MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 120346 bp
Accession: NZ_CP009562 Location: 1..120346 Organism: Salmonella enterica subsp. enterica serovar Newport str. CVM 22513 Replicon: plasmid pCVM22513
Accession: NZ_CP009562 Location: 1..120346 Organism: Salmonella enterica subsp. enterica serovar Newport str. CVM 22513 Replicon: plasmid pCVM22513
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEEN513_RS00015 () | 4899..5216 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| SEEN513_RS00020 () | 5213..5746 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| SEEN513_RS00025 () | 5840..6985 | - | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| SEEN513_RS00030 () | 7309..8571 | - | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| SEEN513_RS00035 () | 8758..9066 | + | 309 | Protein_5 | IS1380 family transposase | - |
| SEEN513_RS00040 () | 9390..10535 | + | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| SEEN513_RS00045 () | 10629..11162 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| SEEN513_RS00050 () | 11159..11476 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| SEEN513_RS00060 () | 12204..17690 | + | 5487 | WP_000606835.1 | DUF4165 domain-containing protein | - |
| SEEN513_RS00065 () | 17839..18546 | + | 708 | WP_001259346.1 | DsbC family protein | - |
| SEEN513_RS00070 () | 18543..20990 | + | 2448 | WP_000637384.1 | type IV secretion system protein TraC | - |
| SEEN513_RS00075 () | 21005..21322 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| SEEN513_RS00080 () | 21319..21849 | + | 531 | WP_001010740.1 | S26 family signal peptidase | - |
| SEEN513_RS00085 () | 21812..22171 | + | 360 | Protein_14 | conjugal transfer protein TraW | - |
| SEEN513_RS00090 () | 22225..22929 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SEEN513_RS00095 () | 22992..23696 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| SEEN513_RS00100 () | 23906..24895 | - | 990 | WP_001276635.1 | DUF3330 domain-containing protein | - |
| SEEN513_RS00105 () | 24892..25128 | - | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| SEEN513_RS00110 () | 25125..25490 | - | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| SEEN513_RS00115 () | 25602..26240 | - | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| SEEN513_RS00120 () | 26255..27940 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| SEEN513_RS00125 () | 28012..28287 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| SEEN513_RS00130 () | 28303..28653 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| SEEN513_RS00135 () | 28725..29159 | + | 435 | WP_000414383.1 | mercury resistance transcriptional regulator MerR | - |
| SEEN513_RS00140 () | 29259..30263 | + | 1005 | WP_000427623.1 | IS110-like element IS4321 family transposase | - |
| SEEN513_RS25840 () | 30540..30659 | + | 120 | Protein_26 | permease | - |
| SEEN513_RS25845 () | 30669..30785 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| SEEN513_RS00150 () | 30906..31280 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| SEEN513_RS00155 () | 31394..32119 | + | 726 | WP_000988731.1 | hypothetical protein | - |
| SEEN513_RS00165 () | 32252..36505 | + | 4254 | WP_001257735.1 | RHS domain-containing protein | - |
| SEEN513_RS00170 () | 36477..36917 | + | 441 | WP_001326394.1 | hypothetical protein | - |
| SEEN513_RS25855 () | 37088..37540 | + | 453 | Protein_32 | hypothetical protein | - |
| SEEN513_RS00180 () | 37556..38158 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| SEEN513_RS00185 () | 38428..38709 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| SEEN513_RS00195 () | 39008..39544 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| SEEN513_RS00200 () | 39547..40557 | + | 1011 | WP_000543934.1 | tyrosine-type recombinase/integrase | - |
| SEEN513_RS00205 () | 40562..41431 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| SEEN513_RS00210 () | 41428..41919 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| SEEN513_RS00215 () | 42246..43121 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| SEEN513_RS00220 () | 43283..44323 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| SEEN513_RS00230 () | 44610..46121 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| SEEN513_RS00235 () | 46232..47272 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| SEEN513_RS00240 () | 47274..48707 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| SEEN513_RS00245 () | 48720..52334 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| SEEN513_RS00250 () | 52372..52734 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| SEEN513_RS00255 () | 53450..53722 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| SEEN513_RS00260 () | 53722..54255 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| SEEN513_RS00265 () | 54266..54874 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| SEEN513_RS00270 () | 54871..55421 | + | 551 | Protein_49 | regulator | - |
| SEEN513_RS00275 () | 55481..55900 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| SEEN513_RS00280 () | 55902..56195 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| SEEN513_RS00285 () | 56212..57195 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| SEEN513_RS00290 () | 57694..58233 | + | 540 | WP_001447712.1 | hypothetical protein | - |
| SEEN513_RS00295 () | 58238..58525 | + | 288 | WP_000127321.1 | hypothetical protein | - |
| SEEN513_RS00300 () | 58510..59610 | + | 1101 | WP_000350011.1 | plasmid replication protein | - |
| SEEN513_RS00315 () | 60647..61081 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| SEEN513_RS00320 () | 61099..62214 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| SEEN513_RS00325 () | 62483..63091 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| SEEN513_RS00330 () | 63096..63617 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| SEEN513_RS00335 () | 63620..64141 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| SEEN513_RS00340 () | 64238..64711 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| SEEN513_RS00345 () | 64722..65015 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| SEEN513_RS00350 () | 65020..65874 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| SEEN513_RS00355 () | 65874..66833 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| SEEN513_RS00360 () | 66849..67709 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| SEEN513_RS00365 () | 67743..68171 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| SEEN513_RS00370 () | 68228..68587 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| SEEN513_RS00375 () | 68587..69033 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| SEEN513_RS00380 () | 69030..69548 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| SEEN513_RS00385 () | 69548..69778 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| SEEN513_RS00390 () | 69765..70622 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| SEEN513_RS00400 () | 70853..71380 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| SEEN513_RS00405 () | 71438..71710 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| SEEN513_RS00410 () | 71798..72091 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| SEEN513_RS00415 () | 72118..72420 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| SEEN513_RS00420 () | 72425..72775 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SEEN513_RS00425 () | 72938..73486 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| SEEN513_RS00435 () | 73827..74021 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| SEEN513_RS00440 () | 74032..74403 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| SEEN513_RS00445 () | 74396..74866 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| SEEN513_RS00450 () | 74881..75216 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| SEEN513_RS00455 () | 75313..75801 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| SEEN513_RS00460 () | 75804..76301 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| SEEN513_RS00465 () | 76516..77220 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SEEN513_RS00470 () | 77285..77464 | - | 180 | Protein_85 | helix-turn-helix transcriptional regulator | - |
| SEEN513_RS00475 () | 77771..78475 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SEEN513_RS25785 () | 78481..78621 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| SEEN513_RS00485 () | 79107..79844 | + | 738 | WP_001366550.1 | recombinase family protein | - |
| SEEN513_RS00490 () | 79841..80065 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| SEEN513_RS00495 () | 80276..81769 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| SEEN513_RS25915 () | 82238..82684 | + | 447 | Protein_91 | DUF3363 domain-containing protein | - |
| SEEN513_RS00505 () | 82901..84115 | + | 1215 | WP_000214123.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| SEEN513_RS00510 () | 84143..84448 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| SEEN513_RS00515 () | 84560..84748 | + | 189 | Protein_94 | IS91 family transposase | - |
| SEEN513_RS00520 () | 84715..85914 | - | 1200 | WP_000804063.1 | tetracycline efflux MFS transporter Tet(A) | - |
| SEEN513_RS00525 () | 86020..86670 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| SEEN513_RS00530 () | 86702..86944 | - | 243 | WP_000844627.1 | transposase | - |
| SEEN513_RS00540 () | 87250..88086 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| SEEN513_RS00545 () | 88086..88889 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| SEEN513_RS00550 () | 88950..89765 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| SEEN513_RS00560 () | 90072..90383 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| SEEN513_RS00565 () | 90557..91342 | + | 786 | WP_001151304.1 | ParA family protein | - |
| SEEN513_RS00570 () | 91346..92527 | + | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| SEEN513_RS00575 () | 92576..92848 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| SEEN513_RS00580 () | 92901..93536 | - | 636 | WP_043951511.1 | N-6 DNA methylase | - |
| SEEN513_RS25790 () | 93628..93771 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| SEEN513_RS00585 () | 94098..94475 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| SEEN513_RS25920 () | 94468..94749 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| SEEN513_RS00595 () | 94724..95398 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| SEEN513_RS00600 () | 95466..95897 | + | 432 | WP_001326170.1 | hypothetical protein | - |
| SEEN513_RS00605 () | 95903..96214 | + | 312 | WP_001447539.1 | hypothetical protein | - |
| SEEN513_RS00610 () | 96223..96723 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| SEEN513_RS00615 () | 96727..98154 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| SEEN513_RS00620 () | 98154..98810 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| SEEN513_RS00625 () | 98866..99483 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| SEEN513_RS00635 () | 99695..99994 | + | 300 | WP_001326171.1 | hypothetical protein | - |
| SEEN513_RS00640 () | 100085..100573 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| SEEN513_RS00645 () | 100588..102780 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| SEEN513_RS00650 () | 102780..103013 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| SEEN513_RS00655 () | 102995..103612 | - | 618 | WP_001249395.1 | hypothetical protein | - |
| SEEN513_RS00660 () | 103780..106752 | + | 2973 | WP_001326173.1 | TraI domain-containing protein | - |
| SEEN513_RS00665 () | 106749..108614 | + | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| SEEN513_RS00670 () | 108625..109209 | + | 585 | WP_000332868.1 | hypothetical protein | - |
| SEEN513_RS00675 () | 109166..109795 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| SEEN513_RS00680 () | 109805..110251 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| SEEN513_RS00685 () | 110261..110638 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| SEEN513_RS00690 () | 110638..111300 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| SEEN513_RS00695 () | 111624..112001 | + | 378 | WP_001326174.1 | hypothetical protein | - |
| SEEN513_RS00700 () | 112146..112427 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| SEEN513_RS00705 () | 112424..113050 | + | 627 | WP_001049717.1 | hypothetical protein | - |
| SEEN513_RS00710 () | 113034..113951 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| SEEN513_RS00715 () | 113951..115264 | + | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| SEEN513_RS00720 () | 115261..115839 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| SEEN513_RS00725 () | 115843..116235 | + | 393 | WP_000479535.1 | hypothetical protein | - |
| SEEN513_RS00730 () | 116520..117479 | + | 960 | Protein_135 | IS1380-like element ISEc9 family transposase | - |
| SEEN513_RS00735 () | 117479..118180 | - | 702 | Protein_136 | conjugal transfer protein TraC | - |
| SEEN513_RS00740 () | 118177..118884 | - | 708 | WP_001259346.1 | DsbC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|