MGE detailed information
MGE type: Prophage MGE length: 40132 bp
Accession: NZ_CP009456 Location: 2628701..2668832 Organism: Yersinia enterocolitica strain FORC_002 Replicon: chromosome
Accession: NZ_CP009456 Location: 2628701..2668832 Organism: Yersinia enterocolitica strain FORC_002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LI89_RS11875 () | 2624931..2626079 | - | 1149 | WP_019079663.1 | galactonate dehydratase | - |
| LI89_RS11880 () | 2626076..2626693 | - | 618 | WP_019079664.1 | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | - |
| LI89_RS11885 () | 2626677..2627573 | - | 897 | WP_019079665.1 | 2-dehydro-3-deoxygalactonokinase | - |
| LI89_RS11890 () | 2627570..2628268 | - | 699 | WP_019079666.1 | D-galactonate utilization transcriptional regulator DgoR | - |
| LI89_RS11895 () | 2628701..2629867 | - | 1167 | WP_046695685.1 | class C beta-lactamase | - |
| LI89_RS11900 () | 2630002..2630886 | + | 885 | WP_019083269.1 | LysR family transcriptional regulator AmpR | - |
| LI89_RS11905 () | 2630993..2631649 | - | 657 | WP_019079669.1 | DUF533 domain-containing protein | - |
| LI89_RS11910 () | 2631951..2632835 | - | 885 | WP_046050800.1 | triacylglycerol lipase | - |
| LI89_RS11915 () | 2632993..2633475 | - | 483 | WP_046050799.1 | lysozyme | - |
| LI89_RS11920 () | 2633477..2633653 | - | 177 | WP_005161370.1 | phage holin family protein | - |
| LI89_RS11925 () | 2633880..2634056 | + | 177 | WP_005170265.1 | GhoT/OrtT family toxin | - |
| LI89_RS11930 () | 2634232..2634651 | - | 420 | WP_019083270.1 | antitermination protein Q | - |
| LI89_RS11940 () | 2635402..2636046 | - | 645 | WP_046050798.1 | Chloramphenicol acetyltransferase | VF |
| LI89_RS11945 () | 2636447..2636866 | + | 420 | WP_026018244.1 | helix-turn-helix domain-containing protein | - |
| LI89_RS11950 () | 2637377..2639116 | + | 1740 | WP_046050796.1 | putative ABC transporter ATP-binding protein YheS | VF |
| LI89_RS22320 () | 2639584..2640175 | + | 592 | Protein_2317 | hypothetical protein | - |
| LI89_RS11960 () | 2640198..2640485 | + | 288 | WP_071843371.1 | hypothetical protein | - |
| LI89_RS22765 () | 2640482..2640892 | + | 411 | WP_080343453.1 | hypothetical protein | - |
| LI89_RS11975 () | 2640873..2642041 | + | 1169 | WP_154237416.1 | IS3 family transposase ISLad1 | Transposase |
| LI89_RS11980 () | 2642437..2642649 | - | 213 | WP_046694919.1 | hypothetical protein | - |
| LI89_RS11985 () | 2643021..2643647 | - | 627 | Protein_2322 | DUF1120 domain-containing protein | - |
| LI89_RS11990 () | 2644275..2644409 | + | 135 | WP_046050793.1 | integrase | - |
| LI89_RS11995 () | 2645047..2646453 | + | 1407 | WP_046694917.1 | hypothetical protein | - |
| LI89_RS12000 () | 2646955..2647971 | - | 1017 | WP_046694916.1 | hypothetical protein | - |
| LI89_RS12005 () | 2648394..2649554 | + | 1161 | WP_042562584.1 | IS30 family transposase ISCfr4 | Transposase |
| LI89_RS12010 () | 2649863..2651827 | + | 1965 | WP_052750730.1 | O-acetyltransferase OatA | VF |
| LI89_RS12015 () | 2651913..2652383 | - | 471 | WP_019079689.1 | tail fiber assembly protein | - |
| LI89_RS12020 () | 2652397..2653500 | - | 1104 | WP_046694915.1 | hypothetical protein | - |
| LI89_RS12025 () | 2653514..2654158 | - | 645 | WP_019079691.1 | DUF2612 domain-containing protein | - |
| LI89_RS12030 () | 2654151..2655350 | - | 1200 | WP_046694914.1 | baseplate J/gp47 family protein | - |
| LI89_RS12035 () | 2655350..2655700 | - | 351 | WP_025378609.1 | hypothetical protein | - |
| LI89_RS12040 () | 2655773..2656450 | - | 678 | WP_046694913.1 | hypothetical protein | - |
| LI89_RS12045 () | 2656458..2657351 | - | 894 | WP_046694912.1 | hypothetical protein | - |
| LI89_RS12050 () | 2657344..2657634 | - | 291 | WP_046694911.1 | hypothetical protein | - |
| LI89_RS12055 () | 2657634..2658302 | - | 669 | WP_019079697.1 | hypothetical protein | - |
| LI89_RS12060 () | 2658302..2659966 | - | 1665 | WP_046694910.1 | glycoside hydrolase family 104 protein | - |
| LI89_RS12065 () | 2660084..2660380 | - | 297 | WP_102895904.1 | hypothetical protein | - |
| LI89_RS12070 () | 2660370..2660948 | - | 579 | WP_046694908.1 | hypothetical protein | - |
| LI89_RS12075 () | 2661211..2661600 | - | 390 | WP_019079702.1 | hypothetical protein | - |
| LI89_RS12080 () | 2661603..2662007 | - | 405 | WP_019079703.1 | hypothetical protein | - |
| LI89_RS12085 () | 2662014..2662484 | - | 471 | Protein_2342 | hypothetical protein | - |
| LI89_RS12090 () | 2662496..2663080 | + | 585 | WP_020424089.1 | hypothetical protein ; Integrase | Integrase |
| - () | 2663151..2663275 | + | 125 | - | - | Antitoxin Detail |
| - () | 2663159..2663253 | - | 95 | - | - | Toxin Detail |
| LI89_RS12095 () | 2663427..2663768 | - | 342 | WP_005170437.1 | YebY family protein | - |
| LI89_RS12100 () | 2663865..2664749 | - | 885 | WP_046694907.1 | copper homeostasis membrane protein CopD | - |
| LI89_RS12105 () | 2664751..2665137 | - | 387 | WP_005170441.1 | CopC domain-containing protein YobA | - |
| LI89_RS12110 () | 2665528..2666037 | - | 510 | WP_005170444.1 | non-heme ferritin | - |
| LI89_RS12115 () | 2666421..2666654 | + | 234 | WP_046694906.1 | DNA polymerase III subunit theta | - |
| LI89_RS12120 () | 2666703..2667659 | - | 957 | WP_019079708.1 | prolyl aminopeptidase | - |
| LI89_RS12125 () | 2668170..2668832 | + | 663 | WP_005170462.1 | exodeoxyribonuclease X | - |
| LI89_RS12130 () | 2668844..2670898 | - | 2055 | WP_046694905.1 | prolyl oligopeptidase family serine peptidase | - |
| LI89_RS12135 () | 2671088..2671444 | - | 357 | WP_046694904.1 | protein YebF | - |
| LI89_RS12140 () | 2671546..2671857 | - | 312 | WP_046050789.1 | N(4)-acetylcytidine aminohydrolase | - |
| LI89_RS12145 () | 2671897..2672217 | - | 321 | WP_019083358.1 | YebG family protein | - |
| LI89_RS12150 () | 2672313..2673695 | - | 1383 | WP_005163615.1 | ATP-dependent RNA helicase DbpA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|