MGE detailed information
MGE type: Genomic_island MGE length: 16377 bp
Accession: NZ_CP009789 Location: 4505469..4521845 Organism: Escherichia coli K-12 strain K-12 ER3413 Replicon: chromosome
Accession: NZ_CP009789 Location: 4505469..4521845 Organism: Escherichia coli K-12 strain K-12 ER3413 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ER3413_RS22280 () | 4501160..4502473 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| ER3413_RS22285 () | 4502485..4502763 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| ER3413_RS22290 () | 4502760..4503881 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| ER3413_RS25715 () | 4504126..4504242 | - | 117 | Protein_4220 | VOC family protein | - |
| ER3413_RS25070 () | 4504280..4504498 | - | 219 | Protein_4221 | hypothetical protein | - |
| ER3413_RS22295 () | 4504667..4505413 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| ER3413_RS22300 () | 4505469..4506014 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| ER3413_RS22305 () | 4506026..4506283 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| ER3413_RS25530 () | 4506660..4506905 | - | 246 | Protein_4225 | GNAT family N-acetyltransferase | - |
| ER3413_RS22320 () | 4507021..4508261 | + | 1241 | Protein_4226 | helicase YjhR | - |
| ER3413_RS22325 () | 4508844..4509824 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| ER3413_RS22330 () | 4509889..4510995 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| ER3413_RS22335 () | 4511015..4511731 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| ER3413_RS22340 () | 4511787..4512995 | - | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| ER3413_RS22345 () | 4513125..4514333 | - | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| ER3413_RS22350 () | 4514440..4516449 | - | 2010 | Protein_4232 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| ER3413_RS22355 () | 4516703..4517197 | - | 495 | WP_001308243.1 | DUF2501 domain-containing protein | - |
| ER3413_RS22360 () | 4517246..4517983 | - | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| ER3413_RS22365 () | 4517986..4518525 | - | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| ER3413_RS22370 () | 4518632..4519105 | - | 474 | WP_000538191.1 | threonine/serine exporter | - |
| ER3413_RS22375 () | 4519096..4519866 | - | 771 | WP_001338213.1 | threonine/serine exporter ThrE family protein | - |
| ER3413_RS22380 () | 4520485..4521210 | + | 726 | WP_000936635.1 | Transcriptional regulatory protein RcsB | VF |
| ER3413_RS22385 () | 4521168..4521845 | + | 678 | WP_001301727.1 | Transcriptional regulatory protein RcsB | VF |
| ER3413_RS22390 () | 4521883..4522671 | - | 789 | WP_000331618.1 | siderophore-iron reductase FhuF | - |
| ER3413_RS22395 () | 4522812..4523048 | + | 237 | WP_001393508.1 | DUF1435 domain-containing protein | - |
| ER3413_RS22415 () | 4523677..4524708 | - | 1032 | WP_001272330.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| ER3413_RS22420 () | 4524811..4525224 | + | 414 | WP_000204012.1 | DNA polymerase III subunit psi | - |
| ER3413_RS22425 () | 4525193..4525639 | + | 447 | WP_001092461.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| ER3413_RS22430 () | 4525654..4526331 | + | 678 | WP_000870710.1 | pyrimidine 5'-nucleotidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20047 | CP009789 | 4505469..4521845 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22706 | NC_010473 | 4633070..4649322 | 0.002 |