MGE detailed information
MGE type: Prophage MGE length: 43617 bp
Accession: NZ_CP009451 Location: 4592854..4636470 Organism: Cedecea neteri strain SSMD04 Replicon: chromosome
Accession: NZ_CP009451 Location: 4592854..4636470 Organism: Cedecea neteri strain SSMD04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JT31_RS21235 () | 4588118..4588759 | + | 642 | WP_038481851.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JT31_RS23810 () | 4588833..4590196 | + | 1364 | WP_144244011.1 | IS3 family transposase | - |
| JT31_RS21250 () | 4590280..4591458 | - | 1179 | WP_038481854.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JT31_RS21255 () | 4591595..4591945 | + | 351 | WP_038481857.1 | YebG family protein | - |
| JT31_RS21260 () | 4592065..4592742 | + | 678 | WP_038481860.1 | tellurite resistance TerB family protein | - |
| JT31_RS21265 () | 4592866..4594923 | + | 2058 | WP_038483433.1 | oligopeptidase B | - |
| JT31_RS21270 () | 4594920..4595591 | - | 672 | WP_038481862.1 | exodeoxyribonuclease X | - |
| JT31_RS21275 () | 4595735..4595965 | - | 231 | WP_167549833.1 | DNA polymerase III subunit theta | - |
| JT31_RS21280 () | 4596107..4596481 | + | 375 | WP_038481868.1 | CopC domain-containing protein YobA | - |
| JT31_RS21285 () | 4596487..4597362 | + | 876 | WP_038481871.1 | copper homeostasis membrane protein CopD | - |
| JT31_RS21290 () | 4597391..4597735 | + | 345 | WP_038481874.1 | YebY family protein | - |
| - () | 4597822..4597989 | - | 168 | - | - | Antitoxin Detail |
| - () | 4597884..4597987 | + | 104 | - | - | Toxin Detail |
| JT31_RS21295 () | 4598121..4599194 | - | 1074 | WP_038481877.1 | hypothetical protein ; Integrase | Integrase |
| JT31_RS21300 () | 4599169..4599459 | - | 291 | WP_052049036.1 | excisionase | - |
| JT31_RS21305 () | 4599521..4599724 | - | 204 | WP_038481880.1 | DUF1187 family protein | - |
| JT31_RS21310 () | 4599712..4600056 | - | 345 | WP_052049037.1 | Rrf2 family transcriptional regulator | - |
| JT31_RS22810 () | 4600060..4602246 | - | 2187 | WP_052049038.1 | hypothetical protein | - |
| JT31_RS21325 () | 4602452..4602760 | - | 309 | WP_038481886.1 | hypothetical protein | - |
| JT31_RS23565 () | 4603334..4603708 | - | 375 | WP_052049039.1 | hypothetical protein | - |
| JT31_RS21335 () | 4603805..4604059 | + | 255 | WP_052049040.1 | helix-turn-helix domain-containing protein | - |
| JT31_RS21340 () | 4604063..4604488 | + | 426 | WP_052049041.1 | hypothetical protein | - |
| JT31_RS21345 () | 4604505..4604756 | + | 252 | WP_038481889.1 | hypothetical protein | - |
| JT31_RS21350 () | 4604770..4605009 | + | 240 | WP_038481892.1 | DUF4222 domain-containing protein | - |
| JT31_RS22820 () | 4605029..4606027 | + | 999 | WP_052049042.1 | conserved phage C-terminal domain-containing protein | - |
| JT31_RS21360 () | 4606040..4606435 | + | 396 | WP_038481895.1 | winged helix-turn-helix domain-containing protein | - |
| JT31_RS21365 () | 4606428..4606670 | + | 243 | WP_038481897.1 | hypothetical protein | - |
| JT31_RS21370 () | 4606667..4606870 | + | 204 | WP_038481899.1 | hypothetical protein | - |
| JT31_RS21375 () | 4606874..4607065 | + | 192 | WP_038481902.1 | hypothetical protein | - |
| JT31_RS21380 () | 4607058..4607549 | + | 492 | WP_038481905.1 | class I SAM-dependent methyltransferase | - |
| JT31_RS21385 () | 4607542..4608099 | + | 558 | WP_038481908.1 | hypothetical protein | - |
| JT31_RS21390 () | 4608100..4608468 | + | 369 | WP_038481911.1 | HNH endonuclease | - |
| JT31_RS21395 () | 4608465..4608764 | + | 300 | WP_038481914.1 | hypothetical protein | - |
| JT31_RS22825 () | 4608761..4609222 | + | 462 | WP_052049043.1 | hypothetical protein | - |
| JT31_RS21405 () | 4609322..4609591 | + | 270 | WP_038481917.1 | hypothetical protein | - |
| JT31_RS21410 () | 4609720..4609914 | + | 195 | WP_038481920.1 | hypothetical protein | - |
| JT31_RS21415 () | 4610071..4610361 | + | 291 | WP_038481923.1 | DUF968 domain-containing protein | - |
| JT31_RS21420 () | 4610358..4610966 | + | 609 | WP_038481926.1 | hypothetical protein | - |
| JT31_RS21425 () | 4611058..4611681 | + | 624 | WP_052049044.1 | hypothetical protein | - |
| JT31_RS21430 () | 4611686..4612579 | + | 894 | WP_081948210.1 | hypothetical protein | - |
| JT31_RS21435 () | 4612530..4613144 | + | 615 | WP_038481929.1 | methyltransferase domain-containing protein | - |
| JT31_RS21440 () | 4613188..4613436 | + | 249 | WP_038481932.1 | class II holin family protein | - |
| JT31_RS21445 () | 4613439..4613969 | + | 531 | WP_038481935.1 | lysozyme | - |
| JT31_RS21450 () | 4613966..4614493 | + | 528 | WP_038481938.1 | hypothetical protein | - |
| JT31_RS21455 () | 4614601..4614819 | + | 219 | WP_038481941.1 | hypothetical protein | - |
| JT31_RS21460 () | 4614912..4615910 | + | 999 | WP_038481945.1 | terminase small subunit | - |
| JT31_RS21465 () | 4616109..4617725 | + | 1617 | WP_038481948.1 | hypothetical protein | - |
| JT31_RS21470 () | 4617727..4619202 | + | 1476 | WP_038481951.1 | DUF1073 domain-containing protein | - |
| JT31_RS21475 () | 4619273..4619806 | + | 534 | WP_038483465.1 | phage Mu F like family protein | - |
| JT31_RS21485 () | 4620265..4621536 | + | 1272 | WP_038481957.1 | DUF2213 domain-containing protein | - |
| JT31_RS21490 () | 4621548..4622051 | + | 504 | WP_038481960.1 | hypothetical protein | - |
| JT31_RS21495 () | 4622062..4623009 | + | 948 | WP_038481963.1 | DUF2184 domain-containing protein | - |
| JT31_RS21500 () | 4623052..4623435 | + | 384 | WP_038481966.1 | hypothetical protein | - |
| JT31_RS21505 () | 4623419..4623829 | + | 411 | WP_038481970.1 | DUF4054 domain-containing protein | - |
| JT31_RS21510 () | 4623826..4624329 | + | 504 | WP_038481972.1 | hypothetical protein | - |
| JT31_RS21515 () | 4624329..4624721 | + | 393 | WP_038481975.1 | hypothetical protein | - |
| JT31_RS21520 () | 4624718..4625263 | + | 546 | WP_038481978.1 | hypothetical protein | - |
| JT31_RS21525 () | 4625267..4626424 | + | 1158 | WP_038481981.1 | DUF3383 domain-containing protein | - |
| JT31_RS21530 () | 4626435..4626875 | + | 441 | WP_038481984.1 | DUF3277 family protein | - |
| JT31_RS21535 () | 4626879..4627304 | + | 426 | WP_038481986.1 | hypothetical protein | - |
| JT31_RS23905 () | 4627316..4627504 | - | 189 | WP_158399828.1 | hypothetical protein | - |
| JT31_RS21540 () | 4627482..4629491 | + | 2010 | WP_038481989.1 | lytic transglycosylase domain-containing protein | - |
| JT31_RS21545 () | 4629491..4630090 | + | 600 | WP_038481992.1 | hypothetical protein | - |
| JT31_RS21550 () | 4630092..4630397 | + | 306 | WP_038481995.1 | hypothetical protein | - |
| JT31_RS21555 () | 4630401..4631462 | + | 1062 | WP_038481998.1 | hypothetical protein | - |
| JT31_RS21560 () | 4631464..4631808 | + | 345 | WP_052049045.1 | hypothetical protein | - |
| JT31_RS21565 () | 4631864..4632604 | + | 741 | WP_038482001.1 | phage baseplate assembly protein V | - |
| JT31_RS21570 () | 4632604..4632957 | + | 354 | WP_038482004.1 | hypothetical protein | - |
| JT31_RS21575 () | 4632958..4634157 | + | 1200 | WP_038482007.1 | baseplate J/gp47 family protein | - |
| JT31_RS21580 () | 4634154..4634834 | + | 681 | WP_038482010.1 | DUF2612 domain-containing protein | - |
| JT31_RS23355 () | 4634834..4635289 | + | 456 | Protein_4228 | phage tail protein | - |
| JT31_RS21590 () | 4635639..4636055 | + | 417 | WP_038482013.1 | tail fiber assembly protein | - |
| JT31_RS21595 () | 4636027..4636467 | - | 441 | WP_038483474.1 | tail assembly chaperone | - |
| JT31_RS21600 () | 4637494..4638990 | + | 1497 | WP_038482016.1 | SulP family inorganic anion transporter | - |
| JT31_RS21605 () | 4639246..4640493 | + | 1248 | WP_038482019.1 | MFS transporter | - |
| JT31_RS21610 () | 4640508..4641041 | + | 534 | WP_200882449.1 | GNAT family N-acetyltransferase | - |
| JT31_RS21615 () | 4641059..4641250 | - | 192 | WP_038482025.1 | YebW family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|