MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 71829 bp
Accession: NZ_CP009364 Location: 3926414..3998242 Organism: Yersinia frederiksenii Y225 Replicon: chromosome
Accession: NZ_CP009364 Location: 3926414..3998242 Organism: Yersinia frederiksenii Y225 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AW19_RS18165 () | 3922058..3923095 | - | 1038 | WP_038637019.1 | hemin-degrading factor | - |
| AW19_RS18170 () | 3923207..3925237 | - | 2031 | WP_038637018.1 | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor | - |
| AW19_RS18175 () | 3925389..3925634 | - | 246 | WP_038637016.1 | hemin uptake protein HemP | - |
| AW19_RS22370 () | 3925986..3926069 | + | 84 | Protein_3468 | transposase | - |
| AW19_RS18180 () | 3926530..3927405 | + | 876 | WP_038630888.1 | Tyrosine-protein kinase CpsD | VF |
| AW19_RS18185 () | 3927402..3928745 | + | 1344 | WP_042562536.1 | replicative DNA helicase | - |
| AW19_RS18190 () | 3928735..3930357 | + | 1623 | WP_042562537.1 | ParB family protein | - |
| AW19_RS18195 () | 3930350..3930589 | + | 240 | WP_042562538.1 | TraR/DksA family transcriptional regulator | - |
| AW19_RS18200 () | 3930582..3931151 | + | 570 | WP_042562539.1 | DUF2857 domain-containing protein | - |
| AW19_RS18205 () | 3931151..3932410 | + | 1260 | WP_042562540.1 | helix-turn-helix domain-containing protein | - |
| AW19_RS18210 () | 3932468..3933781 | - | 1314 | WP_042562541.1 | hypothetical protein | - |
| AW19_RS21710 () | 3934020..3935201 | - | 1182 | WP_144404289.1 | HNH endonuclease | - |
| AW19_RS18220 () | 3935471..3936748 | - | 1278 | WP_042562542.1 | SH3 domain-containing protein | - |
| AW19_RS22070 () | 3936828..3936926 | - | 99 | WP_071841749.1 | DUF4113 domain-containing protein | - |
| AW19_RS18230 () | 3937093..3938267 | + | 1175 | WP_144242873.1 | IS3 family transposase ISSlo2 | Transposase |
| AW19_RS18235 () | 3938321..3938968 | + | 648 | WP_071841748.1 | hypothetical protein | VF |
| AW19_RS18240 () | 3939070..3939744 | + | 675 | WP_042562664.1 | TIGR03759 family integrating conjugative element protein | - |
| AW19_RS18245 () | 3939780..3940277 | + | 498 | WP_042562665.1 | integrating conjugative element protein | - |
| AW19_RS18250 () | 3940413..3942482 | + | 2070 | WP_042562543.1 | type IV conjugative transfer system coupling protein TraD | - |
| AW19_RS18255 () | 3942517..3943275 | + | 759 | WP_042562666.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| AW19_RS18260 () | 3943930..3945849 | + | 1920 | WP_042562544.1 | NACHT domain-containing protein | - |
| AW19_RS18265 () | 3945969..3946451 | + | 483 | WP_042562545.1 | TIR domain-containing protein | - |
| AW19_RS18270 () | 3946609..3948045 | + | 1437 | WP_042562546.1 | SIR2 family protein | - |
| AW19_RS18275 () | 3948160..3949326 | + | 1167 | WP_042562547.1 | toll/interleukin-1 receptor domain-containing protein | - |
| AW19_RS18280 () | 3950204..3950518 | + | 315 | WP_042562548.1 | hypothetical protein | - |
| AW19_RS18285 () | 3950515..3950751 | + | 237 | WP_042562549.1 | TIGR03758 family integrating conjugative element protein | - |
| AW19_RS18290 () | 3950859..3951161 | + | 303 | WP_144404295.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| AW19_RS18295 () | 3951174..3951554 | + | 381 | WP_042562551.1 | TIGR03750 family conjugal transfer protein | - |
| AW19_RS18300 () | 3951547..3952200 | + | 654 | WP_042562552.1 | TIGR03746 family integrating conjugative element protein | - |
| AW19_RS18305 () | 3952227..3953102 | + | 876 | WP_080868747.1 | TIGR03749 family integrating conjugative element protein | - |
| AW19_RS18310 () | 3953092..3954576 | + | 1485 | WP_042562553.1 | TIGR03752 family integrating conjugative element protein | - |
| AW19_RS18315 () | 3954586..3954996 | + | 411 | WP_042562554.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| AW19_RS18320 () | 3954996..3957794 | + | 2799 | WP_080868721.1 | conjugative transfer ATPase | - |
| AW19_RS18325 () | 3957972..3958304 | - | 333 | WP_042562555.1 | hypothetical protein | - |
| AW19_RS18335 () | 3958706..3959059 | + | 354 | WP_042562557.1 | helix-turn-helix domain-containing protein | - |
| AW19_RS18340 () | 3959184..3959501 | - | 318 | WP_004705512.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| AW19_RS18345 () | 3959503..3959847 | - | 345 | WP_004705513.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AW19_RS18350 () | 3960207..3960389 | - | 183 | WP_042562558.1 | hypothetical protein | - |
| AW19_RS18355 () | 3960625..3961269 | - | 645 | WP_042562559.1 | hypothetical protein | - |
| AW19_RS18360 () | 3961292..3961540 | - | 249 | WP_042562560.1 | hypothetical protein | - |
| AW19_RS18365 () | 3962314..3963552 | + | 1239 | Protein_3505 | IS110 family transposase ISCps4 | Transposase |
| AW19_RS18370 () | 3964061..3965137 | + | 1077 | WP_052488220.1 | hypothetical protein | - |
| AW19_RS18375 () | 3965140..3966057 | + | 918 | WP_042562561.1 | hypothetical protein | - |
| AW19_RS22245 () | 3966334..3966714 | - | 381 | WP_162484229.1 | hypothetical protein | - |
| AW19_RS18380 () | 3966665..3967812 | - | 1148 | Protein_3509 | IS30 family transposase ISCfr4 | Transposase |
| AW19_RS18385 () | 3967932..3968270 | - | 339 | WP_042562562.1 | helix-turn-helix domain-containing protein | - |
| AW19_RS18390 () | 3968267..3968584 | - | 318 | WP_080868746.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AW19_RS18395 () | 3968955..3969353 | + | 399 | WP_042562564.1 | TIGR03757 family integrating conjugative element protein | - |
| AW19_RS18400 () | 3969353..3970306 | + | 954 | WP_042562565.1 | TIGR03756 family integrating conjugative element protein | - |
| AW19_RS18405 () | 3970330..3971751 | + | 1422 | WP_042562566.1 | integrating conjugative element protein | - |
| AW19_RS18410 () | 3971835..3972110 | + | 276 | WP_042562567.1 | hypothetical protein | - |
| AW19_RS18415 () | 3972110..3973612 | + | 1503 | WP_042562568.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| AW19_RS18420 () | 3973648..3973866 | - | 219 | WP_042562569.1 | hypothetical protein | - |
| AW19_RS18430 () | 3974424..3975598 | + | 1175 | WP_144242873.1 | IS3 family transposase ISSlo2 | Transposase |
| AW19_RS18435 () | 3975543..3975911 | + | 369 | WP_080868716.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AW19_RS18440 () | 3975892..3976248 | + | 357 | WP_042562570.1 | putative addiction module antidote protein | - |
| AW19_RS18450 () | 3976725..3977144 | + | 420 | WP_042562572.1 | hypothetical protein | - |
| AW19_RS18455 () | 3977131..3977568 | + | 438 | WP_042562573.1 | hypothetical protein | - |
| AW19_RS18465 () | 3978650..3979531 | + | 882 | WP_042562575.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| AW19_RS22075 () | 3979536..3979847 | - | 312 | WP_144404288.1 | hypothetical protein | - |
| AW19_RS18470 () | 3980789..3981778 | - | 990 | WP_042562576.1 | RelA/SpoT domain-containing protein | - |
| AW19_RS18475 () | 3981775..3982866 | - | 1092 | WP_042562577.1 | nucleoid-associated protein | - |
| AW19_RS18480 () | 3982887..3983333 | - | 447 | WP_042562578.1 | DUF4231 domain-containing protein | - |
| AW19_RS18485 () | 3983852..3984268 | - | 417 | WP_042562579.1 | hypothetical protein | - |
| AW19_RS18490 () | 3984955..3985929 | + | 975 | WP_042562671.1 | DUF1738 domain-containing protein | - |
| AW19_RS18495 () | 3985952..3986251 | + | 300 | WP_042562580.1 | TA system toxin CbtA family protein | - |
| AW19_RS18500 () | 3987032..3987841 | + | 810 | WP_042562581.1 | DNA/RNA non-specific endonuclease | - |
| AW19_RS18505 () | 3987957..3989072 | + | 1116 | WP_071841812.1 | TraI domain-containing protein | - |
| AW19_RS18510 () | 3989365..3991239 | + | 1875 | WP_042562582.1 | AAA family ATPase | - |
| AW19_RS18515 () | 3991236..3992963 | + | 1728 | WP_042562583.1 | ATP-dependent helicase | - |
| AW19_RS18520 () | 3993109..3993780 | - | 672 | WP_019082607.1 | hypothetical protein | - |
| AW19_RS18525 () | 3994123..3995283 | + | 1161 | WP_042562584.1 | IS30 family transposase ISCfr4 | Transposase |
| AW19_RS18530 () | 3995447..3995938 | - | 492 | WP_050111686.1 | hypothetical protein | - |
| AW19_RS22340 () | 3996137..3996313 | - | 177 | WP_042562585.1 | hypothetical protein | - |
| AW19_RS21420 () | 3996505..3996690 | + | 186 | WP_071841747.1 | host cell division inhibitor Icd-like protein | - |
| AW19_RS18540 () | 3996677..3996904 | + | 228 | WP_144404287.1 | hypothetical protein | - |
| AW19_RS18545 () | 3997009..3997971 | + | 963 | WP_042562587.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| AW19_RS18555 () | 3998413..3998988 | - | 576 | WP_038637015.1 | transcriptional regulator | - |
| AW19_RS18560 () | 3999456..4000226 | + | 771 | WP_038637013.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| AW19_RS18565 () | 4000297..4001181 | + | 885 | WP_038637012.1 | 2-hydroxy-3-oxopropionate reductase | - |
| AW19_RS18570 () | 4001338..4002486 | + | 1149 | WP_038637006.1 | glycerate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|