MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 134722 bp
Accession: NZ_CP009295 Location: 1..134722 Organism: Novosphingobium pentaromativorans US6-1 Replicon: plasmid pLA5
Accession: NZ_CP009295 Location: 1..134722 Organism: Novosphingobium pentaromativorans US6-1 Replicon: plasmid pLA5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JI59_RS24460 () | 1..1194 | + | 1194 | WP_007015708.1 | AAA family ATPase | - |
| JI59_RS24465 () | 1304..2377 | + | 1074 | WP_007015707.1 | ParB/RepB/Spo0J family partition protein | - |
| JI59_RS24470 () | 2484..3761 | + | 1278 | WP_007015706.1 | replication initiator protein A | - |
| JI59_RS24475 () | 4454..5719 | - | 1266 | WP_007015705.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| JI59_RS24480 () | 5709..5945 | - | 237 | WP_007015704.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| JI59_RS24485 () | 6277..6756 | + | 480 | WP_007015703.1 | hypothetical protein | - |
| JI59_RS24490 () | 6774..7385 | + | 612 | WP_138921566.1 | hypothetical protein | - |
| JI59_RS24495 () | 7382..7870 | + | 489 | WP_007015701.1 | hypothetical protein | - |
| JI59_RS24500 () | 7964..8482 | + | 519 | WP_007015700.1 | DUF2384 domain-containing protein | - |
| JI59_RS24505 () | 8790..9827 | + | 1038 | WP_007015769.1 | tyrosine-type recombinase/integrase | - |
| JI59_RS24510 () | 10064..10552 | + | 489 | WP_007015770.1 | hypothetical protein | - |
| JI59_RS24515 () | 11233..12357 | + | 1125 | WP_039858870.1 | Fic family protein | - |
| JI59_RS24520 () | 12496..12909 | - | 414 | WP_007015772.1 | Tn3 family transposase ISPsy42 | Transposase |
| JI59_RS24525 () | 13049..13666 | - | 618 | WP_007015774.1 | sterol desaturase family protein | - |
| JI59_RS24530 () | 13868..14629 | + | 762 | WP_007015773.1 | putative oxidoreductase EphD | VF |
| JI59_RS24535 () | 14610..16103 | - | 1494 | WP_007015775.1 | hypothetical protein | VF |
| JI59_RS24540 () | 16462..17643 | + | 1182 | WP_052118064.1 | hypothetical protein | VF |
| JI59_RS24545 () | 17674..18114 | - | 441 | WP_007015778.1 | DUF393 domain-containing protein | - |
| JI59_RS24550 () | 18111..18734 | - | 624 | WP_007015779.1 | hypothetical protein | - |
| JI59_RS24555 () | 18858..19082 | - | 225 | WP_041565075.1 | hypothetical protein | - |
| JI59_RS24560 () | 19079..19534 | - | 456 | WP_203226105.1 | hypothetical protein | - |
| JI59_RS24565 () | 19668..21356 | - | 1689 | WP_041565076.1 | hypothetical protein | - |
| JI59_RS24570 () | 21369..22868 | - | 1500 | WP_007015783.1 | lipopolysaccharide biosynthesis protein | - |
| JI59_RS24575 () | 22936..24270 | - | 1335 | WP_007015784.1 | GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase | VF |
| JI59_RS24580 () | 24297..25241 | - | 945 | WP_007015785.1 | Putative mycofactocin biosynthesis glycosyltransferase MftF | VF |
| JI59_RS27505 () | 25290..25472 | + | 183 | WP_203226106.1 | hypothetical protein | - |
| JI59_RS24585 () | 25836..26423 | - | 588 | WP_138921570.1 | porin family protein | - |
| JI59_RS24590 () | 26626..26928 | + | 303 | WP_007015787.1 | hypothetical protein | - |
| JI59_RS24595 () | 27024..27977 | + | 954 | WP_007015788.1 | curli production assembly protein CsgG | - |
| JI59_RS26965 () | 28061..28306 | + | 246 | WP_203226107.1 | hypothetical protein | - |
| JI59_RS24605 () | 28334..28684 | + | 351 | WP_039858883.1 | DUF4810 domain-containing protein | - |
| JI59_RS24610 () | 28705..29433 | + | 729 | WP_138921571.1 | DUF799 family lipoprotein | - |
| JI59_RS24615 () | 29519..30556 | - | 1038 | WP_007015792.1 | phytanoyl-CoA dioxygenase family protein | - |
| JI59_RS24620 () | 30740..31510 | + | 771 | WP_007015793.1 | aspartyl/asparaginyl beta-hydroxylase domain-containing protein | - |
| JI59_RS24625 () | 31586..32416 | - | 831 | WP_039858886.1 | 2-dehydro-3-deoxyphosphooctonate aldolase | VF |
| JI59_RS24630 () | 32646..33632 | + | 987 | WP_041565077.1 | Arabinose 5-phosphate isomerase KdsD | VF |
| JI59_RS24635 () | 33664..34515 | + | 852 | WP_007015795.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| JI59_RS24640 () | 34560..35168 | + | 609 | WP_007015796.1 | histidine phosphatase family protein | - |
| JI59_RS24645 () | 35165..36838 | + | 1674 | WP_041565078.1 | hypothetical protein | VF |
| JI59_RS24650 () | 36851..38068 | + | 1218 | WP_007015798.1 | D-inositol-3-phosphate glycosyltransferase | VF |
| JI59_RS24655 () | 38075..38503 | - | 429 | WP_039858909.1 | hypothetical protein | - |
| JI59_RS24660 () | 38730..39332 | + | 603 | WP_007015800.1 | helix-turn-helix transcriptional regulator | - |
| JI59_RS24665 () | 39329..40543 | + | 1215 | WP_007015801.1 | Serine/threonine-protein kinase toxin HipA | VF |
| JI59_RS26970 () | 40895..41530 | - | 636 | WP_138921572.1 | hypothetical protein | - |
| JI59_RS24670 () | 42284..42715 | + | 432 | WP_007015803.1 | hypothetical protein | - |
| JI59_RS24675 () | 42726..43640 | - | 915 | WP_007015804.1 | hypothetical protein | - |
| JI59_RS24680 () | 43650..46163 | - | 2514 | WP_007015805.1 | fimbria/pilus outer membrane usher protein | - |
| JI59_RS24685 () | 46171..46956 | - | 786 | WP_007015806.1 | fimbria/pilus periplasmic chaperone | - |
| JI59_RS24690 () | 47113..47667 | - | 555 | WP_007015807.1 | hypothetical protein | - |
| JI59_RS24695 () | 48294..49382 | - | 1089 | WP_007015808.1 | PepSY domain-containing protein | - |
| JI59_RS24700 () | 49396..51564 | - | 2169 | WP_007015809.1 | TonB-dependent receptor | - |
| JI59_RS24705 () | 51697..53739 | - | 2043 | WP_007015810.1 | hypothetical protein | - |
| JI59_RS25865 () | 54041..54448 | + | 408 | WP_052118057.1 | DUF2442 domain-containing protein | - |
| JI59_RS24715 () | 54811..55428 | - | 618 | WP_007015811.1 | sterol desaturase family protein | - |
| JI59_RS24725 () | 55983..56969 | + | 987 | WP_041565080.1 | Arabinose 5-phosphate isomerase KdsD | VF |
| JI59_RS26530 () | 57025..57912 | - | 888 | Protein_55 | recombinase family protein | - |
| JI59_RS24735 () | 57952..58254 | - | 303 | Protein_56 | IS3 family transposase ISGdi14 | Transposase |
| JI59_RS24740 () | 58584..58826 | + | 243 | Protein_57 | IS481 family transposase ISSpal1 | Transposase |
| JI59_RS24745 () | 58946..60637 | + | 1692 | WP_081474105.1 | glycosyltransferase family 2 protein | - |
| JI59_RS24750 () | 60642..61427 | + | 786 | WP_052118059.1 | hypothetical protein | - |
| JI59_RS24755 () | 61583..62461 | + | 879 | WP_138921574.1 | phytanoyl-CoA dioxygenase family protein | - |
| JI59_RS24760 () | 62471..63469 | - | 999 | WP_007015818.1 | hypothetical protein | - |
| JI59_RS24765 () | 63612..64772 | + | 1161 | WP_007015819.1 | hypothetical protein | VF |
| JI59_RS24770 () | 64780..65562 | + | 783 | WP_007015820.1 | Polysialic acid transport protein KpsM | VF |
| JI59_RS24775 () | 65559..66194 | + | 636 | WP_007015821.1 | Polysialic acid transport ATP-binding protein KpsT | VF |
| JI59_RS24780 () | 66191..66463 | - | 273 | WP_007015822.1 | hypothetical protein | - |
| JI59_RS24785 () | 66586..69519 | - | 2934 | WP_007015768.1 | Tn3 family transposase TnpA_ISAzs29 | Transposase |
| JI59_RS24790 () | 69667..70272 | + | 606 | WP_026109404.1 | Tn3 family transposase ISPsy42 | Transposase |
| JI59_RS24795 () | 70269..71627 | + | 1359 | WP_007015766.1 | hypothetical protein | - |
| JI59_RS24800 () | 71697..73355 | + | 1659 | WP_007015765.1 | AAA family ATPase | - |
| JI59_RS24805 () | 73606..73896 | + | 291 | WP_039858854.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JI59_RS24810 () | 73886..74188 | + | 303 | WP_039330864.1 | HigA family addiction module antidote protein | - |
| JI59_RS24815 () | 74492..75328 | - | 837 | WP_062780548.1 | alpha/beta fold hydrolase | - |
| JI59_RS24820 () | 75725..76618 | - | 894 | WP_007015761.1 | Hydrogenase maturation factor HypB | VF |
| JI59_RS24825 () | 76618..76860 | - | 243 | WP_011536540.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| JI59_RS24830 () | 76860..77579 | - | 720 | WP_007015759.1 | high frequency lysogenization protein HflD | - |
| JI59_RS24835 () | 77595..78644 | - | 1050 | WP_007015758.1 | hydrogenase expression/formation protein HypE | - |
| JI59_RS24840 () | 78641..79774 | - | 1134 | WP_007015757.1 | hydrogenase formation protein HypD | - |
| JI59_RS24845 () | 79771..80457 | - | 687 | WP_085997523.1 | Phosphoheptose isomerase | VF |
| JI59_RS24850 () | 80451..80747 | - | 297 | WP_011536535.1 | HypC/HybG/HupF family hydrogenase formation chaperone | - |
| JI59_RS24855 () | 80738..83119 | - | 2382 | WP_007015754.1 | carbamoyltransferase HypF | - |
| JI59_RS24860 () | 83101..84360 | - | 1260 | WP_137776262.1 | hypothetical protein | - |
| JI59_RS24865 () | 84276..85211 | - | 936 | WP_137776261.1 | NifU family protein | - |
| JI59_RS27220 () | 85147..85368 | - | 222 | WP_007015751.1 | hypothetical protein | - |
| JI59_RS24875 () | 85380..85592 | - | 213 | WP_011536531.1 | hypothetical protein | - |
| JI59_RS24880 () | 85599..86597 | - | 999 | WP_007015749.1 | hypothetical protein | - |
| JI59_RS24885 () | 86694..87005 | - | 312 | WP_007015748.1 | hypothetical protein | - |
| JI59_RS24890 () | 87009..87494 | - | 486 | WP_007015747.1 | hydrogenase maturation protease | - |
| JI59_RS24895 () | 87482..87799 | - | 318 | WP_039330882.1 | hypothetical protein | - |
| JI59_RS24900 () | 87811..88092 | - | 282 | WP_085997524.1 | hypothetical protein | - |
| JI59_RS24905 () | 88281..89876 | - | 1596 | WP_039330883.1 | nickel-dependent hydrogenase large subunit | - |
| JI59_RS24910 () | 89938..90900 | - | 963 | WP_011536524.1 | hydrogenase | - |
| JI59_RS24915 () | 91392..92840 | - | 1449 | WP_039330884.1 | Transcriptional regulatory protein ZraR | VF |
| JI59_RS24920 () | 92990..94255 | - | 1266 | WP_007015740.1 | DUF3422 domain-containing protein | - |
| JI59_RS24925 () | 94433..94930 | - | 498 | WP_039330979.1 | hypothetical protein | - |
| JI59_RS24930 () | 95085..95714 | - | 630 | WP_007015738.1 | hypothetical protein | - |
| JI59_RS24935 () | 95775..96443 | - | 669 | WP_007015737.1 | hypothetical protein | - |
| JI59_RS24940 () | 96487..97860 | - | 1374 | WP_007015736.1 | hypothetical protein | - |
| JI59_RS24945 () | 97861..98430 | - | 570 | WP_007015735.1 | Tn3 family transposase TnpR_ISMex38 | Transposase |
| JI59_RS24950 () | 98571..101540 | + | 2970 | WP_007015734.1 | Tn3 family transposase TnpA_ISAli20 | Transposase |
| JI59_RS25870 () | 101572..102234 | - | 663 | WP_052118060.1 | NAD-dependent epimerase/dehydratase family protein | - |
| JI59_RS24960 () | 102231..103874 | - | 1644 | WP_007015732.1 | hypothetical protein | - |
| JI59_RS25875 () | 104319..105998 | + | 1680 | WP_007015731.1 | hypothetical protein | - |
| JI59_RS24970 () | 106010..107263 | + | 1254 | WP_007015730.1 | hypothetical protein | - |
| JI59_RS24975 () | 107394..108521 | + | 1128 | WP_052118067.1 | hypothetical protein | VF |
| JI59_RS24980 () | 108575..109138 | + | 564 | WP_039858825.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | VF |
| JI59_RS24985 () | 109141..110202 | + | 1062 | WP_007015727.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| JI59_RS24990 () | 110199..111089 | + | 891 | WP_007015726.1 | dTDP-4-dehydrorhamnose reductase | - |
| JI59_RS24995 () | 111133..112002 | + | 870 | WP_007015725.1 | Glucose-1-phosphate thymidylyltransferase | VF |
| JI59_RS25000 () | 112446..113816 | + | 1371 | WP_007015846.1 | IS1380 family transposase ISSp1 | Transposase |
| JI59_RS26545 () | 114052..114471 | + | 420 | WP_081976354.1 | phytanoyl-CoA dioxygenase family protein | - |
| JI59_RS25005 () | 114555..115304 | - | 750 | WP_039858807.1 | Putative glycosyltransferase EpsE | VF |
| JI59_RS26550 () | 115337..117082 | - | 1746 | WP_138921564.1 | hypothetical protein | - |
| JI59_RS25015 () | 117433..117657 | + | 225 | WP_007015722.1 | ISNCY family transposase ISRsp17 | Transposase |
| JI59_RS25020 () | 117696..118103 | - | 408 | WP_138921563.1 | hypothetical protein | - |
| JI59_RS25025 () | 118534..119274 | + | 741 | WP_039858798.1 | class I SAM-dependent methyltransferase | - |
| JI59_RS27225 () | 119671..119808 | + | 138 | WP_007015718.1 | hypothetical protein | - |
| JI59_RS25030 () | 120080..121546 | - | 1467 | WP_007015717.1 | hypothetical protein | - |
| JI59_RS25035 () | 121951..123891 | + | 1941 | WP_138921568.1 | spermidine synthase | - |
| JI59_RS25040 () | 124007..125446 | + | 1440 | WP_007015715.1 | hypothetical protein | - |
| JI59_RS25045 () | 125449..126057 | - | 609 | WP_007015714.1 | VTT domain-containing protein | - |
| JI59_RS25050 () | 126149..126961 | - | 813 | WP_007015713.1 | glycosyltransferase family 2 protein | - |
| JI59_RS25055 () | 127175..127999 | + | 825 | WP_007015712.1 | hypothetical protein | - |
| JI59_RS25060 () | 128649..129767 | + | 1119 | WP_039858814.1 | neprosin family prolyl endopeptidase | - |
| JI59_RS26980 () | 131211..133271 | + | 2061 | WP_138921567.1 | hypothetical protein | - |
| JI59_RS25880 () | 133305..134543 | + | 1239 | WP_052118063.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|