MGE detailed information
MGE type: Prophage MGE length: 49914 bp
Accession: NZ_CP009829 Location: 2424784..2474697 Organism: Xylella fastidiosa strain 3124 Replicon: chromosome
Accession: NZ_CP009829 Location: 2424784..2474697 Organism: Xylella fastidiosa strain 3124 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XFC3_RS11040 () | 2420507..2420911 | + | 405 | WP_010893272.1 | H-NS histone family protein | - |
| XFC3_RS11045 () | 2421697..2422752 | - | 1056 | WP_010893271.1 | 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM | - |
| XFC3_RS11050 () | 2423736..2423879 | + | 144 | WP_023908099.1 | hypothetical protein | - |
| XFC3_RS11060 () | 2424447..2424803 | - | 357 | WP_031337099.1 | MerR family transcriptional regulator | - |
| XFC3_RS11065 () | 2424784..2425083 | - | 300 | WP_010893266.1 | integration host factor subunit alpha | - |
| XFC3_RS11070 () | 2425107..2427485 | - | 2379 | WP_023906998.1 | phenylalanine--tRNA ligase subunit beta | - |
| XFC3_RS11075 () | 2427569..2428570 | - | 1002 | WP_010893264.1 | phenylalanine--tRNA ligase subunit alpha | - |
| XFC3_RS11080 () | 2428842..2429201 | - | 360 | WP_010893263.1 | 50S ribosomal protein L20 | - |
| XFC3_RS11085 () | 2429212..2429409 | - | 198 | WP_004090402.1 | 50S ribosomal protein L35 | - |
| XFC3_RS11090 () | 2429670..2430197 | - | 528 | WP_075584689.1 | translation initiation factor IF-3 | - |
| XFC3_RS11095 () | 2430265..2432172 | - | 1908 | WP_010893260.1 | threonine--tRNA ligase | - |
| XFC3_RS11100 () | 2433263..2434345 | - | 1083 | WP_023907001.1 | phage late control D family protein | - |
| XFC3_RS11105 () | 2434336..2434554 | - | 219 | WP_023906711.1 | tail protein X | - |
| XFC3_RS11110 () | 2434551..2435033 | - | 483 | WP_088572654.1 | phage tail protein | - |
| XFC3_RS11115 () | 2435030..2437249 | - | 2220 | WP_023907767.1 | phage tail tape measure protein | - |
| XFC3_RS11120 () | 2437376..2437663 | - | 288 | WP_023907766.1 | phage tail assembly protein | - |
| XFC3_RS11125 () | 2437666..2438175 | - | 510 | WP_023907765.1 | phage major tail tube protein | - |
| XFC3_RS11130 () | 2438175..2439353 | - | 1179 | WP_023907007.1 | phage tail sheath family protein | - |
| XFC3_RS11135 () | 2439418..2441010 | - | 1593 | WP_023907008.1 | tail fiber domain-containing protein | - |
| XFC3_RS11140 () | 2441018..2441575 | - | 558 | WP_023907009.1 | phage tail protein I | - |
| XFC3_RS11145 () | 2441568..2442461 | - | 894 | WP_023907762.1 | baseplate J/gp47 family protein | - |
| XFC3_RS11150 () | 2442461..2442799 | - | 339 | WP_088372106.1 | GPW/gp25 family protein | - |
| XFC3_RS11155 () | 2443017..2443319 | + | 303 | WP_010894925.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| XFC3_RS11160 () | 2443322..2443726 | + | 405 | WP_088572655.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| XFC3_RS11165 () | 2443795..2444382 | - | 588 | WP_023907016.1 | phage baseplate assembly protein V | - |
| XFC3_RS11170 () | 2444379..2444921 | - | 543 | WP_023907017.1 | hypothetical protein | - |
| XFC3_RS11175 () | 2444897..2445418 | - | 522 | WP_088572623.1 | hypothetical protein | - |
| XFC3_RS11180 () | 2445415..2445738 | - | 324 | WP_031336752.1 | hypothetical protein | - |
| XFC3_RS11185 () | 2445738..2445998 | - | 261 | WP_010893239.1 | hypothetical protein | - |
| XFC3_RS11190 () | 2446016..2447896 | - | 1881 | WP_023907020.1 | phage major capsid protein | - |
| XFC3_RS11195 () | 2447880..2449478 | - | 1599 | WP_023907758.1 | phage portal protein | - |
| XFC3_RS11200 () | 2449475..2450023 | - | 549 | WP_023907757.1 | hypothetical protein | - |
| XFC3_RS11205 () | 2450027..2451979 | - | 1953 | WP_088572622.1 | phage terminase large subunit family protein | - |
| XFC3_RS11210 () | 2451972..2452565 | - | 594 | WP_023907024.1 | terminase small subunit | - |
| XFC3_RS11215 () | 2452696..2452989 | - | 294 | WP_173406035.1 | hypothetical protein | - |
| XFC3_RS11220 () | 2452922..2453383 | - | 462 | WP_031338053.1 | hypothetical protein | - |
| XFC3_RS11225 () | 2453373..2453702 | - | 330 | WP_031338054.1 | phage holin family protein | - |
| XFC3_RS11230 () | 2453695..2454189 | - | 495 | WP_023907027.1 | lysozyme | - |
| XFC3_RS11235 () | 2454156..2454773 | - | 618 | WP_088572670.1 | hypothetical protein | - |
| XFC3_RS11240 () | 2455476..2458007 | - | 2532 | WP_023907052.1 | primase | - |
| XFC3_RS11245 () | 2458141..2458923 | - | 783 | WP_023907051.1 | Bro-N domain-containing protein | - |
| XFC3_RS11250 () | 2459711..2459956 | - | 246 | WP_023907050.1 | hypothetical protein | - |
| XFC3_RS11255 () | 2460017..2460265 | - | 249 | WP_010894932.1 | hypothetical protein | - |
| XFC3_RS11260 () | 2460262..2460450 | - | 189 | WP_010894933.1 | hypothetical protein | - |
| XFC3_RS11265 () | 2460504..2460728 | - | 225 | WP_051372715.1 | hypothetical protein | - |
| XFC3_RS11270 () | 2460830..2461135 | + | 306 | WP_023907048.1 | hypothetical protein | - |
| XFC3_RS11275 () | 2461132..2461332 | - | 201 | WP_031338060.1 | Rha family transcriptional regulator | - |
| XFC3_RS11280 () | 2461406..2462176 | + | 771 | WP_010894935.1 | helix-turn-helix transcriptional regulator | - |
| XFC3_RS11285 () | 2462345..2462884 | + | 540 | WP_010894936.1 | hypothetical protein | - |
| XFC3_RS11290 () | 2462921..2463232 | + | 312 | WP_052262873.1 | hypothetical protein | - |
| XFC3_RS11295 () | 2463422..2463811 | + | 390 | WP_088572656.1 | hypothetical protein | - |
| XFC3_RS11300 () | 2463808..2464209 | + | 402 | WP_023907044.1 | hypothetical protein | - |
| XFC3_RS11305 () | 2464209..2464610 | + | 402 | WP_010893215.1 | hypothetical protein | - |
| XFC3_RS11310 () | 2464607..2464801 | + | 195 | WP_010893214.1 | hypothetical protein | - |
| XFC3_RS11315 () | 2464833..2465027 | + | 195 | WP_023907043.1 | hypothetical protein | - |
| XFC3_RS11320 () | 2465027..2465518 | + | 492 | WP_023907042.1 | hypothetical protein | - |
| XFC3_RS11325 () | 2465515..2466729 | + | 1215 | Protein_2217 | DUF2800 domain-containing protein | - |
| XFC3_RS11330 () | 2466792..2467358 | + | 567 | WP_023907040.1 | DUF2815 family protein | - |
| XFC3_RS11335 () | 2467430..2468935 | + | 1506 | WP_199251108.1 | hypothetical protein | - |
| XFC3_RS11340 () | 2468937..2471101 | + | 2165 | Protein_2220 | DNA polymerase | - |
| XFC3_RS11345 () | 2471098..2471376 | + | 279 | WP_023907054.1 | VRR-NUC domain-containing protein | - |
| XFC3_RS11350 () | 2471378..2471773 | - | 396 | WP_010894949.1 | hypothetical protein | - |
| XFC3_RS11355 () | 2471858..2473276 | + | 1419 | WP_010894950.1 | DEAD/DEAH box helicase | - |
| XFC3_RS11360 () | 2473273..2473437 | + | 165 | WP_010894951.1 | hypothetical protein | - |
| XFC3_RS11365 () | 2473430..2473678 | + | 249 | WP_023907056.1 | DUF4224 domain-containing protein | - |
| XFC3_RS11370 () | 2473678..2474697 | + | 1020 | WP_010894952.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| XFC3_RS11375 () | 2475018..2475296 | + | 279 | WP_010894953.1 | hypothetical protein | - |
| XFC3_RS11380 () | 2476423..2477287 | + | 865 | Protein_2228 | 30S ribosomal protein S6--L-glutamate ligase | - |
| XFC3_RS11385 () | 2477973..2478650 | + | 678 | WP_010894955.1 | response regulator transcription factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|