MGE detailed information
MGE type: Genomic_island MGE length: 73226 bp
Accession: NZ_CP009769 Location: 3071656..3144881 Organism: Pectobacterium brasiliense strain BC1 Replicon: chromosome
Accession: NZ_CP009769 Location: 3071656..3144881 Organism: Pectobacterium brasiliense strain BC1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NC16_RS13960 () | 3067045..3068262 | - | 1218 | WP_014915907.1 | flagellar hook protein FlgE | - |
| NC16_RS13965 () | 3068337..3069020 | - | 684 | WP_039464781.1 | flagellar hook assembly protein FlgD | - |
| NC16_RS13970 () | 3069036..3069440 | - | 405 | WP_010279553.1 | flagellar basal body rod protein FlgC | - |
| NC16_RS13975 () | 3069469..3069885 | - | 417 | WP_010279550.1 | flagellar basal body rod protein FlgB | - |
| NC16_RS13980 () | 3070051..3070719 | + | 669 | WP_039273432.1 | flagellar basal body P-ring formation protein FlgA | - |
| NC16_RS13985 () | 3070861..3071157 | + | 297 | WP_014915911.1 | anti-sigma-28 factor FlgM | - |
| NC16_RS13990 () | 3071163..3071600 | + | 438 | WP_039285777.1 | flagellar export chaperone FlgN | - |
| NC16_RS13995 () | 3071656..3072075 | - | 420 | WP_039285774.1 | Flagellar protein FlhE | VF |
| NC16_RS14000 () | 3072072..3074156 | - | 2085 | WP_039285772.1 | Flagellar biosynthesis protein FlhA | VF |
| NC16_RS14005 () | 3074149..3075300 | - | 1152 | WP_014915915.1 | Flagellar biosynthetic protein FlhB | VF |
| NC16_RS14010 () | 3075545..3076189 | - | 645 | WP_014915916.1 | Protein phosphatase CheZ | VF |
| NC16_RS14015 () | 3076199..3076588 | - | 390 | WP_010279519.1 | Chemotaxis protein CheY | VF |
| NC16_RS14020 () | 3076627..3077679 | - | 1053 | WP_039273419.1 | Chemotaxis response regulator protein-glutamate methylesterase | VF |
| NC16_RS14025 () | 3077679..3078551 | - | 873 | WP_014915918.1 | Chemotaxis protein methyltransferase | VF |
| NC16_RS14030 () | 3079065..3080750 | - | 1686 | WP_039498636.1 | Methyl-accepting chemotaxis protein I | VF |
| NC16_RS14035 () | 3080886..3081383 | - | 498 | WP_014915920.1 | Chemotaxis protein CheW | VF |
| NC16_RS14040 () | 3081415..3083418 | - | 2004 | WP_174435844.1 | Chemotaxis protein CheA | VF |
| NC16_RS14045 () | 3083458..3084513 | - | 1056 | WP_039285760.1 | Motility protein B | VF |
| NC16_RS14050 () | 3084510..3085397 | - | 888 | WP_014915923.1 | Motility protein A | VF |
| NC16_RS14055 () | 3085532..3086110 | - | 579 | WP_005970730.1 | Flagellar transcriptional regulator FlhC | VF |
| NC16_RS14060 () | 3086114..3086464 | - | 351 | WP_014915924.1 | Flagellar transcriptional regulator FlhD | VF |
| NC16_RS14065 () | 3087283..3088245 | - | 963 | WP_174435845.1 | DMT family transporter | - |
| NC16_RS14070 () | 3088525..3090246 | + | 1722 | WP_014915926.1 | Methyl-accepting chemotaxis protein III | VF |
| NC16_RS14080 () | 3090403..3090606 | - | 204 | WP_014915927.1 | protein DsrB | - |
| NC16_RS14085 () | 3090816..3092231 | + | 1416 | WP_039503560.1 | diguanylate cyclase | - |
| NC16_RS14090 () | 3092507..3092725 | + | 219 | WP_010279476.1 | KTSC domain-containing protein | - |
| NC16_RS14095 () | 3092950..3093306 | + | 357 | WP_039503564.1 | hypothetical protein | - |
| NC16_RS14100 () | 3093361..3094260 | - | 900 | WP_039503565.1 | HTH-type transcriptional regulator DmlR | VF |
| NC16_RS14105 () | 3094372..3095385 | + | 1014 | WP_039503567.1 | CAR family subclass B3 metallo-beta-lactamase | - |
| NC16_RS14110 () | 3095959..3096156 | - | 198 | WP_052325999.1 | hypothetical protein | - |
| NC16_RS14115 () | 3096286..3097119 | - | 834 | WP_039503570.1 | DUF4942 domain-containing protein | - |
| NC16_RS14120 () | 3097238..3097558 | - | 321 | WP_039503572.1 | TA system toxin CbtA family protein | Toxin Detail |
| NC16_RS14125 () | 3097627..3097962 | - | 336 | WP_039503575.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NC16_RS14130 () | 3098002..3098475 | - | 474 | WP_039503577.1 | DNA repair protein RadC | - |
| NC16_RS14135 () | 3098682..3099287 | - | 606 | WP_039503579.1 | hypothetical protein | - |
| NC16_RS14140 () | 3099316..3099870 | - | 555 | WP_039503580.1 | hypothetical protein | - |
| NC16_RS14145 () | 3100169..3101044 | - | 876 | WP_080752722.1 | 50S ribosome-binding GTPase | - |
| NC16_RS14150 () | 3101118..3101975 | - | 858 | WP_039503583.1 | hypothetical protein | - |
| NC16_RS14155 () | 3102747..3103346 | + | 600 | WP_039503585.1 | inovirus Gp2 family protein | - |
| NC16_RS14160 () | 3103529..3103732 | + | 204 | WP_039503587.1 | AlpA family transcriptional regulator | - |
| NC16_RS14165 () | 3104321..3104839 | + | 519 | WP_039503589.1 | Major exported protein | VF |
| NC16_RS14170 () | 3104960..3106789 | + | 1830 | WP_039503591.1 | Actin cross-linking toxin VgrG1 | VF |
| NC16_RS14175 () | 3106818..3107261 | + | 444 | WP_039503592.1 | DUF1795 domain-containing protein | - |
| NC16_RS14180 () | 3107254..3111528 | + | 4275 | WP_039503594.1 | PAAR domain-containing protein | - |
| NC16_RS14185 () | 3111544..3111981 | + | 438 | WP_039503597.1 | hypothetical protein | - |
| NC16_RS14190 () | 3112393..3112944 | + | 552 | WP_039503600.1 | hypothetical protein | - |
| NC16_RS14195 () | 3113666..3115120 | + | 1455 | WP_039503602.1 | Flagellin | VF |
| NC16_RS14200 () | 3115172..3115717 | + | 546 | WP_039503604.1 | transcriptional regulator | - |
| NC16_RS14205 () | 3115806..3116681 | + | 876 | WP_039503795.1 | HNH endonuclease | - |
| NC16_RS14210 () | 3116861..3120148 | + | 3288 | WP_039503606.1 | ATP-binding protein | - |
| NC16_RS14215 () | 3120201..3121109 | + | 909 | WP_039503608.1 | hypothetical protein | - |
| NC16_RS14220 () | 3121393..3125175 | + | 3783 | WP_075278213.1 | hypothetical protein | - |
| NC16_RS14225 () | 3125180..3129607 | + | 4428 | WP_039503612.1 | ATP-binding protein | - |
| NC16_RS14230 () | 3129604..3131049 | + | 1446 | WP_039503614.1 | hypothetical protein | - |
| NC16_RS22705 () | 3131617..3132393 | + | 777 | WP_072036110.1 | hypothetical protein | - |
| NC16_RS14245 () | 3132681..3133940 | - | 1260 | WP_039503616.1 | Prophage integrase IntA ; Integrase | Integrase |
| NC16_RS14265 () | 3134578..3135126 | - | 549 | WP_039503618.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| NC16_RS14270 () | 3135185..3137017 | - | 1833 | WP_010279371.1 | excinuclease ABC subunit UvrC | - |
| NC16_RS14275 () | 3137010..3137666 | - | 657 | WP_010279369.1 | Response regulator UvrY | VF |
| NC16_RS14280 () | 3138310..3138534 | + | 225 | WP_014915936.1 | DUF2594 family protein | - |
| NC16_RS14285 () | 3138627..3138914 | - | 288 | WP_014915937.1 | hypothetical protein | - |
| NC16_RS14295 () | 3139793..3141205 | + | 1413 | WP_039503620.1 | D-serine/D-alanine/glycine transporter | - |
| NC16_RS14300 () | 3141377..3141643 | - | 267 | WP_075278214.1 | anti-adapter protein IraP | - |
| NC16_RS14305 () | 3142036..3142305 | - | 270 | Protein_2747 | HTH-type transcriptional regulator CatM | VF |
| NC16_RS14315 () | 3143272..3144381 | - | 1110 | WP_075278215.1 | hypothetical protein | - |
| NC16_RS14320 () | 3144378..3144881 | - | 504 | WP_039509360.1 | GNAT family N-acetyltransferase | - |
| NC16_RS14325 () | 3145600..3146772 | + | 1173 | WP_075278216.1 | prolyl oligopeptidase family serine peptidase | - |
| NC16_RS14330 () | 3146843..3148060 | - | 1218 | WP_104210387.1 | multidrug effflux MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|