MGE detailed information
MGE type: Prophage MGE length: 42598 bp
Accession: NZ_CP009823 Location: 2473129..2515726 Organism: Xylella fastidiosa strain J1a12 Replicon: chromosome
Accession: NZ_CP009823 Location: 2473129..2515726 Organism: Xylella fastidiosa strain J1a12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OY18_RS12210 (OY18_11470) | 2468233..2469234 | - | 1002 | WP_010893264.1 | phenylalanine--tRNA ligase subunit alpha | - |
| OY18_RS12215 (OY18_11475) | 2469506..2469865 | - | 360 | WP_010893263.1 | 50S ribosomal protein L20 | - |
| OY18_RS12220 (OY18_11480) | 2469876..2470073 | - | 198 | WP_004090402.1 | 50S ribosomal protein L35 | - |
| OY18_RS12225 (OY18_11485) | 2470333..2470860 | - | 528 | WP_075584689.1 | translation initiation factor IF-3 | - |
| OY18_RS12230 (OY18_11490) | 2470928..2472835 | - | 1908 | WP_010893260.1 | threonine--tRNA ligase | - |
| OY18_RS15430 | 2472901..2473035 | - | 135 | WP_268233762.1 | hypothetical protein | - |
| OY18_RS12240 (OY18_11505) | 2473926..2475008 | - | 1083 | WP_088569718.1 | phage late control D family protein | - |
| OY18_RS12245 (OY18_11510) | 2474999..2475217 | - | 219 | WP_060872013.1 | tail protein X | - |
| OY18_RS12250 (OY18_11515) | 2475214..2475696 | - | 483 | WP_088569685.1 | phage tail protein | - |
| OY18_RS12255 (OY18_11520) | 2475693..2477948 | - | 2256 | WP_229926299.1 | phage tail tape measure protein | - |
| OY18_RS12260 (OY18_11525) | 2478039..2478326 | - | 288 | WP_060871909.1 | phage tail assembly protein | - |
| OY18_RS12265 (OY18_11530) | 2478329..2478838 | - | 510 | WP_010893252.1 | phage major tail tube protein | - |
| OY18_RS12270 (OY18_11535) | 2478838..2480016 | - | 1179 | WP_060871908.1 | phage tail sheath family protein | - |
| OY18_RS12275 (OY18_11540) | 2480081..2481673 | - | 1593 | WP_060871907.1 | tail fiber domain-containing protein | - |
| OY18_RS12280 (OY18_11545) | 2481681..2482238 | - | 558 | WP_060872396.1 | phage tail protein I | - |
| OY18_RS12285 (OY18_11550) | 2482231..2483124 | - | 894 | WP_088569719.1 | baseplate J/gp47 family protein | - |
| OY18_RS12290 (OY18_11555) | 2483124..2483447 | - | 324 | WP_228762820.1 | GPW/gp25 family protein | - |
| OY18_RS12295 (OY18_11560) | 2483634..2483951 | + | 318 | WP_010893245.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OY18_RS12300 (OY18_11565) | 2483962..2484237 | + | 276 | WP_010893244.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| OY18_RS12305 (OY18_11570) | 2484242..2484829 | - | 588 | WP_060871767.1 | phage baseplate assembly protein V | - |
| OY18_RS12310 (OY18_11575) | 2484826..2485368 | - | 543 | WP_060872403.1 | hypothetical protein | - |
| OY18_RS12315 (OY18_11580) | 2485344..2485865 | - | 522 | WP_010893241.1 | hypothetical protein | - |
| OY18_RS12320 (OY18_11585) | 2485862..2486185 | - | 324 | WP_042462902.1 | hypothetical protein | - |
| OY18_RS12325 (OY18_11590) | 2486185..2486445 | - | 261 | WP_060872391.1 | hypothetical protein | - |
| OY18_RS12330 (OY18_11595) | 2486463..2488343 | - | 1881 | WP_088569720.1 | phage major capsid protein | - |
| OY18_RS15260 | 2488327..2488866 | - | 540 | Protein_2295 | phage portal protein | - |
| OY18_RS15265 | 2488763..2489800 | - | 1038 | WP_229926360.1 | phage portal protein | - |
| OY18_RS12340 (OY18_11605) | 2489923..2490474 | - | 552 | WP_088569677.1 | hypothetical protein | - |
| OY18_RS12345 (OY18_11610) | 2490478..2492430 | - | 1953 | WP_088569676.1 | phage terminase large subunit family protein | - |
| OY18_RS12350 (OY18_11615) | 2492423..2492962 | - | 540 | WP_088569675.1 | terminase small subunit | - |
| OY18_RS12355 (OY18_11620) | 2493135..2493428 | - | 294 | WP_173406035.1 | hypothetical protein | - |
| OY18_RS12360 (OY18_11625) | 2493361..2493822 | - | 462 | WP_042462889.1 | hypothetical protein | - |
| OY18_RS12365 (OY18_11630) | 2493812..2494123 | - | 312 | WP_010893232.1 | phage holin family protein | - |
| OY18_RS12370 (OY18_11635) | 2494134..2494628 | - | 495 | WP_088569721.1 | lysozyme | - |
| OY18_RS12375 (OY18_11640) | 2494595..2495212 | - | 618 | WP_088569746.1 | hypothetical protein | - |
| OY18_RS12380 (OY18_11645) | 2495699..2498233 | - | 2535 | WP_060871920.1 | phage/plasmid primase, P4 family | - |
| OY18_RS12385 (OY18_11650) | 2498370..2498969 | - | 600 | WP_060871921.1 | Bro-N domain-containing protein | - |
| OY18_RS12390 | 2498966..2499457 | - | 492 | WP_060871922.1 | hypothetical protein | - |
| OY18_RS14755 | 2499652..2500065 | + | 414 | WP_060871923.1 | hypothetical protein | - |
| OY18_RS12405 (OY18_11670) | 2500245..2500487 | - | 243 | WP_023907032.1 | hypothetical protein | - |
| OY18_RS12410 (OY18_11675) | 2500548..2500763 | - | 216 | WP_229926300.1 | hypothetical protein | - |
| OY18_RS12415 (OY18_11680) | 2500793..2500981 | - | 189 | WP_010894933.1 | hypothetical protein | - |
| OY18_RS14540 (OY18_11685) | 2501035..2501259 | - | 225 | WP_051372715.1 | hypothetical protein | - |
| OY18_RS14545 (OY18_11690) | 2501361..2501666 | + | 306 | WP_023907048.1 | hypothetical protein | - |
| OY18_RS14550 (OY18_11695) | 2501663..2501863 | - | 201 | WP_031338060.1 | Rha family transcriptional regulator | - |
| OY18_RS12425 (OY18_11700) | 2501937..2502707 | + | 771 | WP_010894935.1 | helix-turn-helix transcriptional regulator | - |
| OY18_RS12430 (OY18_11705) | 2502876..2503415 | + | 540 | WP_010894936.1 | hypothetical protein | - |
| OY18_RS12435 (OY18_11710) | 2503452..2503763 | + | 312 | WP_052262873.1 | hypothetical protein | - |
| OY18_RS12440 | 2504125..2504424 | - | 300 | WP_229926301.1 | hypothetical protein | - |
| OY18_RS12445 (OY18_11715) | 2504512..2504901 | + | 390 | WP_010894939.1 | hypothetical protein | - |
| OY18_RS12450 (OY18_11720) | 2504898..2505299 | + | 402 | WP_081089775.1 | hypothetical protein | - |
| OY18_RS12455 (OY18_11725) | 2505299..2505700 | + | 402 | WP_060871764.1 | hypothetical protein | - |
| OY18_RS12460 (OY18_11730) | 2505697..2505888 | + | 192 | WP_060871765.1 | hypothetical protein | - |
| OY18_RS12465 (OY18_11735) | 2505912..2506103 | + | 192 | WP_060871917.1 | hypothetical protein | - |
| OY18_RS12470 (OY18_11740) | 2506135..2506332 | + | 198 | WP_060871918.1 | hypothetical protein | - |
| OY18_RS12475 (OY18_11745) | 2506384..2506812 | + | 429 | WP_060872414.1 | hypothetical protein | - |
| OY18_RS12480 (OY18_11750) | 2506809..2508086 | + | 1278 | WP_060872085.1 | DUF2800 domain-containing protein | - |
| OY18_RS12485 (OY18_11755) | 2508086..2508652 | + | 567 | WP_088569723.1 | DUF2815 family protein | - |
| OY18_RS12490 (OY18_11760) | 2508725..2509873 | + | 1149 | WP_088569724.1 | BRO family protein | - |
| OY18_RS12495 (OY18_11765) | 2509875..2512055 | + | 2181 | WP_088569725.1 | DNA polymerase | - |
| OY18_RS12500 (OY18_11770) | 2512052..2512330 | + | 279 | WP_060871999.1 | VRR-NUC domain-containing protein | - |
| OY18_RS12505 (OY18_11775) | 2512332..2512802 | - | 471 | WP_060871998.1 | DUF1640 domain-containing protein | - |
| OY18_RS12510 (OY18_11780) | 2512887..2514305 | + | 1419 | WP_088569726.1 | DEAD/DEAH box helicase | - |
| OY18_RS14760 | 2514302..2514466 | + | 165 | WP_173406013.1 | hypothetical protein | - |
| OY18_RS12515 | 2514459..2514707 | + | 249 | WP_060871713.1 | DUF4224 domain-containing protein | - |
| OY18_RS12520 (OY18_11785) | 2514707..2515726 | + | 1020 | WP_060871714.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| OY18_RS12525 (OY18_11790) | 2516047..2516325 | + | 279 | WP_010894953.1 | hypothetical protein | - |
| OY18_RS12535 (OY18_11795) | 2517452..2518316 | + | 865 | Protein_2337 | 30S ribosomal protein S6--L-glutamate ligase | - |
| OY18_RS12540 (OY18_11800) | 2519002..2519679 | + | 678 | WP_010894955.1 | response regulator transcription factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|