MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 55362 bp
Accession: NZ_CP009363 Location: 1..55362 Organism: Yersinia frederiksenii Y225 Replicon: plasmid unnsmrf
Accession: NZ_CP009363 Location: 1..55362 Organism: Yersinia frederiksenii Y225 Replicon: plasmid unnsmrf
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AW19_RS00010 () | 499..2862 | - | 2364 | WP_042562266.1 | VirB4 family type IV secretion system protein | - |
| AW19_RS00015 () | 2852..3163 | - | 312 | WP_042562267.1 | hypothetical protein | - |
| AW19_RS00020 () | 3243..3701 | - | 459 | WP_052488151.1 | ATP-binding protein | - |
| AW19_RS00025 () | 3766..4059 | - | 294 | WP_042562269.1 | TrbC/VirB2 family protein | - |
| AW19_RS00030 () | 4060..4707 | - | 648 | WP_042562270.1 | Type IV secretion system protein virB1 | VF |
| AW19_RS00035 () | 4772..5116 | - | 345 | WP_052488152.1 | hypothetical protein | - |
| AW19_RS22145 () | 5172..5339 | - | 168 | WP_158502689.1 | hypothetical protein | - |
| AW19_RS00040 () | 5378..5620 | - | 243 | WP_158502690.1 | hypothetical protein | - |
| AW19_RS00045 () | 6150..6368 | - | 219 | WP_042562272.1 | hypothetical protein | - |
| AW19_RS00050 () | 6642..6929 | - | 288 | WP_042562273.1 | hypothetical protein | - |
| AW19_RS00055 () | 7095..7439 | - | 345 | WP_042562274.1 | hypothetical protein | - |
| AW19_RS00060 () | 7469..8509 | - | 1041 | WP_042562275.1 | replication initiation protein | - |
| AW19_RS00065 () | 10520..11035 | + | 516 | WP_042562276.1 | J domain-containing protein | - |
| AW19_RS00070 () | 11088..11633 | + | 546 | WP_042562277.1 | hypothetical protein | - |
| AW19_RS00075 () | 11692..11982 | + | 291 | WP_042562278.1 | hypothetical protein | - |
| AW19_RS00080 () | 11998..12201 | + | 204 | WP_042562279.1 | helix-turn-helix domain-containing protein | - |
| AW19_RS00085 () | 13346..13624 | - | 279 | WP_042562280.1 | putative addiction module antidote protein | Antitoxin Detail |
| AW19_RS00090 () | 13621..13923 | - | 303 | WP_042562281.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AW19_RS00095 () | 14175..14621 | + | 447 | WP_042562282.1 | hypothetical protein | - |
| AW19_RS00100 () | 14949..15683 | - | 735 | WP_042562283.1 | hypothetical protein | - |
| AW19_RS00105 () | 15739..16452 | - | 714 | WP_042562284.1 | hypothetical protein | - |
| AW19_RS00110 () | 16449..17102 | - | 654 | WP_042562285.1 | hypothetical protein | - |
| AW19_RS00115 () | 17412..17759 | + | 348 | WP_042562286.1 | hypothetical protein | Relaxase |
| AW19_RS20615 () | 17749..21549 | + | 3801 | WP_052488153.1 | hypothetical protein | - |
| AW19_RS00130 () | 21900..22184 | - | 285 | WP_052488154.1 | hypothetical protein | - |
| AW19_RS00135 () | 22231..22881 | - | 651 | WP_042562289.1 | AAA family ATPase | - |
| AW19_RS21745 () | 23287..23532 | + | 246 | WP_144404298.1 | hypothetical protein | - |
| AW19_RS00140 () | 23583..23828 | - | 246 | WP_042562290.1 | hypothetical protein | - |
| AW19_RS00145 () | 23913..24743 | - | 831 | WP_042562291.1 | SprT-like domain-containing protein | - |
| AW19_RS00150 () | 24817..24999 | - | 183 | WP_042562292.1 | hypothetical protein | - |
| AW19_RS20620 () | 25074..25376 | - | 303 | WP_144404299.1 | hypothetical protein | - |
| AW19_RS00160 () | 25472..25732 | - | 261 | WP_042562293.1 | hypothetical protein | - |
| AW19_RS00165 () | 25744..25947 | - | 204 | WP_042562294.1 | hypothetical protein | - |
| AW19_RS00170 () | 25944..26144 | - | 201 | WP_144404300.1 | hypothetical protein | - |
| AW19_RS00175 () | 27182..27952 | - | 771 | WP_042562296.1 | tyrosine-type recombinase/integrase | - |
| AW19_RS00180 () | 28348..28548 | + | 201 | WP_042562297.1 | hypothetical protein | - |
| AW19_RS00185 () | 28924..29289 | + | 366 | WP_042562298.1 | hypothetical protein | - |
| AW19_RS20625 () | 29338..29868 | + | 531 | WP_052488156.1 | hypothetical protein | - |
| AW19_RS00200 () | 30582..30785 | - | 204 | WP_042562319.1 | hemolysin expression modulator Hha | - |
| AW19_RS22345 () | 30858..31715 | - | 858 | WP_200889035.1 | PcfJ domain-containing protein | - |
| AW19_RS20630 () | 32738..33307 | - | 570 | WP_052488158.1 | hypothetical protein | - |
| AW19_RS00215 () | 33398..33841 | - | 444 | WP_042562301.1 | H-NS histone family protein | - |
| AW19_RS00220 () | 33945..36191 | - | 2247 | WP_042562302.1 | hypothetical protein | - |
| AW19_RS00225 () | 36409..36756 | - | 348 | WP_042562303.1 | single-stranded DNA-binding protein | - |
| AW19_RS00230 () | 36919..38193 | - | 1275 | WP_052488160.1 | hypothetical protein | VF |
| AW19_RS00235 () | 38190..38813 | - | 624 | WP_042562304.1 | prepilin peptidase | - |
| AW19_RS00240 () | 38813..39304 | - | 492 | WP_080871029.1 | hypothetical protein | VF |
| AW19_RS00245 () | 39325..39915 | - | 591 | WP_042562305.1 | hypothetical protein | VF |
| AW19_RS00250 () | 39966..41072 | - | 1107 | WP_042562306.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| AW19_RS00255 () | 41065..42552 | - | 1488 | WP_052488177.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| AW19_RS00260 () | 42562..43068 | - | 507 | WP_052488163.1 | type IV pilus biogenesis protein PilP | - |
| AW19_RS00265 () | 43055..44362 | - | 1308 | WP_042562308.1 | type 4b pilus protein PilO2 | - |
| AW19_RS00270 () | 44367..46022 | - | 1656 | WP_052488165.1 | Outer membrane lipoprotein BfpB | VF |
| AW19_RS00275 () | 46051..46479 | - | 429 | WP_042562309.1 | hypothetical protein | VF |
| AW19_RS20635 () | 46479..47564 | - | 1086 | WP_052488166.1 | hypothetical protein | VF |
| AW19_RS22350 () | 47625..48116 | - | 492 | WP_052488169.1 | hypothetical protein | - |
| AW19_RS00290 () | 48120..50072 | - | 1953 | WP_042562310.1 | type IV secretory system conjugative DNA transfer family protein | - |
| AW19_RS00295 () | 50082..50261 | - | 180 | WP_042562311.1 | hypothetical protein | - |
| AW19_RS00300 () | 50271..51290 | - | 1020 | WP_042562312.1 | Type IV secretion system protein VirB11 | VF |
| AW19_RS00305 () | 51340..52173 | - | 834 | WP_080871032.1 | Type IV secretion system protein virB10 | VF |
| AW19_RS00310 () | 52530..53321 | - | 792 | WP_042562313.1 | Type IV secretion system protein PtlF | VF |
| AW19_RS00315 () | 53318..54067 | - | 750 | WP_042562314.1 | Type IV secretion system protein PtlE | VF |
| AW19_RS00320 () | 54208..55185 | - | 978 | WP_052488171.1 | type IV secretion system protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|