MGE detailed information
MGE type: Genomic_island MGE length: 8264 bp
Accession: NZ_CP009533 Location: 4541660..4549923 Organism: Pseudomonas rhizosphaerae strain DSM 16299 Replicon: chromosome
Accession: NZ_CP009533 Location: 4541660..4549923 Organism: Pseudomonas rhizosphaerae strain DSM 16299 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LT40_RS20210 () | 4537884..4539461 | + | 1578 | WP_043192994.1 | glutamine-hydrolyzing GMP synthase | - |
| LT40_RS20215 () | 4539769..4540977 | + | 1209 | WP_043192996.1 | site-specific integrase | - |
| LT40_RS21475 () | 4541285..4541515 | + | 231 | WP_043192998.1 | AlpA family phage regulatory protein | - |
| LT40_RS20225 () | 4541519..4541830 | + | 312 | Protein_3997 | AAA family ATPase | - |
| LT40_RS20230 () | 4542228..4542853 | - | 626 | Protein_3998 | P-type conjugative transfer protein TrbJ | - |
| LT40_RS21655 () | 4544171..4548160 | + | 3990 | WP_148308592.1 | hypothetical protein | - |
| LT40_RS21770 () | 4548744..4548920 | + | 177 | WP_167335529.1 | hypothetical protein | - |
| LT40_RS20235 () | 4549253..4549507 | + | 255 | WP_043193000.1 | plasmid stabilization protein | Antitoxin Detail |
| LT40_RS20240 () | 4549504..4549923 | + | 420 | WP_043193001.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LT40_RS20245 () | 4549993..4550364 | - | 372 | WP_043193003.1 | PH domain-containing protein | - |
| LT40_RS20250 () | 4550630..4553134 | + | 2505 | WP_043193005.1 | membrane-targeted effector domain-containing toxin | - |
| LT40_RS20255 () | 4553458..4554831 | + | 1374 | WP_043193006.1 | multicopper oxidase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|