MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 158195 bp
Accession: NZ_CP009560 Location: 1..158195 Organism: Salmonella enterica subsp. enterica serovar Newport str. CVM 22425 Replicon: plasmid pCVM22425
Accession: NZ_CP009560 Location: 1..158195 Organism: Salmonella enterica subsp. enterica serovar Newport str. CVM 22425 Replicon: plasmid pCVM22425
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEEN425_RS00015 () | 1805..2121 | + | 317 | Protein_1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| SEEN425_RS00020 () | 2118..2650 | - | 533 | Protein_2 | lipocalin family protein | - |
| SEEN425_RS00025 () | 2744..3889 | - | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| SEEN425_RS00030 () | 4213..4521 | - | 309 | Protein_4 | IS1380 family transposase | - |
| SEEN425_RS00035 () | 4708..5970 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| SEEN425_RS00040 () | 6294..7439 | + | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| SEEN425_RS00045 () | 7533..8066 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| SEEN425_RS00050 () | 8063..8380 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| SEEN425_RS00060 () | 9108..14594 | + | 5487 | WP_000606835.1 | DUF4165 domain-containing protein | - |
| SEEN425_RS00065 () | 14743..15450 | + | 708 | WP_001259346.1 | DsbC family protein | - |
| SEEN425_RS00070 () | 15447..17894 | + | 2448 | WP_000637384.1 | type IV secretion system protein TraC | - |
| SEEN425_RS00075 () | 17909..18226 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| SEEN425_RS00080 () | 18223..18753 | + | 531 | WP_001010740.1 | S26 family signal peptidase | - |
| SEEN425_RS00085 () | 18716..19981 | + | 1266 | WP_001447719.1 | conjugal transfer protein TraW | - |
| SEEN425_RS00090 () | 19978..20649 | + | 672 | WP_000575345.1 | EAL domain-containing protein | - |
| SEEN425_RS00095 () | 20646..21653 | + | 1008 | WP_000983282.1 | TraU family protein | - |
| SEEN425_RS00100 () | 21757..24564 | + | 2808 | WP_001447718.1 | conjugal transfer mating pair stabilization protein TraN | - |
| SEEN425_RS00105 () | 24603..25463 | - | 861 | WP_000709517.1 | hypothetical protein | - |
| SEEN425_RS00110 () | 25586..26227 | - | 642 | WP_000796664.1 | hypothetical protein | - |
| SEEN425_RS00115 () | 26522..26842 | + | 321 | WP_000547566.1 | hypothetical protein | - |
| SEEN425_RS00120 () | 27146..27331 | + | 186 | WP_001186917.1 | hypothetical protein | - |
| SEEN425_RS00125 () | 27551..28519 | + | 969 | WP_000085160.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| SEEN425_RS00130 () | 28530..29438 | + | 909 | WP_000739139.1 | hypothetical protein | - |
| SEEN425_RS00135 () | 29499..30029 | + | 531 | WP_000987165.1 | single-stranded DNA-binding protein | - |
| SEEN425_RS00140 () | 30124..31113 | + | 990 | WP_001282585.1 | phage recombination protein Bet | - |
| SEEN425_RS00145 () | 31176..32186 | + | 1011 | WP_000706865.1 | YqaJ viral recombinase family protein | - |
| SEEN425_RS00150 () | 32384..33661 | + | 1278 | WP_000170087.1 | DUF3150 domain-containing protein | - |
| SEEN425_RS00155 () | 33746..35541 | + | 1796 | Protein_28 | VWA domain-containing protein | - |
| SEEN425_RS00160 () | 35603..35938 | + | 336 | WP_001447572.1 | hypothetical protein | - |
| SEEN425_RS00165 () | 36203..36742 | + | 540 | WP_000018872.1 | hypothetical protein | - |
| SEEN425_RS00170 () | 36833..37333 | + | 501 | WP_000793769.1 | hypothetical protein | - |
| SEEN425_RS00175 () | 37407..38291 | + | 885 | WP_000477209.1 | hypothetical protein | - |
| SEEN425_RS00180 () | 38357..38581 | + | 225 | WP_001102700.1 | 2Fe-2S ferredoxin-like protein | - |
| SEEN425_RS00185 () | 38643..39032 | + | 390 | WP_000026577.1 | hypothetical protein | - |
| SEEN425_RS00190 () | 39022..39474 | + | 453 | WP_001176699.1 | hypothetical protein | - |
| SEEN425_RS00200 () | 39812..40003 | + | 192 | WP_000651508.1 | hypothetical protein | - |
| SEEN425_RS00205 () | 40048..40425 | + | 378 | WP_001337696.1 | hypothetical protein | - |
| SEEN425_RS00210 () | 40617..40961 | + | 345 | WP_000209093.1 | hypothetical protein | - |
| SEEN425_RS00215 () | 41039..41341 | + | 303 | WP_000410925.1 | hypothetical protein | - |
| SEEN425_RS00220 () | 41419..43044 | + | 1626 | WP_000201432.1 | DNA cytosine methyltransferase | - |
| SEEN425_RS00225 () | 43105..43536 | + | 432 | WP_000687894.1 | hypothetical protein | - |
| SEEN425_RS00230 () | 43610..44164 | + | 555 | WP_001093867.1 | hypothetical protein | - |
| SEEN425_RS00235 () | 44397..44783 | + | 387 | WP_000042274.1 | hypothetical protein | - |
| SEEN425_RS00240 () | 44871..47324 | + | 2454 | WP_001187969.1 | phosphoadenosine phosphosulfate reductase | - |
| SEEN425_RS00245 () | 47526..47729 | + | 204 | WP_000050847.1 | hypothetical protein | - |
| SEEN425_RS00250 () | 47801..48406 | + | 606 | WP_000071870.1 | 5'-deoxynucleotidase | - |
| SEEN425_RS00255 () | 48399..48668 | + | 270 | WP_000184110.1 | hypothetical protein | - |
| SEEN425_RS00260 () | 48682..48900 | + | 219 | WP_000260293.1 | hypothetical protein | - |
| SEEN425_RS00265 () | 48974..49531 | + | 558 | WP_000064432.1 | hypothetical protein | - |
| SEEN425_RS00270 () | 49606..50457 | + | 852 | WP_000595210.1 | hypothetical protein | - |
| SEEN425_RS00275 () | 50916..51302 | + | 387 | WP_001077336.1 | hypothetical protein | - |
| SEEN425_RS00280 () | 51480..53207 | + | 1728 | WP_000122922.1 | toprim domain-containing protein | - |
| SEEN425_RS00285 () | 53194..53472 | + | 279 | WP_000268337.1 | hypothetical protein | - |
| SEEN425_RS00290 () | 53545..53766 | + | 222 | WP_000714163.1 | hypothetical protein | - |
| SEEN425_RS00295 () | 53948..54952 | - | 1005 | WP_000427619.1 | IS110-like element IS5075 family transposase | - |
| SEEN425_RS00300 () | 55031..56935 | - | 1905 | Protein_56 | Tn3 family transposase | - |
| SEEN425_RS00305 () | 56991..57695 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SEEN425_RS00310 () | 57758..58462 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| SEEN425_RS00315 () | 58672..59661 | - | 990 | WP_001276635.1 | DUF3330 domain-containing protein | - |
| SEEN425_RS00320 () | 59658..59894 | - | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| SEEN425_RS00325 () | 59891..60256 | - | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| SEEN425_RS00330 () | 60368..61006 | - | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| SEEN425_RS00335 () | 61021..62706 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| SEEN425_RS00340 () | 62778..63053 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| SEEN425_RS00345 () | 63069..63419 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| SEEN425_RS00350 () | 63491..63925 | + | 435 | WP_000414383.1 | mercury resistance transcriptional regulator MerR | - |
| SEEN425_RS00355 () | 64025..65029 | + | 1005 | WP_000427623.1 | IS110-like element IS4321 family transposase | - |
| SEEN425_RS26150 () | 65306..65425 | + | 120 | Protein_68 | permease | - |
| SEEN425_RS26155 () | 65435..65551 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| SEEN425_RS00365 () | 65672..66046 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| SEEN425_RS00370 () | 66160..66885 | + | 726 | WP_000988731.1 | hypothetical protein | - |
| SEEN425_RS00380 () | 67018..71271 | + | 4254 | WP_001257735.1 | RHS domain-containing protein | - |
| SEEN425_RS00385 () | 71243..71683 | + | 441 | WP_001326394.1 | hypothetical protein | - |
| SEEN425_RS26165 () | 71854..72306 | + | 453 | Protein_74 | hypothetical protein | - |
| SEEN425_RS00395 () | 72322..72924 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| SEEN425_RS00400 () | 73194..73475 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| SEEN425_RS00410 () | 73774..74310 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| SEEN425_RS00415 () | 74313..75323 | + | 1011 | WP_000543934.1 | tyrosine-type recombinase/integrase | - |
| SEEN425_RS00420 () | 75328..76197 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| SEEN425_RS00425 () | 76194..76685 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| SEEN425_RS00430 () | 77012..77887 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| SEEN425_RS00435 () | 78049..79089 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| SEEN425_RS00445 () | 79376..80887 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| SEEN425_RS00450 () | 80998..82038 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| SEEN425_RS00455 () | 82040..83473 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| SEEN425_RS00460 () | 83486..87100 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| SEEN425_RS00465 () | 87138..87500 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| SEEN425_RS00470 () | 88216..88488 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| SEEN425_RS00475 () | 88488..89021 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| SEEN425_RS00480 () | 89032..89640 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| SEEN425_RS00485 () | 89637..90187 | + | 551 | Protein_91 | regulator | - |
| SEEN425_RS00490 () | 90247..90666 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| SEEN425_RS00495 () | 90668..90961 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| SEEN425_RS00500 () | 90978..91961 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| SEEN425_RS00505 () | 92460..92999 | + | 540 | WP_001447712.1 | hypothetical protein | - |
| SEEN425_RS00510 () | 93004..93291 | + | 288 | WP_000127321.1 | hypothetical protein | - |
| SEEN425_RS00515 () | 93276..94376 | + | 1101 | WP_000350011.1 | plasmid replication protein | - |
| SEEN425_RS00530 () | 95413..95847 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| SEEN425_RS00535 () | 95865..96980 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| SEEN425_RS00540 () | 97249..97857 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| SEEN425_RS00545 () | 97862..98383 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| SEEN425_RS00550 () | 98386..98907 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| SEEN425_RS00555 () | 99004..99477 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| SEEN425_RS00560 () | 99488..99781 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| SEEN425_RS00565 () | 99786..100640 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| SEEN425_RS00570 () | 100640..101599 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| SEEN425_RS00575 () | 101615..102475 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| SEEN425_RS00580 () | 102509..102937 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| SEEN425_RS00585 () | 102994..103353 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| SEEN425_RS00590 () | 103353..103799 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| SEEN425_RS00595 () | 103796..104314 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| SEEN425_RS00600 () | 104314..104544 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| SEEN425_RS00605 () | 104531..105388 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| SEEN425_RS00615 () | 105619..106146 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| SEEN425_RS00620 () | 106204..106476 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| SEEN425_RS00625 () | 106564..106857 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| SEEN425_RS00630 () | 106884..107186 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| SEEN425_RS00635 () | 107191..107541 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SEEN425_RS00640 () | 107704..108252 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| SEEN425_RS00650 () | 108593..108787 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| SEEN425_RS00655 () | 108798..109169 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| SEEN425_RS00660 () | 109162..109632 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| SEEN425_RS00665 () | 109647..109982 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| SEEN425_RS00670 () | 110079..110567 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| SEEN425_RS00675 () | 110570..111067 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| SEEN425_RS00680 () | 111282..111986 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SEEN425_RS00685 () | 112051..112230 | - | 180 | Protein_127 | helix-turn-helix transcriptional regulator | - |
| SEEN425_RS00690 () | 112537..113241 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SEEN425_RS26075 () | 113247..113387 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| SEEN425_RS00700 () | 113873..114610 | + | 738 | WP_001366550.1 | recombinase family protein | - |
| SEEN425_RS00705 () | 114607..114831 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| SEEN425_RS00710 () | 115042..116535 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| SEEN425_RS26225 () | 117004..117450 | + | 447 | Protein_133 | DUF3363 domain-containing protein | - |
| SEEN425_RS00720 () | 117667..118881 | + | 1215 | WP_000214123.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| SEEN425_RS00725 () | 118909..119214 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| SEEN425_RS00730 () | 119326..119514 | + | 189 | Protein_136 | IS91 family transposase | - |
| SEEN425_RS00735 () | 119481..120680 | - | 1200 | WP_000804063.1 | tetracycline efflux MFS transporter Tet(A) | - |
| SEEN425_RS00740 () | 120786..121436 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| SEEN425_RS00745 () | 121468..121710 | - | 243 | WP_000844627.1 | transposase | - |
| SEEN425_RS00755 () | 122016..122852 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| SEEN425_RS00760 () | 122852..123655 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| SEEN425_RS00765 () | 123716..124531 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| SEEN425_RS00775 () | 124838..125149 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| SEEN425_RS00780 () | 125323..126108 | + | 786 | WP_001151304.1 | ParA family protein | - |
| SEEN425_RS00785 () | 126112..127293 | + | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| SEEN425_RS00790 () | 127342..127614 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| SEEN425_RS00795 () | 127667..128302 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| SEEN425_RS26080 () | 128394..128537 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| SEEN425_RS00800 () | 128864..129241 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| SEEN425_RS26230 () | 129234..129515 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| SEEN425_RS00810 () | 129490..130164 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| SEEN425_RS00815 () | 130232..130663 | + | 432 | WP_001326170.1 | hypothetical protein | - |
| SEEN425_RS00820 () | 130669..130980 | + | 312 | WP_001447539.1 | hypothetical protein | - |
| SEEN425_RS00825 () | 130989..131489 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| SEEN425_RS00830 () | 131493..132920 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| SEEN425_RS00835 () | 132920..133576 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| SEEN425_RS00840 () | 133632..134249 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| SEEN425_RS00850 () | 134461..134760 | + | 300 | WP_001326171.1 | hypothetical protein | - |
| SEEN425_RS00855 () | 134851..135339 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| SEEN425_RS00860 () | 135354..137546 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| SEEN425_RS00865 () | 137546..137779 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| SEEN425_RS00870 () | 137761..138378 | - | 618 | WP_001249395.1 | hypothetical protein | - |
| SEEN425_RS00875 () | 138546..141518 | + | 2973 | WP_001326173.1 | TraI domain-containing protein | - |
| SEEN425_RS00880 () | 141515..143380 | + | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| SEEN425_RS00885 () | 143391..143975 | + | 585 | WP_000332868.1 | hypothetical protein | - |
| SEEN425_RS00890 () | 143932..144561 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| SEEN425_RS00895 () | 144571..145017 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| SEEN425_RS00900 () | 145027..145404 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| SEEN425_RS00905 () | 145404..146066 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| SEEN425_RS00910 () | 146390..146767 | + | 378 | WP_001326174.1 | hypothetical protein | - |
| SEEN425_RS00915 () | 146912..147193 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| SEEN425_RS00920 () | 147190..147816 | + | 627 | WP_001049717.1 | hypothetical protein | - |
| SEEN425_RS00925 () | 147800..148717 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| SEEN425_RS00930 () | 148717..150030 | + | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| SEEN425_RS00935 () | 150027..150605 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| SEEN425_RS00940 () | 150609..151001 | + | 393 | WP_000479535.1 | hypothetical protein | - |
| SEEN425_RS00945 () | 151286..152245 | + | 960 | Protein_177 | IS1380-like element ISEc9 family transposase | - |
| SEEN425_RS00950 () | 152245..152946 | - | 702 | Protein_178 | conjugal transfer protein TraC | - |
| SEEN425_RS00955 () | 152943..153650 | - | 708 | WP_001259346.1 | DsbC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|