MGE detailed information
MGE type: Genomic_island MGE length: 28982 bp
Accession: NZ_CP009505 Location: 1822306..1851287 Organism: Methanosarcina sp. MTP4 Replicon: chromosome
Accession: NZ_CP009505 Location: 1822306..1851287 Organism: Methanosarcina sp. MTP4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MSMTP_RS07715 | 1817443..1817631 | + | 189 | WP_048178517.1 | hypothetical protein | - |
| MSMTP_RS07720 (MSMTP_1411) | 1818144..1821032 | + | 2889 | WP_082090545.1 | PocR ligand-binding domain-containing protein | - |
| MSMTP_RS07725 (MSMTP_1413) | 1821837..1822037 | + | 201 | WP_048178518.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| MSMTP_RS07730 (MSMTP_1414) | 1822306..1822941 | + | 636 | WP_231582960.1 | undecaprenyl diphosphate synthase family protein | - |
| MSMTP_RS07735 | 1823559..1823876 | + | 318 | WP_156153736.1 | hypothetical protein | - |
| MSMTP_RS07740 (MSMTP_1415) | 1824039..1824971 | - | 933 | WP_052718318.1 | Fic family protein | - |
| MSMTP_RS07745 (MSMTP_1417) | 1825249..1825605 | - | 357 | WP_231582961.1 | hypothetical protein | - |
| MSMTP_RS07755 (MSMTP_1418) | 1826324..1827799 | + | 1476 | WP_048178522.1 | TPR repeat-containing protein YrrB | VF |
| MSMTP_RS07760 (MSMTP_1419) | 1828740..1829060 | + | 321 | WP_231582962.1 | hypothetical protein | - |
| MSMTP_RS07765 | 1829057..1829416 | + | 360 | WP_048178524.1 | DUF6516 family protein | - |
| MSMTP_RS07775 | 1830377..1830556 | + | 180 | WP_048178526.1 | hypothetical protein | - |
| MSMTP_RS07780 (MSMTP_1420) | 1831323..1831586 | + | 264 | WP_048178527.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| MSMTP_RS07785 | 1831579..1831767 | + | 189 | WP_231582963.1 | type II toxin-antitoxin system HicA family toxin | - |
| MSMTP_RS07790 (MSMTP_1421) | 1831770..1832012 | + | 243 | WP_048178529.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| MSMTP_RS07795 (MSMTP_1422) | 1832315..1834966 | + | 2652 | WP_156153737.1 | UvrD-helicase domain-containing protein | - |
| MSMTP_RS07800 (MSMTP_1423) | 1835545..1837083 | + | 1539 | WP_048178531.1 | FG-GAP-like repeat-containing protein | - |
| MSMTP_RS07805 (MSMTP_1424) | 1837490..1837708 | + | 219 | WP_048178532.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| MSMTP_RS07810 (MSMTP_1425) | 1837709..1837933 | + | 225 | WP_048178533.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| MSMTP_RS19695 (MSMTP_1426) | 1838449..1839711 | + | 1263 | WP_048178534.1 | zinc finger AN1 domain-containing stress-associated protein | - |
| MSMTP_RS07820 (MSMTP_1427) | 1839867..1840331 | + | 465 | WP_048178535.1 | hypothetical protein | - |
| MSMTP_RS07825 (MSMTP_1428) | 1840508..1841242 | - | 735 | WP_048178536.1 | hypothetical protein | - |
| MSMTP_RS07830 (MSMTP_1429) | 1841379..1843016 | - | 1638 | WP_048177107.1 | IS1634 family transposase ISArch8 | Transposase |
| MSMTP_RS07835 (MSMTP_1430) | 1843755..1848209 | - | 4455 | WP_048178537.1 | AAA domain-containing protein | - |
| MSMTP_RS07840 (MSMTP_1431) | 1848483..1851287 | - | 2805 | WP_052718319.1 | HEAT repeat domain-containing protein | - |
| MSMTP_RS07845 (MSMTP_1432) | 1851575..1852762 | - | 1188 | WP_048178538.1 | argininosuccinate synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|