MGE detailed information
MGE type: Prophage MGE length: 93450 bp
Accession: NZ_CP009455 Location: 3241021..3334470 Organism: Pseudomonas cremoricolorata strain ND07 Replicon: chromosome
Accession: NZ_CP009455 Location: 3241021..3334470 Organism: Pseudomonas cremoricolorata strain ND07 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LK03_RS14525 () | 3236776..3237261 | - | 486 | WP_038413060.1 | flavin reductase family protein | - |
| LK03_RS14530 () | 3237578..3238990 | + | 1413 | WP_038413061.1 | cytosine permease | - |
| LK03_RS14535 () | 3239060..3240685 | - | 1626 | WP_038413062.1 | methyl-accepting chemotaxis protein | - |
| LK03_RS14540 () | 3241021..3242040 | + | 1020 | WP_038413063.1 | protease SohB | - |
| LK03_RS14550 () | 3242404..3243381 | + | 978 | WP_038413064.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LK03_RS14555 () | 3243378..3243623 | - | 246 | WP_038413065.1 | hypothetical protein | - |
| LK03_RS14560 () | 3243663..3243890 | - | 228 | WP_038412802.1 | hypothetical protein | - |
| LK03_RS14565 () | 3243942..3244142 | - | 201 | WP_038413066.1 | hypothetical protein | - |
| LK03_RS14570 () | 3244139..3244531 | - | 393 | WP_038413067.1 | DUF2591 family protein | - |
| LK03_RS14575 () | 3245021..3245248 | - | 228 | WP_038413069.1 | hypothetical protein | - |
| LK03_RS14580 () | 3245245..3246045 | - | 801 | WP_038414734.1 | hypothetical protein | - |
| LK03_RS14585 () | 3246094..3246879 | - | 786 | WP_038413071.1 | hypothetical protein | - |
| LK03_RS21990 () | 3246888..3247421 | - | 534 | WP_081951606.1 | DNA cytosine methyltransferase | - |
| LK03_RS14590 () | 3247555..3248268 | - | 714 | WP_038413072.1 | hypothetical protein | - |
| LK03_RS14595 () | 3248327..3248686 | - | 360 | WP_038413073.1 | hypothetical protein | - |
| LK03_RS14600 () | 3248661..3249026 | - | 366 | WP_038413074.1 | hypothetical protein | - |
| LK03_RS14605 () | 3249108..3249296 | - | 189 | WP_038413075.1 | hypothetical protein | - |
| LK03_RS14610 () | 3249305..3249799 | - | 495 | WP_038413076.1 | single-stranded DNA-binding protein | - |
| LK03_RS14615 () | 3249809..3250372 | - | 564 | WP_038413077.1 | siphovirus Gp157 family protein | - |
| LK03_RS14620 () | 3250369..3251100 | - | 732 | WP_038413078.1 | hypothetical protein | - |
| LK03_RS22320 () | 3251260..3251436 | - | 177 | WP_038413079.1 | hypothetical protein | - |
| LK03_RS14630 () | 3251433..3251801 | - | 369 | WP_038413080.1 | hypothetical protein | - |
| LK03_RS14635 () | 3251798..3251992 | - | 195 | WP_038413081.1 | hypothetical protein | - |
| LK03_RS14640 () | 3251989..3252408 | - | 420 | WP_038413082.1 | hypothetical protein | - |
| LK03_RS14645 () | 3252429..3252650 | - | 222 | WP_038413083.1 | DUF551 domain-containing protein | - |
| LK03_RS14650 () | 3252647..3252907 | - | 261 | WP_156109537.1 | hypothetical protein | - |
| LK03_RS14655 () | 3253476..3253709 | - | 234 | WP_038413085.1 | hypothetical protein | - |
| LK03_RS14660 () | 3253768..3253959 | - | 192 | WP_038413086.1 | hypothetical protein | - |
| LK03_RS14665 () | 3254322..3254876 | - | 555 | WP_156109538.1 | hypothetical protein | - |
| LK03_RS14670 () | 3254851..3255195 | - | 345 | WP_038413088.1 | hypothetical protein | - |
| LK03_RS14675 () | 3255231..3256034 | - | 804 | WP_038413089.1 | helix-turn-helix domain-containing protein | - |
| LK03_RS14680 () | 3256149..3256346 | + | 198 | WP_038413090.1 | helix-turn-helix domain-containing protein | - |
| LK03_RS14685 () | 3256377..3256580 | + | 204 | WP_038413091.1 | hypothetical protein | - |
| LK03_RS22200 () | 3256813..3256974 | + | 162 | WP_156109539.1 | hypothetical protein | - |
| LK03_RS14695 () | 3256967..3257164 | - | 198 | WP_038413093.1 | hypothetical protein | - |
| LK03_RS14700 () | 3257322..3258137 | + | 816 | WP_049870495.1 | Rha family transcriptional regulator | - |
| LK03_RS14705 () | 3258134..3258313 | + | 180 | WP_038413094.1 | hypothetical protein | - |
| LK03_RS14710 () | 3258310..3259041 | + | 732 | WP_038413095.1 | helix-turn-helix domain-containing protein | - |
| LK03_RS14715 () | 3259038..3259775 | + | 738 | WP_038413096.1 | Replication protein P | - |
| LK03_RS14720 () | 3259775..3259969 | + | 195 | WP_038413097.1 | hypothetical protein | - |
| LK03_RS14725 () | 3259969..3260226 | + | 258 | WP_038413098.1 | hypothetical protein | - |
| LK03_RS14730 () | 3260351..3260638 | + | 288 | WP_038413099.1 | SIMPL domain-containing protein | - |
| LK03_RS14735 () | 3260631..3261101 | + | 471 | WP_038413100.1 | hypothetical protein | - |
| LK03_RS14740 () | 3261098..3261397 | + | 300 | WP_038413101.1 | hypothetical protein | - |
| LK03_RS14750 () | 3261600..3262199 | + | 600 | WP_038413102.1 | recombination protein NinG | - |
| LK03_RS14755 () | 3262196..3262786 | + | 591 | WP_038413103.1 | hypothetical protein | - |
| LK03_RS14760 () | 3262918..3263175 | + | 258 | WP_156109540.1 | hypothetical protein | - |
| LK03_RS14765 () | 3263213..3263626 | + | 414 | WP_038413105.1 | hypothetical protein | - |
| LK03_RS14770 () | 3263619..3263990 | + | 372 | WP_038413106.1 | phage holin family protein | - |
| LK03_RS14775 () | 3264037..3264561 | + | 525 | WP_038413107.1 | hypothetical protein | - |
| LK03_RS14780 () | 3264564..3266051 | + | 1488 | WP_038413108.1 | terminase | - |
| LK03_RS14785 () | 3266059..3267510 | + | 1452 | WP_038413109.1 | DUF4055 domain-containing protein | - |
| LK03_RS14790 () | 3267500..3268543 | + | 1044 | WP_038413110.1 | head morphogenesis protein | - |
| LK03_RS14795 () | 3268612..3269319 | + | 708 | WP_038413111.1 | hypothetical protein | - |
| LK03_RS14800 () | 3269323..3270354 | + | 1032 | WP_038413112.1 | hypothetical protein | - |
| LK03_RS21595 () | 3270379..3270804 | + | 426 | WP_049870497.1 | hypothetical protein | - |
| LK03_RS14810 () | 3270844..3271236 | + | 393 | WP_038413113.1 | hypothetical protein | - |
| LK03_RS14815 () | 3271240..3271620 | + | 381 | WP_038413114.1 | hypothetical protein | - |
| LK03_RS14820 () | 3271623..3272183 | + | 561 | WP_038413115.1 | hypothetical protein | - |
| LK03_RS14825 () | 3272180..3272587 | + | 408 | WP_038413116.1 | electron transfer flavoprotein subunit beta | - |
| LK03_RS14830 () | 3272650..3273819 | + | 1170 | WP_038413117.1 | Fructan beta-fructosidase | VF |
| LK03_RS14835 () | 3273878..3274321 | + | 444 | WP_038413118.1 | hypothetical protein | - |
| LK03_RS14840 () | 3274429..3274686 | + | 258 | WP_038414738.1 | hypothetical protein | - |
| LK03_RS14845 () | 3274738..3275058 | + | 321 | WP_038413119.1 | superinfection immunity protein | - |
| LK03_RS14850 () | 3275499..3278303 | + | 2805 | WP_038414739.1 | phage tail length tape measure family protein | - |
| LK03_RS14855 () | 3278400..3278579 | + | 180 | WP_038413120.1 | hypothetical protein | - |
| LK03_RS14860 () | 3278576..3278833 | - | 258 | WP_038413121.1 | hypothetical protein | - |
| LK03_RS14865 () | 3278939..3279409 | + | 471 | WP_038413122.1 | hypothetical protein | - |
| LK03_RS14870 () | 3279406..3279900 | + | 495 | WP_038413123.1 | DUF1833 family protein | - |
| LK03_RS14875 () | 3279903..3280301 | + | 399 | WP_038413124.1 | hypothetical protein | - |
| LK03_RS14880 () | 3280276..3283338 | + | 3063 | WP_038413125.1 | hypothetical protein | - |
| LK03_RS14885 () | 3283396..3285237 | + | 1842 | WP_038413126.1 | SGNH/GDSL hydrolase family protein | - |
| LK03_RS14890 () | 3285248..3285988 | + | 741 | WP_038413127.1 | hypothetical protein | - |
| LK03_RS14895 () | 3286093..3286632 | + | 540 | WP_038413128.1 | glycoside hydrolase family 104 protein | - |
| LK03_RS14900 () | 3286647..3287162 | + | 516 | WP_156109571.1 | DUF2514 family protein | - |
| LK03_RS14905 () | 3287223..3287519 | + | 297 | WP_038413129.1 | hypothetical protein | - |
| LK03_RS14910 () | 3287516..3287713 | + | 198 | Protein_2937 | hypothetical protein | - |
| LK03_RS14915 () | 3288263..3289312 | - | 1050 | WP_038413130.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LK03_RS14920 () | 3289314..3289559 | - | 246 | WP_038413131.1 | DUF4224 domain-containing protein | - |
| LK03_RS14925 () | 3289585..3290082 | - | 498 | WP_038413133.1 | hypothetical protein | - |
| LK03_RS14930 () | 3290134..3290334 | - | 201 | WP_038413134.1 | hypothetical protein | - |
| LK03_RS14935 () | 3290331..3290729 | - | 399 | WP_038412804.1 | DUF2591 family protein | - |
| LK03_RS14945 () | 3291226..3291522 | - | 297 | WP_038412806.1 | hypothetical protein | - |
| LK03_RS14950 () | 3291519..3292166 | - | 648 | WP_038412807.1 | hypothetical protein | - |
| LK03_RS14960 () | 3292946..3293308 | - | 363 | Protein_2945 | DUF4406 domain-containing protein | - |
| LK03_RS14965 () | 3293317..3294804 | - | 1488 | WP_038413135.1 | DNA cytosine methyltransferase | - |
| LK03_RS22205 () | 3294882..3295754 | + | 873 | WP_167334498.1 | hypothetical protein | - |
| LK03_RS22210 () | 3295926..3296245 | + | 320 | Protein_2948 | hypothetical protein | - |
| LK03_RS14975 () | 3296267..3296650 | - | 384 | WP_038413137.1 | hypothetical protein | - |
| LK03_RS14985 () | 3296966..3297385 | - | 420 | WP_038413139.1 | hypothetical protein | - |
| LK03_RS14990 () | 3297683..3298498 | - | 816 | WP_038413140.1 | DUF2303 family protein | - |
| LK03_RS14995 () | 3298529..3298876 | - | 348 | WP_038413141.1 | hypothetical protein | - |
| LK03_RS15000 () | 3298965..3299423 | - | 459 | WP_038413142.1 | hypothetical protein | - |
| LK03_RS15005 () | 3299420..3299680 | - | 261 | WP_038413143.1 | hypothetical protein | - |
| LK03_RS15010 () | 3299698..3300081 | - | 384 | WP_038413144.1 | Transcriptional regulatory protein DesR | VF |
| LK03_RS15015 () | 3300357..3300668 | - | 312 | WP_038413145.1 | hypothetical protein | - |
| LK03_RS15020 () | 3300732..3300953 | - | 222 | WP_038413146.1 | hypothetical protein | - |
| LK03_RS15025 () | 3301021..3301200 | - | 180 | WP_038413147.1 | carbon storage regulator CsrA | - |
| LK03_RS22325 () | 3301260..3301436 | - | 177 | WP_167334499.1 | hypothetical protein | - |
| LK03_RS15030 () | 3302048..3302299 | - | 252 | WP_038413148.1 | DUF1654 domain-containing protein | - |
| LK03_RS15035 () | 3302467..3303198 | - | 732 | WP_081951607.1 | helix-turn-helix domain-containing protein | - |
| LK03_RS15040 () | 3303229..3303459 | + | 231 | WP_038413149.1 | helix-turn-helix domain-containing protein | - |
| LK03_RS15045 () | 3303667..3304347 | + | 681 | WP_038414744.1 | phage regulatory protein/antirepressor Ant | - |
| LK03_RS15050 () | 3304349..3305320 | + | 972 | WP_038413150.1 | hypothetical protein | - |
| LK03_RS15055 () | 3305307..3306086 | + | 780 | WP_038413151.1 | hypothetical protein | - |
| LK03_RS15060 () | 3306083..3306379 | + | 297 | WP_038413152.1 | DUF1364 domain-containing protein | - |
| LK03_RS15065 () | 3306376..3306801 | + | 426 | WP_038413153.1 | VRR-NUC domain-containing protein | - |
| LK03_RS15070 () | 3306798..3308096 | + | 1299 | WP_038413154.1 | Prophage integrase IntA ; Integrase | Integrase |
| LK03_RS15075 () | 3308093..3308341 | + | 249 | WP_038413155.1 | hypothetical protein | - |
| LK03_RS15080 () | 3308338..3308655 | + | 318 | WP_038413156.1 | hypothetical protein | - |
| LK03_RS15085 () | 3308667..3309008 | + | 342 | WP_038413157.1 | hypothetical protein | - |
| LK03_RS15090 () | 3309135..3309560 | - | 426 | WP_038413158.1 | transcriptional regulator | Antitoxin Detail |
| LK03_RS15095 () | 3309612..3309791 | - | 180 | WP_038413159.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LK03_RS15100 () | 3309887..3310213 | + | 327 | WP_038413161.1 | hypothetical protein | - |
| LK03_RS15105 () | 3310210..3310539 | + | 330 | WP_038413162.1 | hypothetical protein | - |
| LK03_RS21995 () | 3310543..3310947 | + | 405 | WP_081951608.1 | HNH endonuclease | - |
| LK03_RS15115 () | 3311048..3311527 | + | 480 | WP_038413164.1 | phage terminase small subunit P27 family | - |
| LK03_RS15120 () | 3311527..3313254 | + | 1728 | WP_038413165.1 | terminase large subunit | - |
| LK03_RS22330 () | 3313254..3313418 | + | 165 | WP_167334500.1 | hypothetical protein | - |
| LK03_RS15125 () | 3313411..3314721 | + | 1311 | WP_038413166.1 | phage portal protein | - |
| LK03_RS15130 () | 3314725..3315588 | + | 864 | WP_038413168.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| LK03_RS15135 () | 3315585..3316775 | + | 1191 | WP_038413169.1 | phage major capsid protein | - |
| LK03_RS15140 () | 3316822..3317331 | + | 510 | WP_038413170.1 | hypothetical protein | - |
| LK03_RS15145 () | 3317334..3317810 | + | 477 | WP_038413171.1 | phage gp6-like head-tail connector protein | - |
| LK03_RS15150 () | 3317853..3318254 | + | 402 | WP_081951609.1 | head-tail adaptor protein | - |
| LK03_RS15155 () | 3318244..3318753 | + | 510 | WP_038413173.1 | hypothetical protein | - |
| LK03_RS15160 () | 3318883..3319332 | + | 450 | WP_049870615.1 | hypothetical protein | - |
| LK03_RS15165 () | 3319343..3319546 | + | 204 | WP_038413175.1 | DUF2635 domain-containing protein | - |
| LK03_RS15170 () | 3319543..3321027 | + | 1485 | WP_038413176.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| LK03_RS15175 () | 3321082..3321429 | + | 348 | WP_038413177.1 | phage tail tube protein | - |
| LK03_RS15180 () | 3321420..3321767 | + | 348 | WP_049870498.1 | phage tail assembly protein | - |
| LK03_RS15185 () | 3321849..3323762 | + | 1914 | WP_038413178.1 | phage tail tape measure protein | - |
| LK03_RS15190 () | 3323759..3325018 | + | 1260 | WP_038413179.1 | DNA circularization N-terminal domain-containing protein | - |
| LK03_RS15195 () | 3325022..3326131 | + | 1110 | WP_038413180.1 | baseplate protein | - |
| LK03_RS15200 () | 3326137..3326640 | + | 504 | WP_038413185.1 | phage baseplate assembly protein V | - |
| LK03_RS15205 () | 3326637..3327023 | + | 387 | WP_038413187.1 | phage GP46 family protein | - |
| LK03_RS15210 () | 3327013..3328056 | + | 1044 | WP_038413189.1 | baseplate J/gp47 family protein | - |
| LK03_RS15215 () | 3328047..3328688 | + | 642 | WP_038413191.1 | DUF2313 domain-containing protein | - |
| LK03_RS21600 () | 3328691..3329602 | + | 912 | WP_049870499.1 | hypothetical protein | - |
| LK03_RS21605 () | 3329823..3331511 | + | 1689 | WP_167334501.1 | SGNH/GDSL hydrolase family protein | - |
| LK03_RS15230 () | 3331526..3332275 | + | 750 | WP_038413193.1 | hypothetical protein | - |
| LK03_RS22000 () | 3332345..3333139 | - | 795 | WP_156109541.1 | Virginiamycin A acetyltransferase | VF |
| LK03_RS15240 () | 3333434..3333973 | + | 540 | WP_038413195.1 | glycoside hydrolase family 104 protein | - |
| LK03_RS15245 () | 3333970..3334470 | + | 501 | WP_038413197.1 | DUF2514 domain-containing protein | - |
| LK03_RS15255 () | 3334936..3335145 | + | 210 | WP_038413200.1 | hypothetical protein | - |
| LK03_RS15260 () | 3335251..3335547 | + | 297 | WP_038413202.1 | hypothetical protein | - |
| LK03_RS22410 () | 3335544..3335897 | + | 354 | WP_205621216.1 | hypothetical protein | - |
| LK03_RS22415 () | 3336070..3336534 | - | 465 | WP_205621217.1 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| LK03_RS15270 () | 3337313..3337816 | + | 504 | WP_028696072.1 | sigma-70 family RNA polymerase sigma factor | - |
| LK03_RS15275 () | 3337813..3338778 | + | 966 | WP_038413204.1 | FecR family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|