MGE detailed information
MGE type: Prophage MGE length: 45768 bp
Accession: NZ_CP009553 Location: 3169601..3215368 Organism: Pandoraea pnomenusa strain DSM 16536 Replicon: chromosome
Accession: NZ_CP009553 Location: 3169601..3215368 Organism: Pandoraea pnomenusa strain DSM 16536 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LV28_RS48765 () | 3165607..3166857 | + | 1251 | WP_147291559.1 | hypothetical protein | - |
| LV28_RS38075 () | 3166911..3167168 | - | 258 | WP_038617168.1 | hypothetical protein | - |
| LV28_RS38080 () | 3167186..3167443 | - | 258 | WP_038617165.1 | hypothetical protein | - |
| LV28_RS48770 () | 3167778..3168203 | - | 426 | WP_147291557.1 | hypothetical protein | - |
| LV28_RS38095 () | 3168200..3168583 | - | 384 | WP_052408596.1 | DUF1353 domain-containing protein | - |
| LV28_RS38100 () | 3168580..3168972 | - | 393 | WP_155765753.1 | hypothetical protein | - |
| LV28_RS48775 () | 3169038..3169250 | + | 213 | WP_147291555.1 | hypothetical protein | - |
| LV28_RS38110 () | 3169330..3169527 | - | 198 | WP_038617151.1 | hypothetical protein | - |
| LV28_RS48780 () | 3169601..3170260 | - | 660 | WP_147291554.1 | hypothetical protein | - |
| LV28_RS38115 () | 3170313..3170822 | - | 510 | WP_038617145.1 | hypothetical protein | - |
| LV28_RS38120 () | 3170827..3171123 | - | 297 | WP_038617144.1 | phage holin family protein | - |
| LV28_RS38125 () | 3171138..3171668 | - | 531 | WP_038617141.1 | glycoside hydrolase family 104 protein | - |
| LV28_RS38130 () | 3171695..3172201 | - | 507 | WP_038617139.1 | DUF4376 domain-containing protein | - |
| LV28_RS38135 () | 3172212..3173588 | - | 1377 | WP_147291553.1 | hypothetical protein | - |
| LV28_RS38140 () | 3173604..3174278 | - | 675 | WP_038620882.1 | hypothetical protein | - |
| LV28_RS38145 () | 3174275..3175399 | - | 1125 | WP_038620879.1 | baseplate J/gp47 family protein | - |
| LV28_RS38150 () | 3175396..3175797 | - | 402 | WP_038620876.1 | hypothetical protein | - |
| LV28_RS38155 () | 3175797..3176450 | - | 654 | WP_052408642.1 | hypothetical protein | - |
| LV28_RS38160 () | 3176447..3177577 | - | 1131 | WP_038620873.1 | hypothetical protein | - |
| LV28_RS38165 () | 3177570..3178529 | - | 960 | WP_038620871.1 | hypothetical protein | - |
| LV28_RS38170 () | 3178526..3180514 | - | 1989 | WP_038620870.1 | hypothetical protein | - |
| LV28_RS38175 () | 3180513..3180767 | + | 255 | WP_038620868.1 | hypothetical protein | - |
| LV28_RS38180 () | 3180764..3181255 | - | 492 | WP_038620866.1 | bacteriophage-related protein | - |
| LV28_RS38185 () | 3181422..3181787 | - | 366 | WP_038620864.1 | hypothetical protein | - |
| LV28_RS38190 () | 3181789..3182220 | - | 432 | WP_038620861.1 | hypothetical protein | - |
| LV28_RS38195 () | 3182361..3183905 | - | 1545 | WP_038620859.1 | tail protein | - |
| LV28_RS48990 () | 3183969..3184133 | - | 165 | WP_169834578.1 | hypothetical protein | - |
| LV28_RS38200 () | 3184141..3184971 | - | 831 | WP_048806610.1 | hypothetical protein | - |
| LV28_RS38205 () | 3184971..3185642 | - | 672 | WP_038620856.1 | hypothetical protein | - |
| LV28_RS38210 () | 3185651..3186052 | - | 402 | WP_038620853.1 | hypothetical protein | - |
| LV28_RS38215 () | 3186053..3186358 | - | 306 | WP_038620851.1 | hypothetical protein | - |
| LV28_RS38220 () | 3186428..3187570 | - | 1143 | WP_081327008.1 | P22 coat - protein 5 family protein | - |
| LV28_RS38225 () | 3187784..3188557 | - | 774 | WP_038620845.1 | hypothetical protein | - |
| LV28_RS38230 () | 3188693..3190081 | - | 1389 | WP_038620842.1 | DUF4055 domain-containing protein | - |
| LV28_RS38235 () | 3190095..3191348 | - | 1254 | WP_115344660.1 | terminase family protein | - |
| LV28_RS38240 () | 3191362..3191844 | - | 483 | WP_115344510.1 | hypothetical protein | - |
| LV28_RS38245 () | 3191978..3193351 | - | 1374 | WP_038620835.1 | chromosome partitioning protein ParB | - |
| LV28_RS38250 () | 3193491..3193841 | + | 351 | WP_058371660.1 | hypothetical protein | - |
| LV28_RS38255 () | 3194078..3194269 | + | 192 | WP_038620832.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LV28_RS38260 () | 3194266..3194661 | + | 396 | WP_038620831.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LV28_RS38265 () | 3194684..3194935 | + | 252 | WP_038620829.1 | hypothetical protein | - |
| LV28_RS38270 () | 3195037..3195663 | - | 627 | WP_048806609.1 | hypothetical protein | - |
| LV28_RS38275 () | 3195696..3196166 | - | 471 | WP_038622431.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LV28_RS38280 () | 3196163..3196366 | - | 204 | WP_058371661.1 | hypothetical protein | - |
| LV28_RS38285 () | 3196369..3197145 | - | 777 | WP_048806608.1 | hypothetical protein | - |
| LV28_RS48395 () | 3197096..3198007 | - | 912 | WP_081326897.1 | YdaU family protein | - |
| LV28_RS38295 () | 3198004..3198483 | - | 480 | WP_038620828.1 | hypothetical protein | - |
| LV28_RS38300 () | 3198485..3198895 | - | 411 | WP_145929451.1 | hypothetical protein | - |
| LV28_RS38305 () | 3199288..3199782 | - | 495 | WP_038620825.1 | hypothetical protein | - |
| LV28_RS38310 () | 3199919..3200116 | - | 198 | WP_038620822.1 | hypothetical protein | - |
| LV28_RS38315 () | 3200208..3200882 | + | 675 | WP_038620819.1 | XRE family transcriptional regulator | - |
| LV28_RS38320 () | 3201239..3201865 | + | 627 | WP_038622422.1 | XRE family transcriptional regulator | - |
| LV28_RS38325 () | 3201910..3202641 | + | 732 | WP_038620817.1 | hypothetical protein | - |
| LV28_RS38330 () | 3202659..3203348 | + | 690 | WP_038620814.1 | hypothetical protein | - |
| LV28_RS38335 () | 3204064..3204255 | + | 192 | WP_038620811.1 | hypothetical protein | - |
| LV28_RS38340 () | 3204257..3204577 | + | 321 | WP_038620809.1 | hypothetical protein | - |
| LV28_RS48785 () | 3204574..3204717 | + | 144 | WP_155765754.1 | hypothetical protein | - |
| LV28_RS48790 () | 3204717..3204860 | + | 144 | WP_155765755.1 | hypothetical protein | - |
| LV28_RS38345 () | 3204984..3205790 | + | 807 | WP_038620807.1 | PD-(D/E)XK nuclease family protein | - |
| LV28_RS38350 () | 3205800..3206918 | + | 1119 | WP_038620804.1 | hypothetical protein | - |
| LV28_RS38355 () | 3207034..3207894 | + | 861 | WP_038620801.1 | cell division protein FtsK | - |
| LV28_RS38360 () | 3207899..3209638 | + | 1740 | WP_038620798.1 | AAA family ATPase | - |
| LV28_RS38365 () | 3209635..3210549 | + | 915 | WP_038620796.1 | hypothetical protein | - |
| LV28_RS38370 () | 3210549..3211370 | + | 822 | WP_052408641.1 | hypothetical protein | - |
| LV28_RS38375 () | 3211606..3212439 | + | 834 | WP_038620795.1 | DNA adenine methylase | - |
| LV28_RS38380 () | 3212445..3213602 | + | 1158 | WP_038622417.1 | DNA (cytosine-5-)-methyltransferase | - |
| LV28_RS38385 () | 3213641..3213874 | - | 234 | WP_023873966.1 | hypothetical protein | - |
| LV28_RS38390 () | 3213964..3214194 | + | 231 | WP_048806607.1 | DUF4224 domain-containing protein | - |
| LV28_RS38395 () | 3214160..3215368 | + | 1209 | WP_147291625.1 | hypothetical protein | - |
| LV28_RS38405 () | 3215728..3216741 | - | 1014 | WP_023596485.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| LV28_RS38410 () | 3216981..3217865 | + | 885 | WP_023596487.1 | EamA family transporter | - |
| LV28_RS38415 () | 3217943..3218476 | - | 534 | WP_081255978.1 | GNAT family N-acetyltransferase | - |
| LV28_RS38425 () | 3218770..3219402 | + | 633 | WP_048806605.1 | NUDIX hydrolase | - |
| LV28_RS38430 () | 3219489..3220253 | + | 765 | WP_038620789.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|