MGE detailed information
MGE type: Prophage MGE length: 65152 bp
Accession: NZ_CP009787 Location: 4111535..4176686 Organism: Yersinia rohdei strain YRA Replicon: chromosome
Accession: NZ_CP009787 Location: 4111535..4176686 Organism: Yersinia rohdei strain YRA Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CH64_RS18035 () | 4106727..4107791 | - | 1065 | WP_032816874.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| CH64_RS18040 () | 4107788..4108312 | - | 525 | WP_004714646.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| CH64_RS18045 () | 4108521..4109243 | - | 723 | WP_004714647.1 | UDP-2,3-diacylglucosamine diphosphatase | - |
| CH64_RS18050 () | 4109254..4109748 | - | 495 | WP_004714648.1 | peptidylprolyl isomerase B | - |
| CH64_RS18055 () | 4109960..4111345 | + | 1386 | WP_032816875.1 | cysteine--tRNA ligase | - |
| CH64_RS18060 () | 4111535..4111747 | - | 213 | WP_004390634.1 | ribosome-associated protein YbcJ | - |
| CH64_RS18065 () | 4111762..4112628 | - | 867 | WP_004714650.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| CH64_RS18075 () | 4113094..4114308 | + | 1215 | WP_004714651.1 | Prophage integrase IntS ; Integrase | Integrase |
| CH64_RS18080 () | 4114468..4114692 | + | 225 | Protein_3543 | Prophage integrase IntS ; Integrase | Integrase |
| CH64_RS18085 () | 4114970..4116115 | - | 1146 | WP_004714652.1 | PD-(D/E)XK nuclease family protein | - |
| CH64_RS18090 () | 4116123..4122083 | - | 5961 | WP_004714653.1 | DEAD/DEAH box helicase | - |
| CH64_RS18095 () | 4122098..4124914 | - | 2817 | WP_032816879.1 | hypothetical protein | - |
| CH64_RS18100 () | 4124995..4127781 | - | 2787 | WP_004714655.1 | hypothetical protein | - |
| CH64_RS18105 () | 4127783..4128871 | - | 1089 | WP_004714656.1 | DNA cytosine methyltransferase | - |
| CH64_RS20340 () | 4129417..4129824 | - | 408 | WP_144404283.1 | hypothetical protein | - |
| CH64_RS18110 () | 4130103..4130318 | - | 216 | WP_032816889.1 | AlpA family transcriptional regulator | - |
| CH64_RS18115 () | 4130441..4131082 | - | 642 | WP_071817884.1 | inovirus Gp2 family protein | - |
| CH64_RS18120 () | 4131752..4132567 | + | 816 | WP_032816881.1 | hypothetical protein | - |
| CH64_RS18125 () | 4132780..4133571 | + | 792 | WP_042542395.1 | 50S ribosome-binding GTPase | - |
| CH64_RS18130 () | 4133821..4134375 | + | 555 | WP_032816892.1 | hypothetical protein | - |
| CH64_RS18135 () | 4134612..4134890 | + | 279 | WP_200891557.1 | hypothetical protein | - |
| CH64_RS18140 () | 4135146..4135967 | + | 822 | WP_032816882.1 | DUF945 domain-containing protein | - |
| CH64_RS18145 () | 4136322..4136753 | + | 432 | WP_004714665.1 | antirestriction protein | - |
| CH64_RS18150 () | 4136845..4137216 | + | 372 | WP_004714666.1 | TA system toxin CbtA family protein | Toxin Detail |
| CH64_RS18155 () | 4137213..4137545 | + | 333 | WP_032816883.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CH64_RS18160 () | 4137631..4138485 | + | 855 | WP_004714667.1 | DUF4942 domain-containing protein | - |
| CH64_RS18165 () | 4138648..4139652 | - | 1005 | WP_042542338.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CH64_RS18170 () | 4139587..4140051 | + | 465 | WP_082044792.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| CH64_RS18175 () | 4140431..4141066 | + | 636 | WP_032818540.1 | DUF1120 domain-containing protein | - |
| CH64_RS18180 () | 4141330..4141527 | + | 198 | WP_032818541.1 | phage holin family protein | - |
| CH64_RS18185 () | 4141558..4141815 | + | 258 | Protein_3565 | lysozyme | - |
| CH64_RS20345 () | 4141884..4142045 | + | 162 | Protein_3566 | baseplate J/gp47 family protein | - |
| CH64_RS18190 () | 4142057..4142476 | + | 420 | WP_004716911.1 | tail fiber assembly protein | - |
| CH64_RS18195 () | 4142559..4142777 | - | 219 | WP_032818544.1 | hypothetical protein | - |
| CH64_RS18200 () | 4142758..4143399 | - | 642 | WP_004716913.1 | hypothetical protein | - |
| CH64_RS18205 () | 4143766..4144715 | - | 950 | Protein_3570 | hypothetical protein | - |
| CH64_RS18210 () | 4145252..4145758 | - | 507 | WP_032818546.1 | hypothetical protein | - |
| CH64_RS18215 () | 4145952..4146203 | - | 252 | WP_032818547.1 | excisionase family protein | - |
| CH64_RS20025 () | 4146686..4147288 | - | 603 | Protein_3573 | tyrosine-type recombinase/integrase | - |
| CH64_RS20505 () | 4147675..4147848 | + | 174 | WP_004716897.1 | hypothetical protein | - |
| CH64_RS18225 () | 4147850..4148308 | + | 459 | WP_032818524.1 | hypothetical protein | - |
| CH64_RS18230 () | 4148554..4150095 | + | 1542 | WP_004716899.1 | DUF2235 domain-containing protein | - |
| CH64_RS18235 () | 4150609..4150914 | + | 306 | WP_032818525.1 | hypothetical protein | - |
| CH64_RS18245 () | 4151409..4151844 | - | 436 | Protein_3578 | IS3 family transposase IS1400 | Transposase |
| CH64_RS18250 () | 4151990..4152526 | - | 537 | WP_032818529.1 | hypothetical protein | - |
| CH64_RS18255 () | 4152610..4153104 | - | 495 | WP_032818531.1 | DUF2569 domain-containing protein | - |
| CH64_RS18265 () | 4153642..4153917 | - | 276 | WP_032818532.1 | hypothetical protein | - |
| CH64_RS18270 () | 4154067..4154363 | - | 297 | WP_050413258.1 | hypothetical protein | - |
| CH64_RS18275 () | 4154360..4162282 | - | 7923 | WP_162484098.1 | 16S rRNA endonuclease CdiA | VF |
| CH64_RS18280 () | 4162452..4164143 | - | 1692 | WP_004716287.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| CH64_RS18285 () | 4164416..4166362 | - | 1947 | WP_004716288.1 | putative autotransporter | VF |
| CH64_RS20510 () | 4167180..4167335 | - | 156 | WP_004716290.1 | hypothetical protein | - |
| CH64_RS18290 () | 4167576..4169348 | + | 1773 | WP_004716291.1 | ATM1-type heavy metal exporter | VF |
| CH64_RS18295 () | 4169365..4169652 | - | 288 | WP_004716292.1 | antibiotic biosynthesis monooxygenase | - |
| CH64_RS18300 () | 4170051..4170245 | + | 195 | WP_004716294.1 | glycogen synthase | - |
| CH64_RS18305 () | 4170353..4170784 | - | 432 | WP_004716295.1 | TOBE domain-containing protein | - |
| CH64_RS18310 () | 4171029..4171673 | + | 645 | WP_004716296.1 | metallophosphoesterase | - |
| CH64_RS18315 () | 4171803..4172768 | - | 966 | WP_004716297.1 | hypothetical protein | - |
| CH64_RS18320 () | 4173139..4173729 | + | 591 | WP_004716298.1 | Transcriptional regulatory protein RcsB | VF |
| CH64_RS18325 () | 4173926..4174405 | - | 480 | WP_032818000.1 | cold shock domain-containing protein | - |
| CH64_RS18330 () | 4174682..4174891 | + | 210 | WP_004716300.1 | transcription antiterminator/RNA stability regulator CspE | - |
| CH64_RS18335 () | 4175175..4175558 | - | 384 | WP_004716301.1 | fluoride efflux transporter CrcB | - |
| CH64_RS18340 () | 4175634..4176686 | - | 1053 | WP_004716302.1 | diguanylate cyclase | - |
| CH64_RS18345 () | 4176890..4177093 | + | 204 | WP_004716303.1 | Sec-independent protein translocase subunit TatA | - |
| CH64_RS18350 () | 4177201..4178166 | - | 966 | WP_004716304.1 | lipoyl synthase | - |
| CH64_RS18355 () | 4178356..4179039 | - | 684 | WP_004716305.1 | lipoyl(octanoyl) transferase LipB | - |
| CH64_RS18360 () | 4179283..4179546 | - | 264 | WP_032818005.1 | DUF493 family protein YbeD | - |
| CH64_RS18365 () | 4179678..4180889 | - | 1212 | WP_032818008.1 | D-alanyl-D-alanine carboxypeptidase DacA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|