MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 158521 bp
Accession: NZ_CP009567 Location: 1..158521 Organism: Salmonella enterica subsp. enterica serovar Newport str. CVM 22462 Replicon: plasmid pCFSAN000934_02
Accession: NZ_CP009567 Location: 1..158521 Organism: Salmonella enterica subsp. enterica serovar Newport str. CVM 22462 Replicon: plasmid pCFSAN000934_02
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEEN462_RS00545 () | 2440..2757 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| SEEN462_RS00550 () | 2754..3287 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| SEEN462_RS00555 () | 3381..4526 | - | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| SEEN462_RS00560 () | 4850..6112 | - | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| SEEN462_RS00565 () | 6299..6607 | + | 309 | Protein_5 | IS1380 family transposase | - |
| SEEN462_RS00570 () | 6931..8076 | + | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| SEEN462_RS00575 () | 8170..8703 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| SEEN462_RS00580 () | 8700..9017 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| SEEN462_RS00585 () | 9745..15231 | + | 5487 | WP_000606835.1 | DUF4165 domain-containing protein | - |
| SEEN462_RS00590 () | 15380..16087 | + | 708 | WP_001259346.1 | DsbC family protein | - |
| SEEN462_RS00595 () | 16084..16785 | + | 702 | Protein_11 | conjugal transfer protein TraC | - |
| SEEN462_RS00600 () | 16785..17744 | - | 960 | Protein_12 | IS1380-like element ISEc9 family transposase | - |
| SEEN462_RS00605 () | 18029..18421 | - | 393 | WP_000479535.1 | hypothetical protein | - |
| SEEN462_RS00610 () | 18425..19003 | - | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| SEEN462_RS00615 () | 19000..20313 | - | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| SEEN462_RS00620 () | 20313..21230 | - | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| SEEN462_RS00625 () | 21214..21840 | - | 627 | WP_001049717.1 | hypothetical protein | - |
| SEEN462_RS00630 () | 21837..22118 | - | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| SEEN462_RS00635 () | 22263..22640 | - | 378 | WP_001326174.1 | hypothetical protein | - |
| SEEN462_RS00640 () | 22964..23626 | - | 663 | WP_001231464.1 | hypothetical protein | - |
| SEEN462_RS00645 () | 23626..24003 | - | 378 | WP_000869297.1 | hypothetical protein | - |
| SEEN462_RS00650 () | 24013..24459 | - | 447 | WP_000122507.1 | hypothetical protein | - |
| SEEN462_RS00655 () | 24469..25098 | - | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| SEEN462_RS00660 () | 25055..25639 | - | 585 | WP_000332868.1 | hypothetical protein | - |
| SEEN462_RS00665 () | 25650..27515 | - | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| SEEN462_RS25225 () | 27512..30484 | - | 2973 | WP_001326173.1 | TraI domain-containing protein | - |
| SEEN462_RS00675 () | 30652..31269 | + | 618 | WP_001249395.1 | hypothetical protein | - |
| SEEN462_RS00680 () | 31251..31484 | + | 234 | WP_001191890.1 | hypothetical protein | - |
| SEEN462_RS00685 () | 31484..33676 | + | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| SEEN462_RS00690 () | 33691..34179 | + | 489 | WP_000467110.1 | hypothetical protein | - |
| SEEN462_RS00695 () | 34270..34569 | - | 300 | WP_001326171.1 | hypothetical protein | - |
| SEEN462_RS00705 () | 34781..35398 | - | 618 | WP_000464630.1 | hypothetical protein | - |
| SEEN462_RS00710 () | 35454..36110 | - | 657 | WP_000268552.1 | hypothetical protein | - |
| SEEN462_RS00715 () | 36110..37537 | - | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| SEEN462_RS00720 () | 37541..38041 | - | 501 | WP_000647188.1 | hypothetical protein | - |
| SEEN462_RS00725 () | 38050..38361 | - | 312 | WP_001447539.1 | hypothetical protein | - |
| SEEN462_RS00730 () | 38367..38798 | - | 432 | WP_001326170.1 | hypothetical protein | - |
| SEEN462_RS00735 () | 38866..39540 | - | 675 | WP_000344149.1 | hypothetical protein | - |
| SEEN462_RS28045 () | 39515..39796 | - | 282 | WP_000044823.1 | hypothetical protein | - |
| SEEN462_RS00745 () | 39789..40166 | - | 378 | WP_001125904.1 | hypothetical protein | - |
| SEEN462_RS27880 () | 40493..40636 | + | 144 | WP_000939033.1 | hypothetical protein | - |
| SEEN462_RS00750 () | 40728..41363 | + | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| SEEN462_RS00755 () | 41416..41688 | - | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| SEEN462_RS00760 () | 41737..42918 | - | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| SEEN462_RS00765 () | 42922..43707 | - | 786 | WP_001151304.1 | ParA family protein | - |
| SEEN462_RS00770 () | 43881..44192 | - | 312 | WP_000338945.1 | hypothetical protein | - |
| SEEN462_RS00775 () | 44499..45314 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| SEEN462_RS00780 () | 45375..46178 | + | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| SEEN462_RS00785 () | 46178..47014 | + | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| SEEN462_RS00790 () | 47320..47562 | + | 243 | WP_000844627.1 | transposase | - |
| SEEN462_RS00795 () | 47594..48244 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| SEEN462_RS00800 () | 48350..49549 | + | 1200 | WP_000804063.1 | tetracycline efflux MFS transporter Tet(A) | - |
| SEEN462_RS27525 () | 49516..49704 | - | 189 | Protein_53 | IS91 family transposase | - |
| SEEN462_RS00805 () | 49816..50121 | - | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| SEEN462_RS00810 () | 50149..51363 | - | 1215 | WP_000214123.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| SEEN462_RS28050 () | 51580..52026 | - | 447 | Protein_56 | DUF3363 domain-containing protein | - |
| SEEN462_RS00820 () | 52495..53988 | - | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| SEEN462_RS00825 () | 54199..54423 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| SEEN462_RS00830 () | 54420..55157 | - | 738 | WP_001366550.1 | recombinase family protein | - |
| SEEN462_RS27885 () | 55643..55783 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| SEEN462_RS00840 () | 55789..56493 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SEEN462_RS00845 () | 56800..56979 | + | 180 | Protein_62 | helix-turn-helix transcriptional regulator | - |
| SEEN462_RS00850 () | 57044..57748 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SEEN462_RS00855 () | 57963..58460 | - | 498 | WP_000062185.1 | hypothetical protein | - |
| SEEN462_RS00860 () | 58463..58951 | - | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| SEEN462_RS00865 () | 59048..59383 | + | 336 | WP_000683476.1 | hypothetical protein | - |
| SEEN462_RS00870 () | 59398..59868 | - | 471 | WP_001281821.1 | hypothetical protein | - |
| SEEN462_RS27050 () | 59861..60232 | - | 372 | WP_000516916.1 | hypothetical protein | - |
| SEEN462_RS27055 () | 60243..60437 | - | 195 | WP_000343597.1 | hypothetical protein | - |
| SEEN462_RS00890 () | 60778..61326 | - | 549 | WP_001061574.1 | transcriptional regulator | - |
| SEEN462_RS00895 () | 61489..61839 | + | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SEEN462_RS00900 () | 61844..62146 | + | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| SEEN462_RS00905 () | 62173..62466 | - | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| SEEN462_RS00910 () | 62554..62826 | - | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| SEEN462_RS00915 () | 62884..63411 | - | 528 | WP_001236377.1 | thermonuclease family protein | - |
| SEEN462_RS00925 () | 63642..64499 | - | 858 | WP_001167032.1 | hypothetical protein | - |
| SEEN462_RS00930 () | 64486..64716 | - | 231 | WP_000972663.1 | hypothetical protein | - |
| SEEN462_RS00935 () | 64716..65234 | - | 519 | WP_000210756.1 | nitrite reductase | - |
| SEEN462_RS00940 () | 65231..65677 | - | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| SEEN462_RS00945 () | 65677..66036 | - | 360 | WP_000422768.1 | hypothetical protein | - |
| SEEN462_RS00950 () | 66093..66521 | - | 429 | WP_000591074.1 | hypothetical protein | - |
| SEEN462_RS00955 () | 66555..67415 | - | 861 | WP_000139698.1 | DsbA family protein | - |
| SEEN462_RS00960 () | 67431..68390 | - | 960 | WP_000829616.1 | S49 family peptidase | - |
| SEEN462_RS00965 () | 68390..69244 | - | 855 | WP_000539392.1 | hypothetical protein | - |
| SEEN462_RS00970 () | 69249..69542 | - | 294 | WP_001370730.1 | hypothetical protein | - |
| SEEN462_RS00975 () | 69553..70026 | - | 474 | WP_000057877.1 | hypothetical protein | - |
| SEEN462_RS00980 () | 70123..70644 | - | 522 | WP_000805800.1 | hypothetical protein | - |
| SEEN462_RS00985 () | 70647..71168 | - | 522 | WP_000393785.1 | hypothetical protein | - |
| SEEN462_RS00990 () | 71173..71781 | - | 609 | WP_000849071.1 | hypothetical protein | - |
| SEEN462_RS00995 () | 72050..73165 | + | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| SEEN462_RS01000 () | 73183..73617 | + | 435 | WP_000883925.1 | hypothetical protein | - |
| SEEN462_RS01010 () | 74654..75754 | - | 1101 | WP_000350011.1 | plasmid replication protein | - |
| SEEN462_RS01015 () | 75739..76026 | - | 288 | WP_000127321.1 | hypothetical protein | - |
| SEEN462_RS01020 () | 76031..76570 | - | 540 | WP_001447712.1 | hypothetical protein | - |
| SEEN462_RS01025 () | 77069..78052 | + | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| SEEN462_RS01030 () | 78069..78362 | + | 294 | WP_000919078.1 | hypothetical protein | - |
| SEEN462_RS01035 () | 78364..78783 | + | 420 | WP_000651490.1 | H-NS histone family protein | - |
| SEEN462_RS01040 () | 78843..79393 | - | 551 | Protein_98 | regulator | - |
| SEEN462_RS01045 () | 79390..79998 | - | 609 | WP_000891157.1 | hypothetical protein | - |
| SEEN462_RS01050 () | 80009..80542 | - | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| SEEN462_RS01055 () | 80542..80814 | - | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| SEEN462_RS01060 () | 81530..81892 | + | 363 | WP_000683483.1 | hypothetical protein | - |
| SEEN462_RS01065 () | 81930..85544 | - | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| SEEN462_RS01070 () | 85557..86990 | - | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| SEEN462_RS01075 () | 86992..88032 | - | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| SEEN462_RS01080 () | 88143..89654 | - | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| SEEN462_RS01090 () | 89941..90981 | - | 1041 | WP_000101568.1 | DNA-binding protein | - |
| SEEN462_RS01095 () | 91143..92018 | - | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| SEEN462_RS01100 () | 92345..92836 | - | 492 | WP_000139717.1 | hypothetical protein | - |
| SEEN462_RS01105 () | 92833..93702 | - | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| SEEN462_RS01110 () | 93707..94717 | - | 1011 | WP_000543934.1 | tyrosine-type recombinase/integrase | - |
| SEEN462_RS01115 () | 94720..95256 | - | 537 | WP_000949433.1 | hypothetical protein | - |
| SEEN462_RS01125 () | 95555..95836 | - | 282 | WP_000575657.1 | hypothetical protein | - |
| SEEN462_RS01130 () | 96106..96708 | + | 603 | WP_000278322.1 | hypothetical protein | - |
| SEEN462_RS27990 () | 96724..97176 | - | 453 | Protein_115 | hypothetical protein | - |
| SEEN462_RS01140 () | 97347..97787 | - | 441 | WP_001326394.1 | hypothetical protein | - |
| SEEN462_RS01145 () | 97759..102012 | - | 4254 | WP_001257735.1 | RHS domain-containing protein | - |
| SEEN462_RS01150 () | 102145..102870 | - | 726 | WP_000988731.1 | hypothetical protein | - |
| SEEN462_RS01155 () | 102984..103358 | - | 375 | WP_000868820.1 | hypothetical protein | - |
| SEEN462_RS28000 () | 103479..103595 | - | 117 | WP_000338626.1 | hypothetical protein | - |
| SEEN462_RS28005 () | 103605..103724 | - | 120 | Protein_121 | permease | - |
| SEEN462_RS01160 () | 104001..105005 | - | 1005 | WP_000427623.1 | IS110-like element IS4321 family transposase | - |
| SEEN462_RS01165 () | 105105..105539 | - | 435 | WP_000414383.1 | mercury resistance transcriptional regulator MerR | - |
| SEEN462_RS01170 () | 105611..105961 | + | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| SEEN462_RS01175 () | 105977..106252 | + | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| SEEN462_RS01180 () | 106324..108009 | + | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| SEEN462_RS01185 () | 108024..108662 | + | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| SEEN462_RS01190 () | 108774..109139 | + | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| SEEN462_RS01195 () | 109136..109372 | + | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| SEEN462_RS01200 () | 109369..110358 | + | 990 | WP_001276635.1 | DUF3330 domain-containing protein | - |
| SEEN462_RS01205 () | 110568..111272 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| SEEN462_RS01210 () | 111335..112039 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SEEN462_RS01215 () | 112095..113999 | + | 1905 | Protein_133 | Tn3 family transposase | - |
| SEEN462_RS01220 () | 114078..115082 | + | 1005 | WP_000427619.1 | IS110-like element IS5075 family transposase | - |
| SEEN462_RS01225 () | 115264..115485 | - | 222 | WP_000714163.1 | hypothetical protein | - |
| SEEN462_RS01230 () | 115558..115836 | - | 279 | WP_000268337.1 | hypothetical protein | - |
| SEEN462_RS01235 () | 115823..117550 | - | 1728 | WP_000122922.1 | toprim domain-containing protein | - |
| SEEN462_RS01240 () | 117728..118114 | - | 387 | WP_001077336.1 | hypothetical protein | - |
| SEEN462_RS01245 () | 118573..119424 | - | 852 | WP_000595210.1 | hypothetical protein | - |
| SEEN462_RS01250 () | 119499..120056 | - | 558 | WP_000064432.1 | hypothetical protein | - |
| SEEN462_RS01255 () | 120130..120348 | - | 219 | WP_000260293.1 | hypothetical protein | - |
| SEEN462_RS01260 () | 120362..120631 | - | 270 | WP_000184110.1 | hypothetical protein | - |
| SEEN462_RS01265 () | 120624..121229 | - | 606 | WP_000071870.1 | 5'-deoxynucleotidase | - |
| SEEN462_RS01270 () | 121301..121504 | - | 204 | WP_000050847.1 | hypothetical protein | - |
| SEEN462_RS01275 () | 121706..124159 | - | 2454 | WP_001187969.1 | phosphoadenosine phosphosulfate reductase | - |
| SEEN462_RS01280 () | 124247..124633 | - | 387 | WP_000042274.1 | hypothetical protein | - |
| SEEN462_RS01285 () | 124866..125420 | - | 555 | WP_001093867.1 | hypothetical protein | - |
| SEEN462_RS01290 () | 125494..125925 | - | 432 | WP_000687894.1 | hypothetical protein | - |
| SEEN462_RS01295 () | 125986..127611 | - | 1626 | WP_000201432.1 | DNA cytosine methyltransferase | - |
| SEEN462_RS01300 () | 127689..127991 | - | 303 | WP_000410925.1 | hypothetical protein | - |
| SEEN462_RS01305 () | 128069..128413 | - | 345 | WP_000209093.1 | hypothetical protein | - |
| SEEN462_RS01310 () | 128605..128982 | - | 378 | WP_001337696.1 | hypothetical protein | - |
| SEEN462_RS01315 () | 129027..129218 | - | 192 | WP_000651508.1 | hypothetical protein | - |
| SEEN462_RS27075 () | 129556..130008 | - | 453 | WP_001176699.1 | hypothetical protein | - |
| SEEN462_RS01330 () | 129998..130387 | - | 390 | WP_000026577.1 | hypothetical protein | - |
| SEEN462_RS01335 () | 130449..130673 | - | 225 | WP_001102700.1 | 2Fe-2S ferredoxin-like protein | - |
| SEEN462_RS01340 () | 130739..131623 | - | 885 | WP_000477209.1 | hypothetical protein | - |
| SEEN462_RS01345 () | 131697..132197 | - | 501 | WP_000793769.1 | hypothetical protein | - |
| SEEN462_RS01350 () | 132288..132827 | - | 540 | WP_000018872.1 | hypothetical protein | - |
| SEEN462_RS25515 () | 133092..133427 | - | 336 | WP_001447572.1 | hypothetical protein | - |
| SEEN462_RS01355 () | 133489..135285 | - | 1797 | WP_000039319.1 | VWA domain-containing protein | - |
| SEEN462_RS01360 () | 135370..136647 | - | 1278 | WP_000170087.1 | DUF3150 domain-containing protein | - |
| SEEN462_RS01365 () | 136847..137857 | - | 1011 | WP_000706865.1 | YqaJ viral recombinase family protein | - |
| SEEN462_RS01370 () | 137920..138909 | - | 990 | WP_001282585.1 | phage recombination protein Bet | - |
| SEEN462_RS01375 () | 139004..139534 | - | 531 | WP_000987165.1 | single-stranded DNA-binding protein | - |
| SEEN462_RS01380 () | 139595..140503 | - | 909 | WP_000739139.1 | hypothetical protein | - |
| SEEN462_RS01385 () | 140514..141482 | - | 969 | WP_000085160.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| SEEN462_RS01390 () | 141702..141887 | - | 186 | WP_001186917.1 | hypothetical protein | - |
| SEEN462_RS01395 () | 142191..142511 | - | 321 | WP_000547566.1 | hypothetical protein | - |
| SEEN462_RS01400 () | 142806..143447 | + | 642 | WP_000796664.1 | hypothetical protein | - |
| SEEN462_RS01405 () | 143570..144430 | + | 861 | WP_000709517.1 | hypothetical protein | - |
| SEEN462_RS01410 () | 144469..147276 | - | 2808 | WP_001447718.1 | conjugal transfer mating pair stabilization protein TraN | - |
| SEEN462_RS01415 () | 147380..148387 | - | 1008 | WP_000983282.1 | TraU family protein | - |
| SEEN462_RS01420 () | 148384..149055 | - | 672 | WP_000575345.1 | EAL domain-containing protein | - |
| SEEN462_RS01425 () | 149052..150317 | - | 1266 | WP_001447719.1 | conjugal transfer protein TraW | - |
| SEEN462_RS01430 () | 150280..150810 | - | 531 | WP_001010740.1 | S26 family signal peptidase | - |
| SEEN462_RS01435 () | 150807..151124 | - | 318 | WP_000351984.1 | hypothetical protein | - |
| SEEN462_RS01440 () | 151139..153586 | - | 2448 | WP_000637384.1 | type IV secretion system protein TraC | - |
| SEEN462_RS01445 () | 153583..154290 | - | 708 | WP_001259346.1 | DsbC family protein | - |
| SEEN462_RS01450 () | 154439..158508 | - | 4070 | Protein_180 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|