MGE detailed information
MGE type: Prophage MGE length: 64643 bp
Accession: NZ_CP009826 Location: 2102564..2167206 Organism: Xylella fastidiosa strain Pr8x Replicon: chromosome
Accession: NZ_CP009826 Location: 2102564..2167206 Organism: Xylella fastidiosa strain Pr8x Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XFPR_RS09545 () | 2098520..2098888 | + | 369 | WP_023906874.1 | hypothetical protein | - |
| XFPR_RS09550 () | 2099261..2100898 | + | 1638 | WP_023907957.1 | PAS-domain containing protein | - |
| XFPR_RS09555 () | 2100935..2101567 | - | 633 | WP_010893491.1 | response regulator transcription factor | - |
| XFPR_RS09560 () | 2102143..2102313 | + | 171 | WP_155114986.1 | hypothetical protein | - |
| XFPR_RS09565 () | 2102388..2102711 | + | 324 | WP_031336968.1 | hypothetical protein | - |
| XFPR_RS09570 () | 2102990..2103740 | + | 751 | Protein_1870 | Tyrosine recombinase XerC ; Integrase | Integrase |
| XFPR_RS09575 () | 2103718..2104050 | - | 333 | WP_023907958.1 | DNA-binding transcriptional regulator | - |
| XFPR_RS09580 () | 2104455..2105003 | + | 549 | WP_023907959.1 | SocA family protein | - |
| XFPR_RS09585 () | 2104936..2105559 | + | 624 | WP_143704186.1 | hypothetical protein | - |
| XFPR_RS09590 () | 2105573..2105800 | + | 228 | WP_023907961.1 | hypothetical protein | - |
| XFPR_RS09595 () | 2105801..2106964 | - | 1164 | WP_023907962.1 | phage tail protein | - |
| XFPR_RS09600 () | 2106968..2107528 | - | 561 | WP_023907963.1 | DUF2612 domain-containing protein | - |
| XFPR_RS09605 () | 2107525..2108670 | - | 1146 | WP_023907964.1 | baseplate J/gp47 family protein | - |
| XFPR_RS09610 () | 2108763..2109116 | - | 354 | WP_023906519.1 | hypothetical protein | - |
| XFPR_RS09615 () | 2109113..2109754 | - | 642 | WP_023907965.1 | hypothetical protein | - |
| XFPR_RS09620 () | 2109751..2110581 | - | 831 | WP_060870491.1 | hypothetical protein | - |
| XFPR_RS09625 () | 2110578..2110895 | - | 318 | WP_023906522.1 | hypothetical protein | - |
| XFPR_RS09630 () | 2110895..2111665 | - | 771 | WP_023906523.1 | hypothetical protein | - |
| XFPR_RS09635 () | 2111826..2112098 | + | 273 | WP_023906524.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| XFPR_RS09640 () | 2112107..2112499 | + | 393 | WP_023906525.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XFPR_RS09645 () | 2112518..2114407 | - | 1890 | WP_088572706.1 | hypothetical protein | - |
| XFPR_RS09650 () | 2114555..2114977 | - | 423 | WP_023907971.1 | hypothetical protein | - |
| XFPR_RS09655 () | 2114974..2115411 | - | 438 | WP_023907683.1 | DUF3277 family protein | - |
| XFPR_RS09660 () | 2115421..2116918 | - | 1498 | Protein_1888 | DUF3383 domain-containing protein | - |
| XFPR_RS09665 () | 2116919..2117452 | - | 534 | WP_196432182.1 | hypothetical protein | - |
| XFPR_RS09670 () | 2117376..2117756 | - | 381 | WP_023907686.1 | hypothetical protein | - |
| XFPR_RS09675 () | 2117731..2118210 | - | 480 | WP_023907687.1 | hypothetical protein | - |
| XFPR_RS09680 () | 2118207..2118578 | - | 372 | WP_023907688.1 | DUF4054 domain-containing protein | - |
| XFPR_RS09685 () | 2118581..2118880 | - | 300 | WP_023907689.1 | hypothetical protein | - |
| XFPR_RS09690 () | 2118945..2119928 | - | 984 | WP_023907690.1 | DUF2184 domain-containing protein | - |
| XFPR_RS09695 () | 2119938..2120420 | - | 483 | WP_023906534.1 | hypothetical protein | - |
| XFPR_RS09700 () | 2120448..2121638 | - | 1191 | WP_031336687.1 | DUF2213 domain-containing protein | - |
| XFPR_RS09705 () | 2121638..2122483 | - | 846 | WP_023907692.1 | phage head morphogenesis protein | - |
| XFPR_RS09710 () | 2122556..2122894 | + | 339 | WP_023907693.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| XFPR_RS09715 () | 2122891..2123172 | + | 282 | WP_023907694.1 | helix-turn-helix domain-containing protein | - |
| XFPR_RS09720 () | 2123221..2124609 | - | 1389 | WP_196432183.1 | DUF1073 domain-containing protein | - |
| XFPR_RS09725 () | 2124606..2126156 | - | 1551 | WP_088572612.1 | phage terminase large subunit | - |
| XFPR_RS09730 () | 2126107..2126505 | - | 399 | WP_023907983.1 | hypothetical protein | - |
| XFPR_RS09735 () | 2126596..2126808 | - | 213 | Protein_1903 | hypothetical protein | - |
| XFPR_RS09740 () | 2126810..2127271 | - | 462 | WP_023907984.1 | hypothetical protein | - |
| XFPR_RS09745 () | 2127261..2127590 | - | 330 | WP_010894063.1 | phage holin family protein | - |
| XFPR_RS09750 () | 2127583..2128080 | - | 498 | WP_023907985.1 | lysozyme | - |
| XFPR_RS09755 () | 2128183..2128914 | - | 732 | WP_023907986.1 | site-specific DNA-methyltransferase | - |
| XFPR_RS09760 () | 2129003..2129701 | - | 699 | WP_031336983.1 | hypothetical protein | - |
| XFPR_RS09765 () | 2129721..2130134 | - | 414 | WP_196432184.1 | hypothetical protein | - |
| XFPR_RS09770 () | 2130131..2130895 | - | 765 | WP_196432185.1 | hypothetical protein | - |
| XFPR_RS09775 () | 2130801..2131652 | - | 852 | WP_023907989.1 | YdaU family protein | - |
| XFPR_RS09780 () | 2131696..2131986 | - | 291 | WP_023907990.1 | hypothetical protein | - |
| XFPR_RS09785 () | 2132107..2133219 | - | 1113 | WP_031336988.1 | Bro-N domain-containing protein | - |
| XFPR_RS09790 () | 2133422..2133805 | - | 384 | WP_023907991.1 | hypothetical protein | - |
| XFPR_RS09795 () | 2133802..2134050 | - | 249 | WP_031336990.1 | hypothetical protein | - |
| XFPR_RS09800 () | 2134047..2134235 | - | 189 | WP_023907993.1 | hypothetical protein | - |
| XFPR_RS09805 () | 2134296..2134577 | - | 282 | WP_023907994.1 | hypothetical protein | - |
| XFPR_RS09810 () | 2134679..2135050 | + | 372 | WP_023907996.1 | hypothetical protein | - |
| XFPR_RS09815 () | 2135230..2135475 | - | 246 | WP_023907997.1 | hypothetical protein | - |
| XFPR_RS09820 () | 2135474..2136253 | + | 780 | WP_023907998.1 | helix-turn-helix transcriptional regulator | - |
| XFPR_RS09825 () | 2136304..2136915 | - | 612 | WP_023907999.1 | Fic/DOC family protein | Toxin Detail |
| XFPR_RS09830 () | 2136912..2137100 | - | 189 | WP_004087046.1 | antitoxin VbhA family protein | Antitoxin Detail |
| XFPR_RS09835 () | 2137502..2137906 | + | 405 | Protein_1923 | hypothetical protein | - |
| XFPR_RS09840 () | 2138227..2138685 | + | 459 | WP_023908001.1 | hypothetical protein | - |
| XFPR_RS09845 () | 2138685..2139086 | + | 402 | WP_023908002.1 | hypothetical protein | - |
| XFPR_RS09850 () | 2139083..2139274 | + | 192 | WP_023908003.1 | hypothetical protein | - |
| XFPR_RS09855 () | 2139318..2139845 | + | 528 | WP_075584676.1 | hypothetical protein | - |
| XFPR_RS09860 () | 2139964..2140155 | + | 192 | WP_023908006.1 | hypothetical protein | - |
| XFPR_RS09865 () | 2140176..2140550 | + | 375 | WP_023908007.1 | hypothetical protein | - |
| XFPR_RS09870 () | 2140570..2141391 | + | 822 | WP_023908008.1 | YfdQ family protein | - |
| XFPR_RS09875 () | 2141407..2142333 | + | 927 | WP_023908009.1 | phage recombination protein Bet | - |
| XFPR_RS09880 () | 2142330..2143973 | + | 1644 | WP_023908010.1 | YqaJ viral recombinase family protein | - |
| XFPR_RS09885 () | 2144066..2144320 | + | 255 | Protein_1933 | hypothetical protein | - |
| XFPR_RS09890 () | 2144324..2145112 | + | 789 | WP_031337033.1 | Bro-N domain-containing protein | - |
| XFPR_RS09895 () | 2145109..2145822 | + | 714 | WP_023906569.1 | phage antirepressor KilAC domain-containing protein | - |
| XFPR_RS09900 () | 2145880..2146332 | + | 453 | WP_023908011.1 | single-stranded DNA-binding protein | - |
| XFPR_RS09905 () | 2146569..2147762 | + | 1194 | WP_081378028.1 | tyrosine-type recombinase/integrase | - |
| XFPR_RS09915 () | 2147894..2149903 | - | 2010 | WP_010893486.1 | excinuclease ABC subunit UvrB | - |
| XFPR_RS09920 () | 2150059..2150616 | + | 558 | WP_010893485.1 | Tfp pilus assembly protein FimT/FimU | - |
| XFPR_RS09925 () | 2151082..2151588 | - | 507 | WP_027700520.1 | hypothetical protein | - |
| XFPR_RS09930 () | 2151608..2152516 | - | 909 | WP_010893482.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| XFPR_RS09935 () | 2152669..2153244 | + | 576 | WP_088372218.1 | glycine cleavage system protein R | - |
| XFPR_RS09940 () | 2153291..2153770 | + | 480 | WP_010893480.1 | peroxiredoxin | - |
| XFPR_RS09945 () | 2153835..2155235 | + | 1401 | Protein_1944 | PhoH family protein | - |
| XFPR_RS09950 () | 2155605..2155829 | - | 225 | WP_010893476.1 | hypothetical protein | - |
| XFPR_RS09955 () | 2155826..2156125 | - | 300 | WP_023908012.1 | hypothetical protein | - |
| XFPR_RS09960 () | 2156539..2157513 | - | 975 | WP_023908014.1 | thiamine-phosphate kinase | - |
| XFPR_RS09965 () | 2157604..2158077 | - | 474 | WP_010893474.1 | transcription antitermination factor NusB | - |
| XFPR_RS09970 () | 2158074..2158538 | - | 465 | WP_010893473.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
| XFPR_RS09975 () | 2158568..2159701 | - | 1134 | WP_023908015.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| XFPR_RS09980 () | 2159698..2160300 | - | 603 | WP_023908016.1 | riboflavin synthase | - |
| XFPR_RS09985 () | 2160888..2161982 | - | 1095 | WP_010893469.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| XFPR_RS09990 () | 2162408..2162953 | - | 546 | WP_023908017.1 | transcriptional regulator NrdR | - |
| XFPR_RS09995 () | 2162981..2163478 | - | 498 | WP_010893466.1 | hypothetical protein | - |
| XFPR_RS10000 () | 2163607..2164860 | - | 1254 | WP_031337004.1 | serine hydroxymethyltransferase | - |
| XFPR_RS10005 () | 2165542..2167206 | + | 1665 | WP_010893463.1 | energy-dependent translational throttle protein EttA | - |
| XFPR_RS10010 () | 2167763..2169451 | + | 1689 | WP_023908019.1 | malate dehydrogenase (quinone) | - |
| XFPR_RS10015 () | 2169616..2170050 | - | 435 | WP_042463617.1 | thiol-disulfide oxidoreductase DCC family protein | - |
| XFPR_RS10020 () | 2170578..2171360 | - | 783 | WP_023908021.1 | peptidoglycan editing factor PgeF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|