MGE detailed information
MGE type: Prophage MGE length: 60013 bp
Accession: NZ_CP009367 Location: 1267092..1327104 Organism: Yersinia enterocolitica strain WA Replicon: chromosome
Accession: NZ_CP009367 Location: 1267092..1327104 Organism: Yersinia enterocolitica strain WA Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CH47_RS06260 () | 1262229..1263611 | + | 1383 | WP_019079712.1 | ATP-dependent RNA helicase DbpA | - |
| CH47_RS06265 () | 1263707..1264027 | + | 321 | WP_005170477.1 | YebG family protein | - |
| CH47_RS06270 () | 1264066..1264374 | + | 309 | WP_005170475.1 | N(4)-acetylcytidine aminohydrolase | - |
| CH47_RS06275 () | 1264480..1264836 | + | 357 | WP_005170472.1 | protein YebF | - |
| CH47_RS06280 () | 1265026..1267080 | + | 2055 | WP_005170468.1 | prolyl oligopeptidase family serine peptidase | - |
| CH47_RS06285 () | 1267092..1267754 | - | 663 | WP_005170462.1 | exodeoxyribonuclease X | - |
| CH47_RS06290 () | 1268068..1269072 | - | 1005 | WP_032908453.1 | IS110 family transposase IS1328 | Transposase |
| CH47_RS06295 () | 1269609..1270565 | + | 957 | WP_005170448.1 | prolyl aminopeptidase | - |
| CH47_RS06300 () | 1270615..1270848 | - | 234 | WP_004389928.1 | DNA polymerase III subunit theta | - |
| CH47_RS06305 () | 1271232..1271741 | + | 510 | WP_005170444.1 | non-heme ferritin | - |
| CH47_RS06310 () | 1272144..1272530 | + | 387 | WP_005170441.1 | CopC domain-containing protein YobA | - |
| CH47_RS06315 () | 1272532..1273416 | + | 885 | WP_005170439.1 | copper homeostasis membrane protein CopD | - |
| CH47_RS06320 () | 1273513..1273854 | + | 342 | WP_005170437.1 | YebY family protein | - |
| CH47_RS06325 () | 1274180..1275250 | - | 1071 | WP_032912738.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| CH47_RS21565 () | 1275403..1275621 | - | 219 | WP_005170435.1 | DNA-binding transcriptional regulator | - |
| CH47_RS06330 () | 1275714..1276856 | - | 1143 | WP_005170434.1 | phage late control D family protein | - |
| CH47_RS06335 () | 1276853..1277305 | - | 453 | WP_005170432.1 | phage tail protein | - |
| CH47_RS21200 () | 1277308..1279736 | - | 2429 | Protein_1160 | phage tail tape measure protein | - |
| CH47_RS06350 () | 1279729..1279851 | - | 123 | WP_005170430.1 | GpE family phage tail protein | - |
| CH47_RS06355 () | 1279884..1280171 | - | 288 | WP_005170427.1 | phage tail assembly protein | - |
| CH47_RS06360 () | 1280188..1280703 | - | 516 | WP_005170424.1 | phage major tail tube protein | - |
| CH47_RS06365 () | 1280717..1281886 | - | 1170 | WP_005170423.1 | phage tail sheath protein | - |
| CH47_RS06370 () | 1282148..1282333 | - | 186 | WP_005170420.1 | hypothetical protein | - |
| CH47_RS06375 () | 1282902..1283846 | - | 945 | WP_072075874.1 | Recombination-promoting nuclease RpnA | VF |
| CH47_RS22970 () | 1284051..1284227 | - | 177 | WP_005170412.1 | hypothetical protein | VF |
| CH47_RS06380 () | 1284694..1285308 | - | 615 | WP_032908451.1 | tail fiber assembly protein | - |
| CH47_RS06385 () | 1285308..1286436 | - | 1129 | Protein_1169 | phage tail protein | - |
| CH47_RS06390 () | 1286687..1287229 | - | 543 | WP_005170403.1 | phage tail protein I | - |
| CH47_RS06395 () | 1287222..1288130 | - | 909 | WP_005170400.1 | baseplate assembly protein | - |
| CH47_RS06400 () | 1288135..1288485 | - | 351 | WP_005170397.1 | GPW/gp25 family protein | - |
| CH47_RS06405 () | 1288710..1288853 | + | 144 | Protein_1173 | XRE family transcriptional regulator | - |
| CH47_RS06410 () | 1288970..1289290 | - | 321 | WP_005170392.1 | hypothetical protein | - |
| CH47_RS06415 () | 1289280..1289486 | - | 207 | WP_005170388.1 | host cell division inhibitor Icd-like protein | - |
| CH47_RS23080 () | 1289628..1289795 | + | 168 | WP_005170387.1 | hypothetical protein | - |
| CH47_RS06425 () | 1289867..1290127 | + | 261 | WP_005170385.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| CH47_RS06430 () | 1290134..1290412 | + | 279 | WP_005170383.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| CH47_RS21575 () | 1290455..1290532 | - | 78 | Protein_1179 | tail fiber assembly protein | - |
| CH47_RS06435 () | 1290546..1290746 | - | 201 | Protein_1180 | Recombination-promoting nuclease RpnA | VF |
| CH47_RS06440 () | 1290884..1291513 | - | 630 | WP_005170378.1 | phage baseplate assembly protein V | - |
| CH47_RS06445 () | 1291694..1292947 | + | 1254 | WP_005170376.1 | hypothetical protein | - |
| CH47_RS06450 () | 1292944..1293984 | + | 1041 | WP_005170374.1 | hypothetical protein | - |
| CH47_RS06455 () | 1294028..1294486 | - | 459 | WP_005170370.1 | phage virion morphogenesis protein | - |
| CH47_RS06460 () | 1294483..1294938 | - | 456 | WP_005170367.1 | phage tail protein | - |
| CH47_RS06465 () | 1295034..1295450 | - | 417 | WP_005170361.1 | Rz-like lysis system protein LysB | - |
| CH47_RS06470 () | 1295452..1295958 | - | 507 | WP_032908448.1 | lysozyme | - |
| CH47_RS06475 () | 1295942..1296163 | - | 222 | WP_071882656.1 | hypothetical protein | - |
| CH47_RS06480 () | 1296154..1296357 | - | 204 | WP_005170353.1 | tail protein X | - |
| CH47_RS06485 () | 1296357..1296830 | - | 474 | WP_005170349.1 | head completion/stabilization protein | - |
| CH47_RS06490 () | 1296931..1297590 | - | 660 | WP_005170347.1 | terminase endonuclease subunit | - |
| CH47_RS06495 () | 1297594..1298724 | - | 1131 | WP_005170338.1 | phage major capsid protein, P2 family | - |
| CH47_RS06500 () | 1298753..1299595 | - | 843 | WP_005170329.1 | GPO family capsid scaffolding protein | - |
| CH47_RS06505 () | 1299742..1299921 | + | 180 | Protein_1194 | helix-turn-helix domain-containing protein | - |
| CH47_RS06510 () | 1299987..1300295 | + | 309 | WP_005166743.1 | IS3 family transposase ISBrsa1 | Transposase |
| CH47_RS06515 () | 1300241..1301134 | + | 894 | Protein_1196 | IS3 family transposase ISBps2 | Transposase |
| CH47_RS06520 () | 1301165..1302760 | + | 1596 | Protein_1197 | terminase family protein | - |
| CH47_RS06525 () | 1302757..1303758 | + | 1002 | WP_005170313.1 | phage portal protein | - |
| CH47_RS06530 () | 1303815..1304336 | - | 522 | WP_005170310.1 | hypothetical protein | - |
| CH47_RS06535 () | 1304368..1304688 | - | 321 | WP_005170307.1 | hypothetical protein | - |
| CH47_RS06540 () | 1305039..1307519 | - | 2481 | WP_005170304.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| CH47_RS06545 () | 1307794..1307949 | - | 156 | WP_005170303.1 | hypothetical protein | - |
| CH47_RS06555 () | 1308257..1309296 | + | 1040 | WP_102990426.1 | IS3 family transposase ISYen3 | Transposase |
| CH47_RS06570 () | 1310132..1310527 | + | 396 | WP_032908439.1 | exported phage-related protein | - |
| CH47_RS06575 () | 1310527..1310823 | + | 297 | WP_005166766.1 | phage holin family protein | - |
| CH47_RS06580 () | 1310810..1311352 | + | 543 | WP_005166765.1 | glycoside hydrolase family 108 protein | - |
| CH47_RS06585 () | 1311398..1311847 | + | 450 | WP_032902418.1 | lysis protein | - |
| CH47_RS21585 () | 1311961..1312152 | + | 192 | WP_005166760.1 | DUF4222 domain-containing protein | - |
| CH47_RS22975 () | 1312335..1312894 | + | 560 | Protein_1209 | KilA-N domain-containing protein | - |
| CH47_RS06595 () | 1313201..1313737 | + | 537 | WP_005166773.1 | Attachment invasion locus protein | VF |
| CH47_RS06600 () | 1313782..1315085 | - | 1304 | Protein_1211 | IS3 family transposase IS1664 | Transposase |
| CH47_RS06610 () | 1315116..1316009 | - | 894 | Protein_1212 | IS3 family transposase ISBps2 | Transposase |
| CH47_RS06615 () | 1315955..1316263 | - | 309 | WP_005166743.1 | IS3 family transposase ISBrsa1 | Transposase |
| CH47_RS21595 () | 1316319..1316459 | + | 141 | Protein_1214 | ogr/Delta-like zinc finger family protein | - |
| CH47_RS06635 () | 1317153..1317701 | - | 549 | WP_005170287.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| CH47_RS06640 () | 1317760..1319592 | - | 1833 | WP_005170283.1 | excinuclease ABC subunit UvrC | - |
| CH47_RS06645 () | 1319585..1320241 | - | 657 | WP_005160181.1 | Response regulator UvrY | VF |
| CH47_RS06650 () | 1320934..1321158 | + | 225 | WP_005160184.1 | DUF2594 family protein | - |
| CH47_RS06655 () | 1321270..1321608 | + | 339 | WP_005170280.1 | GlpM family protein | - |
| CH47_RS06660 () | 1321639..1321893 | - | 255 | WP_005170278.1 | hypothetical protein | - |
| CH47_RS06665 () | 1322766..1323185 | - | 420 | WP_005170276.1 | helix-turn-helix domain-containing protein | - |
| CH47_RS06670 () | 1323516..1323698 | + | 183 | WP_005170274.1 | hypothetical protein | - |
| CH47_RS06675 () | 1324124..1324543 | + | 420 | WP_005170273.1 | antitermination protein Q | - |
| CH47_RS06680 () | 1324673..1325865 | - | 1193 | Protein_1224 | IS4 family transposase ISSfl1 | Transposase |
| CH47_RS06685 () | 1326041..1326217 | - | 177 | WP_005170265.1 | GhoT/OrtT family toxin | - |
| CH47_RS06690 () | 1326444..1326620 | + | 177 | WP_005161370.1 | phage holin family protein | - |
| CH47_RS06695 () | 1326622..1327104 | + | 483 | WP_005170262.1 | lysozyme | - |
| CH47_RS06700 () | 1327477..1328361 | + | 885 | WP_005170261.1 | triacylglycerol lipase | - |
| CH47_RS06705 () | 1329155..1330027 | + | 873 | WP_005170259.1 | 23S rRNA pseudouridine(2604) synthase RluF | - |
| CH47_RS06710 () | 1330126..1330674 | - | 549 | Protein_1230 | hypothetical protein | - |
| CH47_RS06715 () | 1331099..1331293 | - | 195 | WP_005170255.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|