MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 80098 bp
Accession: NZ_CP009563 Location: 1..80098 Organism: Salmonella enterica subsp. enterica serovar Newport str. CVM 21538 Replicon: plasmid pCVM21538
Accession: NZ_CP009563 Location: 1..80098 Organism: Salmonella enterica subsp. enterica serovar Newport str. CVM 21538 Replicon: plasmid pCVM21538
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEEN538_RS25355 () | 633..773 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| SEEN538_RS00015 () | 1259..1996 | + | 738 | WP_001366550.1 | recombinase family protein | - |
| SEEN538_RS00020 () | 1993..2217 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| SEEN538_RS00025 () | 2428..3921 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| SEEN538_RS25560 () | 4390..4836 | + | 447 | Protein_5 | DUF3363 domain-containing protein | - |
| SEEN538_RS00035 () | 5053..6267 | + | 1215 | WP_000214123.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| SEEN538_RS00040 () | 6295..6600 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| SEEN538_RS00045 () | 6712..6900 | + | 189 | Protein_8 | IS91 family transposase | - |
| SEEN538_RS00050 () | 6867..8066 | - | 1200 | WP_000804063.1 | tetracycline efflux MFS transporter Tet(A) | - |
| SEEN538_RS00055 () | 8172..8822 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| SEEN538_RS00060 () | 8854..9096 | - | 243 | WP_000844627.1 | transposase | - |
| SEEN538_RS00070 () | 9402..10238 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| SEEN538_RS00075 () | 10238..11041 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| SEEN538_RS00080 () | 11102..11917 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| SEEN538_RS00090 () | 12224..12535 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| SEEN538_RS00095 () | 12709..13494 | + | 786 | WP_001151304.1 | ParA family protein | - |
| SEEN538_RS00100 () | 13498..14679 | + | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| SEEN538_RS00105 () | 14728..15000 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| SEEN538_RS00110 () | 15053..15688 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| SEEN538_RS25360 () | 15780..15923 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| SEEN538_RS00115 () | 16250..16627 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| SEEN538_RS25495 () | 16620..16901 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| SEEN538_RS00125 () | 16876..17550 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| SEEN538_RS00130 () | 17618..18049 | + | 432 | WP_001326170.1 | hypothetical protein | - |
| SEEN538_RS00135 () | 18055..18366 | + | 312 | WP_001447539.1 | hypothetical protein | - |
| SEEN538_RS00140 () | 18375..18875 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| SEEN538_RS00145 () | 18879..20306 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| SEEN538_RS00150 () | 20306..20962 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| SEEN538_RS00155 () | 21018..21635 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| SEEN538_RS00165 () | 21847..22146 | + | 300 | WP_001326171.1 | hypothetical protein | - |
| SEEN538_RS00170 () | 22237..22725 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| SEEN538_RS00175 () | 22740..24431 | - | 1692 | Protein_32 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| SEEN538_RS00180 () | 24484..25188 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SEEN538_RS00185 () | 25251..25955 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| SEEN538_RS00190 () | 26165..27154 | - | 990 | WP_001276635.1 | DUF3330 domain-containing protein | - |
| SEEN538_RS00195 () | 27151..27387 | - | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| SEEN538_RS00200 () | 27384..27749 | - | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| SEEN538_RS00205 () | 27861..28499 | - | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| SEEN538_RS00210 () | 28514..30199 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| SEEN538_RS00215 () | 30271..30546 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| SEEN538_RS00220 () | 30562..30912 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| SEEN538_RS00225 () | 30984..31418 | + | 435 | WP_000414383.1 | mercury resistance transcriptional regulator MerR | - |
| SEEN538_RS00230 () | 31518..32522 | + | 1005 | WP_000427623.1 | IS110-like element IS4321 family transposase | - |
| SEEN538_RS25435 () | 32799..32918 | + | 120 | Protein_44 | permease | - |
| SEEN538_RS25440 () | 32928..33044 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| SEEN538_RS00240 () | 33165..33539 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| SEEN538_RS00245 () | 33653..34378 | + | 726 | WP_000988731.1 | hypothetical protein | - |
| SEEN538_RS00255 () | 34511..38764 | + | 4254 | WP_001257735.1 | RHS domain-containing protein | - |
| SEEN538_RS00260 () | 38736..39176 | + | 441 | WP_001326394.1 | hypothetical protein | - |
| SEEN538_RS25450 () | 39347..39799 | + | 453 | Protein_50 | hypothetical protein | - |
| SEEN538_RS00270 () | 39815..40417 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| SEEN538_RS00275 () | 40687..40968 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| SEEN538_RS00285 () | 41267..41803 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| SEEN538_RS00290 () | 41806..42816 | + | 1011 | WP_000543934.1 | tyrosine-type recombinase/integrase | - |
| SEEN538_RS00295 () | 42821..43690 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| SEEN538_RS00300 () | 43687..44178 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| SEEN538_RS00305 () | 44505..45380 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| SEEN538_RS00310 () | 45533..46573 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| SEEN538_RS00320 () | 46860..48371 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| SEEN538_RS00325 () | 48482..49522 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| SEEN538_RS00330 () | 49524..50957 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| SEEN538_RS00335 () | 50970..54584 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| SEEN538_RS00340 () | 54622..54984 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| SEEN538_RS00345 () | 55700..55972 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| SEEN538_RS00350 () | 55972..56505 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| SEEN538_RS00355 () | 56516..57124 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| SEEN538_RS00360 () | 57121..57671 | + | 551 | Protein_67 | regulator | - |
| SEEN538_RS00365 () | 57731..58150 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| SEEN538_RS00370 () | 58152..58445 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| SEEN538_RS00375 () | 58462..59445 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| SEEN538_RS00380 () | 59944..60483 | + | 540 | WP_001447712.1 | hypothetical protein | - |
| SEEN538_RS00385 () | 60488..60775 | + | 288 | WP_000127321.1 | hypothetical protein | - |
| SEEN538_RS00390 () | 60760..61860 | + | 1101 | WP_000350011.1 | plasmid replication protein | - |
| SEEN538_RS00405 () | 62897..63331 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| SEEN538_RS00410 () | 63349..64464 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| SEEN538_RS00415 () | 64733..65341 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| SEEN538_RS00420 () | 65346..65867 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| SEEN538_RS00425 () | 65870..66391 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| SEEN538_RS00430 () | 66488..66961 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| SEEN538_RS00435 () | 66972..67265 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| SEEN538_RS00440 () | 67270..68124 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| SEEN538_RS00445 () | 68124..69083 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| SEEN538_RS00450 () | 69099..69959 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| SEEN538_RS00455 () | 69993..70421 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| SEEN538_RS00460 () | 70478..70837 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| SEEN538_RS00465 () | 70837..71283 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| SEEN538_RS00470 () | 71280..71798 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| SEEN538_RS00475 () | 71798..72028 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| SEEN538_RS00480 () | 72015..72872 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| SEEN538_RS00490 () | 73103..73630 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| SEEN538_RS00495 () | 73688..73960 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| SEEN538_RS00500 () | 74048..74341 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| SEEN538_RS00505 () | 74368..74670 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| SEEN538_RS00510 () | 74675..75025 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SEEN538_RS00515 () | 75188..75736 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| SEEN538_RS00525 () | 76077..76271 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| SEEN538_RS00530 () | 76282..76653 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| SEEN538_RS00535 () | 76646..77116 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| SEEN538_RS00540 () | 77131..77466 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| SEEN538_RS00545 () | 77563..78051 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| SEEN538_RS00550 () | 78054..78551 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| SEEN538_RS00555 () | 78766..79470 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SEEN538_RS00560 () | 79535..79714 | - | 180 | Protein_103 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|