MGE detailed information
MGE type: Prophage MGE length: 44274 bp
Accession: NZ_CP009452 Location: 2385654..2429927 Organism: Sphingopyxis sp. 113P3 Replicon: chromosome
Accession: NZ_CP009452 Location: 2385654..2429927 Organism: Sphingopyxis sp. 113P3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LH20_RS11660 () | 2381442..2382071 | - | 630 | WP_053554350.1 | dTMP kinase | - |
| LH20_RS11665 () | 2382065..2383288 | - | 1224 | WP_053554351.1 | D-alanyl-D-alanine carboxypeptidase | - |
| LH20_RS11670 () | 2383288..2384256 | - | 969 | WP_053554352.1 | septal ring lytic transglycosylase RlpA family protein | - |
| LH20_RS11675 () | 2384240..2385307 | - | 1068 | WP_079638333.1 | lytic murein transglycosylase | - |
| LH20_RS11685 () | 2385654..2386859 | - | 1206 | WP_083455375.1 | ISL3 family transposase ISLpn11 | Transposase |
| LH20_RS11690 () | 2387107..2388132 | - | 1026 | WP_053554139.1 | IS110 family transposase ISMno14 | Transposase |
| LH20_RS11695 () | 2388252..2388878 | - | 627 | WP_200905368.1 | IS481 family transposase ISHne2 | Transposase |
| LH20_RS11700 () | 2388948..2389175 | - | 228 | Protein_2304 | ISL3 family transposase ISMdi2 | Transposase |
| LH20_RS11715 () | 2390449..2391819 | - | 1371 | Protein_2306 | ISL3 family transposase ISAzs13 | Transposase |
| LH20_RS11720 () | 2392099..2393130 | + | 1032 | Protein_2307 | IS21 family transposase ISBj11 | Transposase |
| LH20_RS11725 () | 2393288..2394529 | + | 1242 | WP_053554353.1 | IS21 family transposase ISBcen28 | Transposase |
| LH20_RS11730 () | 2394526..2395371 | + | 846 | WP_053554354.1 | IS21 family transposase ISRel3 | Transposase |
| LH20_RS23525 () | 2395397..2395543 | - | 147 | WP_158501131.1 | hypothetical protein | - |
| LH20_RS22940 () | 2395666..2396684 | + | 1019 | Protein_2311 | IS3 family transposase ISSsp2 | Transposase |
| LH20_RS11745 () | 2396898..2397908 | - | 1011 | Protein_2312 | IS110 family transposase ISMex12 | Transposase |
| LH20_RS11750 () | 2398091..2399614 | + | 1524 | WP_083455225.1 | IS21 family transposase ISRel16 | Transposase |
| LH20_RS11755 () | 2399625..2400365 | + | 741 | WP_053552564.1 | IS21 family transposase ISRel16 | Transposase |
| LH20_RS11760 () | 2400477..2400776 | - | 300 | Protein_2315 | IS110 family transposase ISMex12 | Transposase |
| LH20_RS11765 () | 2400930..2401280 | + | 351 | Protein_2316 | IS3 family transposase ISPko4 | Transposase |
| LH20_RS11775 () | 2401604..2402635 | - | 1032 | WP_053553130.1 | IS110 family transposase ISPko7 | Transposase |
| LH20_RS11780 () | 2402847..2406194 | - | 3348 | WP_053554356.1 | DUF499 domain-containing protein | - |
| LH20_RS11785 () | 2406210..2409035 | - | 2826 | WP_053554357.1 | DUF1156 domain-containing protein | - |
| LH20_RS11790 () | 2409019..2413248 | - | 4230 | WP_053554358.1 | ATP-binding protein | - |
| LH20_RS11795 () | 2413245..2416829 | - | 3585 | WP_053554359.1 | DUF3883 domain-containing protein | - |
| LH20_RS11800 () | 2416831..2417712 | - | 882 | WP_053554360.1 | WYL domain-containing protein | - |
| LH20_RS11805 () | 2417884..2418099 | - | 216 | WP_053556261.1 | helix-turn-helix domain-containing protein | - |
| LH20_RS11810 () | 2418646..2419269 | + | 624 | WP_053556262.1 | plasmid pRiA4b ORF-3 family protein | - |
| LH20_RS11815 () | 2419270..2421471 | - | 2202 | WP_053554361.1 | ATP-dependent RecD-like DNA helicase | - |
| LH20_RS11820 () | 2421468..2421905 | - | 438 | WP_053554362.1 | hypothetical protein | - |
| LH20_RS11825 () | 2421914..2422558 | - | 645 | WP_053554363.1 | hypothetical protein | - |
| LH20_RS11830 () | 2422609..2422905 | - | 297 | WP_200905492.1 | hypothetical protein | - |
| LH20_RS11835 () | 2422989..2424311 | - | 1323 | WP_053554365.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| LH20_RS11840 () | 2424308..2424721 | - | 414 | WP_200905493.1 | DUF2924 domain-containing protein | - |
| LH20_RS23530 () | 2425255..2425752 | + | 498 | WP_158501132.1 | hypothetical protein | - |
| LH20_RS11845 () | 2426476..2426958 | + | 483 | WP_053554366.1 | hypothetical protein | - |
| LH20_RS11850 () | 2427209..2427490 | - | 282 | WP_053554367.1 | putative addiction module antidote protein | Antitoxin Detail |
| LH20_RS11855 () | 2427493..2427789 | - | 297 | WP_053554368.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LH20_RS22945 () | 2427788..2428102 | + | 315 | WP_158501133.1 | HNH endonuclease | - |
| LH20_RS23535 () | 2428209..2429927 | + | 1719 | WP_158501134.1 | ParB N-terminal domain-containing protein | - |
| LH20_RS11865 () | 2429964..2430380 | + | 417 | WP_053553102.1 | IS66 family insertion sequence hypothetical protein | - |
| LH20_RS11870 () | 2430377..2430724 | + | 348 | WP_053554370.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| LH20_RS11875 () | 2430788..2432416 | + | 1629 | WP_053554371.1 | IS66 family transposase | - |
| LH20_RS11880 () | 2432416..2432709 | + | 294 | WP_053554372.1 | hypothetical protein | - |
| LH20_RS11885 () | 2432690..2433205 | - | 516 | WP_144423571.1 | plasmid mobilization relaxosome protein MobC | - |
| LH20_RS22955 () | 2433384..2433809 | - | 426 | WP_083455390.1 | GFA family protein | - |
| LH20_RS11890 () | 2433852..2434520 | - | 669 | WP_053554373.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|