF |
| CH48_RS00180 () | 28949..29341 | + | 393 | WP_010891236.1 | YopE regulator | VF |
| CH48_RS22070 () | 29576..30748 | + | 1173 | Protein_36 | IS3 family transposase | - |
| CH48_RS00195 () | 30952..31377 | + | 426 | WP_010891235.1 | hypothetical protein | VF |
| CH48_RS00200 () | 31605..33011 | - | 1407 | WP_010891234.1 | Tyrosine-protein phosphatase YopH | VF |
| CH48_RS00205 () | 33696..34043 | - | 348 | WP_005176491.1 | Yop proteins translocation protein M | VF |
| CH48_RS00210 () | 34262..34933 | - | 672 | WP_010891233.1 | Yop proteins translocation protein L | VF |
| CH48_RS00215 () | 34879..35508 | - | 630 | WP_010891232.1 | Yop proteins translocation protein K | VF |
| CH48_RS00220 () | 35508..36242 | - | 735 | WP_005176483.1 | Yop proteins translocation lipoprotein J | VF |
| CH48_RS00225 () | 36249..36596 | - | 348 | WP_010891231.1 | Yop proteins translocation protein I | VF |
| CH48_RS00230 () | 36597..37094 | - | 498 | WP_010891230.1 | Yop proteins translocation protein H | VF |
| CH48_RS00235 () | 37091..37438 | - | 348 | WP_010891229.1 | Putative Yop proteins translocation protein G | VF |
| CH48_RS00240 () | 37440..37703 | - | 264 | WP_010891228.1 | Yop proteins translocation protein F | VF |
| CH48_RS00245 () | 37704..37904 | - | 201 | WP_010891227.1 | Putative Yop proteins translocation protein E | VF |
| CH48_RS00250 () | 37901..39157 | - | 1257 | WP_010891226.1 | Yop proteins translocation protein D | VF |
| CH48_RS00255 () | 39154..40977 | - | 1824 | WP_010891225.1 | Yop proteins translocation protein C | VF |
| CH48_RS00260 () | 40983..41396 | - | 414 | WP_010891224.1 | Chaperone protein YscB | VF |
| CH48_RS00265 () | 41622..41720 | - | 99 | WP_010891223.1 | type III secretion system protein YscA | - |
| CH48_RS00270 () | 41799..42614 | - | 816 | WP_010891222.1 | Virulence regulon transcriptional activator VirF | VF |
| CH48_RS00275 () | 42738..43133 | - | 396 | WP_042663565.1 | Exoenzyme S synthesis protein B | VF |
| CH48_RS00280 () | 43709..44773 | - | 1065 | WP_010891221.1 | Yop proteins translocation protein U | VF |
| CH48_RS00285 () | 44773..45558 | - | 786 | WP_013749462.1 | Surface presentation of antigens protein SpaR | VF |
| CH48_RS00290 () | 45555..45821 | - | 267 | WP_002212945.1 | hypothetical protein | VF |
| CH48_RS00295 () | 45823..46476 | - | 654 | WP_005176829.1 | Surface presentation of antigens protein SpaP | VF |
| CH48_RS00300 () | 46473..47396 | - | 924 | WP_005176825.1 | Yop proteins translocation protein Q | VF |
| CH48_RS00305 () | 47393..48940 | - | 1548 | WP_010891219.1 | hypothetical protein | VF |
| CH48_RS00310 () | 48940..49404 | - | 465 | WP_013749460.1 | Yop proteins translocation protein O | VF |
| CH48_RS00315 () | 49401..50719 | - | 1319 | Protein_61 | putative ATP synthase YscN | VF |
| CH48_RS00320 () | 50917..51798 | + | 882 | WP_010891216.1 | Outer membrane protein YopN | VF |
| CH48_RS00325 () | 51779..52057 | + | 279 | WP_002212965.1 | Protein TyeA | VF |
| CH48_RS00330 () | 52044..52415 | + | 372 | WP_010891215.1 | Chaperone protein SycN | VF |
| CH48_RS00335 () | 52412..52780 | + | 369 | WP_010891214.1 | Yop proteins translocation protein X | VF |
| CH48_RS00340 () | 52777..53121 | + | 345 | WP_002229791.1 | Chaperone protein YscY | VF |
| CH48_RS00345 () | 53108..55222 | + | 2115 | WP_013749457.1 | Invasion protein InvA | VF |
| CH48_RS00350 () | 55219..55659 | + | 441 | WP_010891212.1 | hypothetical protein | VF |
| CH48_RS00355 () | 55701..55988 | + | 288 | WP_010891211.1 | hypothetical protein | VF |
| CH48_RS00360 () | 55990..56964 | + | 975 | WP_042663571.1 | Virulence-associated V antigen | VF |
| CH48_RS00365 () | 56967..57473 | + | 507 | WP_010891209.1 | Chaperone protein IpgC | VF |
| CH48_RS00370 () | 57451..58656 | + | 1206 | WP_013749455.1 | Protein YopB | VF |
| CH48_RS00375 () | 58675..59595 | + | 921 | WP_010891207.1 | Protein YopD | VF |
| CH48_RS22350 () | 59820..60326 | + | 507 | Protein_74 | transposase | - |
| CH48_RS00390 () | 60369..61472 | - | 1104 | WP_010891206.1 | Outer membrane protein YopM | VF |
| CH48_RS22355 () | 62247..62533 | + | 287 | Protein_76 | DDE-type integrase/transposase/recombinase | - |
| CH48_RS22965 () | 62833..62970 | + | 138 | WP_002212997.1 | hypothetical protein | - |
| CH48_RS00410 () | 63146..64235 | - | 1090 | Protein_78 | IS3 family transposase | - |
| CH48_RS22360 () | 64307..64464 | - | 158 | Protein_79 | DDE-type integrase/transposase/recombinase | - |
| CH48_RS00420 () | 64870..65262 | - | 393 | WP_010891204.1 | Chaperone protein SycT | VF |
| CH48_RS00425 () | 65262..66230 | - | 969 | WP_010891203.1 | Cysteine protease YopT | VF |
| CH48_RS00430 () | 66751..67299 | + | 549 | WP_010891202.1 | hypothetical protein | VF |
| CH48_RS22365 () | 67458..67744 | + | 287 | Protein_83 | IS3 family transposase | - |
| CH48_RS00440 () | 67901..68517 | + | 617 | Protein_84 | complement resistance protein TraT | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|