MGE detailed information
MGE type: Genomic_island MGE length: 31342 bp
Accession: NZ_CP009508 Location: 1104395..1135736 Organism: Methanosarcina siciliae C2J Replicon: chromosome
Accession: NZ_CP009508 Location: 1104395..1135736 Organism: Methanosarcina siciliae C2J Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MSSAC_RS04770 | 1100558..1100902 | + | 345 | WP_048180322.1 | hypothetical protein | - |
| MSSAC_RS04775 (MSSAC_0905) | 1102169..1103146 | + | 978 | WP_231593613.1 | MarR family transcriptional regulator | - |
| MSSAC_RS04780 | 1103828..1104181 | - | 354 | WP_156157265.1 | hypothetical protein | - |
| MSSAC_RS04785 (MSSAC_0907) | 1104395..1104706 | - | 312 | WP_156157266.1 | hypothetical protein | - |
| MSSAC_RS04795 (MSSAC_0908) | 1105991..1106617 | + | 627 | WP_048180338.1 | hypothetical protein | - |
| MSSAC_RS04800 (MSSAC_0909) | 1107189..1107431 | - | 243 | WP_048170433.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| MSSAC_RS04805 (MSSAC_0910) | 1107432..1107650 | - | 219 | WP_048170435.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| MSSAC_RS04810 (MSSAC_0911) | 1108160..1109248 | + | 1089 | Protein_958 | IS110 family transposase ISMba7 | Transposase |
| MSSAC_RS04815 (MSSAC_0912) | 1109776..1111254 | + | 1479 | WP_048185671.1 | group II intron reverse transcriptase/maturase | - |
| MSSAC_RS25190 (MSSAC_0913) | 1111392..1111544 | + | 153 | Protein_960 | IS110 family transposase ISMba20 | Transposase |
| MSSAC_RS23895 | 1111806..1112200 | + | 395 | Protein_961 | transposase | - |
| MSSAC_RS04825 (MSSAC_0914) | 1112234..1113394 | - | 1161 | WP_048180344.1 | IS630 family transposase ISMac13 | Transposase |
| MSSAC_RS25195 | 1113454..1113811 | + | 358 | Protein_963 | transposase | - |
| MSSAC_RS04835 (MSSAC_0916) | 1115354..1116250 | + | 897 | WP_048180348.1 | hypothetical protein | - |
| MSSAC_RS04840 (MSSAC_0917) | 1116405..1117256 | - | 852 | Protein_965 | IS66 family transposase ISMac24 | Transposase |
| MSSAC_RS04845 (MSSAC_0918) | 1117465..1119186 | - | 1722 | WP_048180351.1 | IS1634 family transposase | - |
| MSSAC_RS04850 (MSSAC_0919) | 1119330..1120043 | - | 714 | WP_052727181.1 | IS66 family transposase ISMbu5 | Transposase |
| MSSAC_RS04865 (MSSAC_0922) | 1121549..1121839 | - | 291 | WP_197082118.1 | GNAT family N-acetyltransferase | - |
| MSSAC_RS04870 | 1122719..1123039 | - | 321 | WP_156157268.1 | hypothetical protein | - |
| MSSAC_RS04875 | 1123190..1123429 | + | 240 | WP_156157269.1 | hypothetical protein | - |
| MSSAC_RS25200 (MSSAC_0923) | 1123890..1124321 | + | 432 | WP_156157270.1 | DUF6011 domain-containing protein | - |
| MSSAC_RS04885 (MSSAC_0924) | 1124627..1125724 | + | 1098 | WP_231593614.1 | replication endonuclease | - |
| MSSAC_RS04890 (MSSAC_0925) | 1125889..1127040 | - | 1152 | WP_048180377.1 | ISH3 family transposase ISMbu7 | Transposase |
| MSSAC_RS04895 (MSSAC_0926) | 1127198..1129966 | - | 2769 | WP_082092932.1 | hypothetical protein | - |
| MSSAC_RS04900 (MSSAC_0927) | 1129993..1131339 | - | 1347 | WP_082092933.1 | SMP-30/gluconolactonase/LRE family protein | - |
| MSSAC_RS04905 (MSSAC_0928) | 1131872..1133407 | + | 1536 | WP_048180380.1 | transposase | - |
| MSSAC_RS26995 | 1133494..1133667 | - | 174 | Protein_978 | IS1634 family transposase | - |
| MSSAC_RS23910 | 1133660..1133984 | - | 325 | Protein_979 | transposase | - |
| MSSAC_RS04910 (MSSAC_0929) | 1134125..1134733 | + | 609 | WP_231593615.1 | hypothetical protein ; Integrase | Integrase |
| MSSAC_RS04915 (MSSAC_0930) | 1134789..1135217 | - | 429 | WP_048180386.1 | hypothetical protein | - |
| MSSAC_RS04920 (MSSAC_0931) | 1136153..1136344 | + | 192 | WP_048180394.1 | hypothetical protein | - |
| MSSAC_RS04925 | 1136341..1136604 | + | 264 | WP_048180400.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| MSSAC_RS04930 (MSSAC_0932) | 1136849..1137148 | + | 300 | WP_048180404.1 | hypothetical protein | - |
| MSSAC_RS04935 (MSSAC_0933) | 1137161..1137541 | + | 381 | WP_048180408.1 | hypothetical protein | - |
| MSSAC_RS04940 (MSSAC_0934) | 1137538..1139550 | + | 2013 | WP_048180410.1 | hypothetical protein | - |
| MSSAC_RS04945 (MSSAC_0935) | 1139547..1140539 | + | 993 | WP_048180414.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|