MGE detailed information
MGE type: Prophage MGE length: 35161 bp
Accession: NZ_CP009290 Location: 6261988..6297148 Organism: Pseudomonas chlororaphis subsp. aurantiaca strain JD37 Replicon: chromosome
Accession: NZ_CP009290 Location: 6261988..6297148 Organism: Pseudomonas chlororaphis subsp. aurantiaca strain JD37 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JM49_RS28000 () | 6257459..6257917 | - | 459 | WP_038582846.1 | hypothetical protein | - |
| JM49_RS28005 () | 6258279..6259244 | + | 966 | WP_038582849.1 | alpha/beta fold hydrolase | - |
| JM49_RS28010 () | 6259349..6259747 | + | 399 | WP_038582851.1 | hypothetical protein | - |
| JM49_RS28015 () | 6260025..6261422 | - | 1398 | WP_038582853.1 | GABA permease | - |
| JM49_RS28020 () | 6261988..6262761 | + | 774 | WP_009046514.1 | Octopine permease ATP-binding protein P | VF |
| JM49_RS28025 () | 6262775..6263530 | + | 756 | WP_009046513.1 | ABC transporter substrate-binding protein | - |
| JM49_RS28030 () | 6263608..6264303 | + | 696 | WP_038582856.1 | ABC transporter permease | - |
| JM49_RS28035 () | 6264300..6264989 | + | 690 | WP_007922607.1 | ABC transporter permease | - |
| JM49_RS28040 () | 6265128..6266339 | + | 1212 | WP_038582858.1 | methyltransferase | - |
| JM49_RS28045 () | 6266694..6267515 | + | 822 | WP_038582861.1 | FkbM family methyltransferase | - |
| JM49_RS28055 () | 6267729..6268787 | - | 1059 | WP_052107433.1 | IS91 family transposase ISCARN110 | Transposase |
| JM49_RS28060 () | 6268790..6269026 | - | 237 | WP_038582864.1 | helix-turn-helix transcriptional regulator | - |
| JM49_RS28065 () | 6269119..6269337 | + | 219 | WP_038582867.1 | hypothetical protein | - |
| JM49_RS28070 () | 6269347..6272067 | + | 2721 | WP_038582870.1 | toprim domain-containing protein | - |
| JM49_RS31250 () | 6272111..6272470 | - | 360 | WP_155290756.1 | hypothetical protein | - |
| JM49_RS28075 () | 6272507..6272800 | + | 294 | WP_038582873.1 | hypothetical protein | - |
| JM49_RS28080 () | 6272809..6273060 | + | 252 | WP_038582876.1 | hypothetical protein | - |
| JM49_RS28085 () | 6273123..6273416 | + | 294 | WP_038584000.1 | hypothetical protein | - |
| JM49_RS28090 () | 6273409..6273648 | + | 240 | WP_038582879.1 | Arc family DNA-binding protein | - |
| JM49_RS28095 () | 6273642..6273872 | + | 231 | WP_052107434.1 | hypothetical protein | - |
| JM49_RS31450 () | 6274297..6274512 | + | 216 | WP_038582880.1 | hypothetical protein | - |
| JM49_RS30865 () | 6274485..6274748 | - | 264 | WP_080748343.1 | ogr/Delta-like zinc finger family protein | - |
| JM49_RS28105 () | 6274829..6275680 | - | 852 | WP_172666962.1 | phage portal protein | - |
| JM49_RS28110 () | 6275607..6277655 | - | 2049 | WP_038582886.1 | terminase family protein | - |
| JM49_RS28115 () | 6277819..6278769 | + | 951 | WP_038582889.1 | GPO family capsid scaffolding protein | - |
| JM49_RS28120 () | 6278769..6279788 | + | 1020 | WP_038582891.1 | phage major capsid protein, P2 family | - |
| JM49_RS28125 () | 6279788..6280510 | + | 723 | WP_038582893.1 | terminase | - |
| JM49_RS28130 () | 6280609..6281070 | + | 462 | WP_038582896.1 | head completion/stabilization protein | - |
| JM49_RS28135 () | 6281067..6281522 | + | 456 | WP_038582899.1 | phage tail protein | - |
| JM49_RS28140 () | 6281512..6282189 | + | 678 | WP_038582902.1 | hypothetical protein | - |
| JM49_RS28145 () | 6282201..6283316 | + | 1116 | WP_038582904.1 | DUF2586 family protein | - |
| JM49_RS28150 () | 6283320..6283769 | + | 450 | WP_038582906.1 | DUF2597 family protein | - |
| JM49_RS28155 () | 6283769..6283981 | + | 213 | WP_038582908.1 | TraR/DksA C4-type zinc finger protein | - |
| JM49_RS28160 () | 6283978..6284184 | + | 207 | WP_038582910.1 | hypothetical protein | - |
| JM49_RS28165 () | 6284181..6284711 | + | 531 | WP_038582911.1 | lysozyme | - |
| JM49_RS28170 () | 6284708..6285184 | + | 477 | WP_038582912.1 | lysis system i-spanin subunit Rz | - |
| JM49_RS28175 () | 6285191..6285478 | + | 288 | WP_038582913.1 | phage protein | - |
| JM49_RS28180 () | 6285653..6287758 | + | 2106 | WP_038582915.1 | phage tail tape measure protein | - |
| JM49_RS28185 () | 6287758..6288075 | + | 318 | WP_038582917.1 | DUF2590 family protein | - |
| JM49_RS28190 () | 6288072..6289244 | + | 1173 | WP_038582919.1 | baseplate J/gp47 family protein | - |
| JM49_RS28195 () | 6289241..6289765 | + | 525 | WP_038582921.1 | phage tail protein | - |
| JM49_RS28200 () | 6289775..6291781 | + | 2007 | WP_038582923.1 | phage tail protein | - |
| JM49_RS28205 () | 6291790..6292500 | + | 711 | WP_038582925.1 | hypothetical protein | - |
| JM49_RS28210 () | 6292497..6293420 | + | 924 | WP_038584004.1 | hypothetical protein | - |
| JM49_RS28215 () | 6293417..6293959 | + | 543 | WP_038582927.1 | hypothetical protein | - |
| JM49_RS28220 () | 6293956..6294660 | + | 705 | WP_038582929.1 | hypothetical protein | - |
| JM49_RS28225 () | 6294633..6295604 | + | 972 | WP_038582931.1 | hypothetical protein | - |
| JM49_RS28230 () | 6295601..6296242 | - | 642 | WP_052107453.1 | hypothetical protein | - |
| JM49_RS28235 () | 6296468..6296650 | + | 183 | WP_028681531.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| JM49_RS28240 () | 6296723..6297148 | + | 426 | WP_038582934.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| JM49_RS31255 () | 6298115..6299191 | + | 1077 | WP_155290757.1 | hypothetical protein | - |
| JM49_RS31260 () | 6300019..6300348 | - | 330 | WP_155290758.1 | hypothetical protein | - |
| JM49_RS31265 () | 6300348..6301175 | - | 828 | WP_155290759.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|