MGE detailed information
MGE type: Prophage MGE length: 86915 bp
Accession: NZ_CP009237 Location: 50790..137704 Organism: Glaesserella parasuis strain KL0318 Replicon: chromosome
Accession: NZ_CP009237 Location: 50790..137704 Organism: Glaesserella parasuis strain KL0318 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JT17_RS00190 () | 48385..48768 | + | 384 | WP_021109639.1 | 30S ribosome-binding factor RbfA | - |
| JT17_RS00195 () | 48771..49688 | + | 918 | WP_021109638.1 | tRNA pseudouridine(55) synthase TruB | - |
| JT17_RS00200 () | 49698..50780 | + | 1083 | WP_043896512.1 | lytic murein transglycosylase | - |
| JT17_RS00205 () | 50790..51608 | + | 819 | WP_005713726.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | - |
| JT17_RS11450 () | 51996..52277 | + | 282 | WP_005713724.1 | integrase arm-type DNA-binding domain-containing protein | - |
| JT17_RS00220 () | 52334..53239 | + | 906 | WP_035494198.1 | Prophage integrase IntA ; Integrase | Integrase |
| JT17_RS00225 () | 53228..53431 | - | 204 | WP_005713720.1 | hypothetical protein | - |
| JT17_RS11260 () | 53520..54122 | - | 603 | WP_052157597.1 | Bro-N domain-containing protein | - |
| JT17_RS00240 () | 54707..55240 | - | 534 | WP_010786726.1 | hypothetical protein | - |
| JT17_RS00245 () | 55496..55738 | - | 243 | WP_005713710.1 | hypothetical protein | - |
| JT17_RS00250 () | 56081..56302 | - | 222 | WP_044008915.1 | hypothetical protein | - |
| JT17_RS11455 () | 56317..56487 | + | 171 | WP_010786728.1 | DUF1508 domain-containing protein | - |
| JT17_RS00255 () | 56514..56801 | - | 288 | WP_012621801.1 | hypothetical protein | - |
| JT17_RS00260 () | 57405..57851 | - | 447 | WP_005714539.1 | hypothetical protein | - |
| JT17_RS00265 () | 57911..58201 | + | 291 | WP_005714537.1 | putative addiction module antidote protein | - |
| JT17_RS00270 () | 58229..59068 | - | 840 | WP_005714536.1 | DUF3800 domain-containing protein | - |
| JT17_RS00275 () | 59249..60097 | - | 849 | WP_005714534.1 | KilA-N domain-containing protein | - |
| JT17_RS00280 () | 60197..60880 | - | 684 | WP_005714533.1 | helix-turn-helix transcriptional regulator | - |
| JT17_RS00285 () | 61011..61211 | + | 201 | WP_005714531.1 | helix-turn-helix domain-containing protein | - |
| JT17_RS00290 () | 61232..61508 | + | 277 | Protein_58 | hypothetical protein | - |
| JT17_RS00295 () | 61553..62278 | + | 726 | WP_016527921.1 | Rha family transcriptional regulator | - |
| JT17_RS00300 () | 62275..63105 | + | 831 | WP_044008916.1 | hypothetical protein | - |
| JT17_RS00305 () | 63105..63779 | + | 675 | WP_052157598.1 | hypothetical protein | - |
| JT17_RS00310 () | 63837..64265 | + | 429 | WP_044009517.1 | recombination protein NinB | - |
| JT17_RS00315 () | 64299..64712 | - | 414 | WP_005715065.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| JT17_RS00320 () | 64739..64921 | - | 183 | WP_005715063.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| JT17_RS00325 () | 65169..65738 | + | 570 | WP_044008917.1 | recombination protein NinG | - |
| JT17_RS00330 () | 65735..66112 | + | 378 | WP_044008918.1 | antitermination protein | - |
| JT17_RS00335 () | 66139..66330 | - | 192 | WP_035491811.1 | hypothetical protein | - |
| JT17_RS00340 () | 66920..67510 | + | 591 | Protein_68 | phage antirepressor N-terminal domain-containing protein | - |
| JT17_RS00345 () | 68196..68759 | - | 564 | WP_005714778.1 | hypothetical protein | - |
| JT17_RS00350 () | 68873..69148 | + | 276 | WP_010786311.1 | hypothetical protein | - |
| JT17_RS00355 () | 69123..69668 | + | 546 | WP_026916880.1 | lysozyme | - |
| JT17_RS00360 () | 69641..69985 | + | 345 | WP_044008919.1 | DUF2570 family protein | - |
| JT17_RS12195 () | 69879..70163 | + | 285 | WP_198355024.1 | hypothetical protein | - |
| JT17_RS12200 () | 70389..70535 | + | 147 | WP_164681526.1 | hypothetical protein | - |
| JT17_RS00365 () | 70551..71003 | + | 453 | WP_044008920.1 | terminase small subunit | - |
| JT17_RS00370 () | 70987..72204 | + | 1218 | WP_044008921.1 | PBSX family phage terminase large subunit | - |
| JT17_RS00375 () | 72210..73730 | + | 1521 | WP_021110525.1 | DUF1073 domain-containing protein | - |
| JT17_RS00380 () | 73693..74559 | + | 867 | WP_005713545.1 | minor capsid protein | - |
| JT17_RS00385 () | 74659..75930 | + | 1272 | WP_044008922.1 | DUF2213 domain-containing protein | - |
| JT17_RS00390 () | 75942..76454 | + | 513 | WP_005713548.1 | hypothetical protein | - |
| JT17_RS00395 () | 76557..77441 | - | 885 | WP_044008923.1 | IS256 family transposase IS1414 | Transposase |
| JT17_RS00400 () | 77440..78585 | + | 1146 | WP_052157599.1 | DUF2184 domain-containing protein | - |
| JT17_RS00405 () | 78649..79014 | + | 366 | WP_005713552.1 | hypothetical protein | - |
| JT17_RS00410 () | 79017..79445 | + | 429 | WP_005713553.1 | DUF4054 domain-containing protein | - |
| JT17_RS00415 () | 79442..79942 | + | 501 | WP_035494987.1 | hypothetical protein | - |
| JT17_RS00420 () | 79943..80500 | + | 558 | WP_005713559.1 | hypothetical protein | - |
| JT17_RS00425 () | 80616..80996 | + | 381 | WP_035494986.1 | hypothetical protein | - |
| JT17_RS00430 () | 80981..81487 | + | 507 | WP_035494985.1 | hypothetical protein | - |
| JT17_RS00435 () | 81497..82975 | + | 1479 | WP_035519468.1 | DUF3383 domain-containing protein | - |
| JT17_RS00440 () | 83043..83486 | + | 444 | WP_005713568.1 | hypothetical protein | - |
| JT17_RS00445 () | 83607..84023 | + | 417 | WP_044008925.1 | hypothetical protein | - |
| JT17_RS12205 () | 84050..84202 | + | 153 | WP_005713570.1 | hypothetical protein | - |
| JT17_RS00450 () | 84195..86699 | + | 2505 | WP_044008926.1 | peptidoglycan-binding protein LysM | - |
| JT17_RS00460 () | 86881..87159 | - | 279 | WP_005713576.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JT17_RS00465 () | 87119..87364 | - | 246 | WP_005713578.1 | ribbon-helix-helix domain-containing protein | - |
| JT17_RS00470 () | 87590..88177 | + | 588 | Protein_96 | hypothetical protein | - |
| JT17_RS00475 () | 88285..88593 | + | 309 | WP_005713581.1 | hypothetical protein | - |
| JT17_RS00480 () | 88595..89482 | + | 888 | WP_005713583.1 | hypothetical protein | - |
| JT17_RS00485 () | 89493..90131 | + | 639 | WP_096334805.1 | phage baseplate protein | - |
| JT17_RS00490 () | 90135..90485 | + | 351 | WP_044008928.1 | hypothetical protein | - |
| JT17_RS00495 () | 90482..91669 | + | 1188 | WP_044008929.1 | baseplate J/gp47 family protein | - |
| JT17_RS00500 () | 91666..92283 | + | 618 | WP_005713594.1 | DUF2612 domain-containing protein | - |
| JT17_RS00510 () | 92754..94511 | + | 1758 | Protein_103 | tail fiber protein | - |
| JT17_RS00515 () | 94521..95087 | + | 567 | WP_044008930.1 | DUF4376 domain-containing protein | - |
| JT17_RS00520 () | 95080..95541 | + | 462 | WP_044008931.1 | hypothetical protein | - |
| JT17_RS00525 () | 95720..96019 | - | 300 | WP_044008932.1 | hypothetical protein | - |
| JT17_RS00530 () | 96016..96525 | - | 510 | WP_035491747.1 | MazG-like family protein | - |
| JT17_RS00535 () | 97042..98322 | - | 1281 | WP_005714408.1 | hypothetical protein | - |
| JT17_RS00540 () | 98443..98850 | - | 408 | WP_005714406.1 | hypothetical protein | - |
| JT17_RS00545 () | 98850..99044 | - | 195 | WP_005714404.1 | hypothetical protein | - |
| JT17_RS00550 () | 99210..99764 | - | 555 | WP_016527906.1 | DUF4760 domain-containing protein | - |
| JT17_RS00555 () | 99961..100758 | - | 798 | WP_035491750.1 | hypothetical protein | - |
| JT17_RS00560 () | 101148..101366 | + | 219 | WP_012621817.1 | hypothetical protein | - |
| JT17_RS00565 () | 101510..101773 | - | 264 | WP_035498484.1 | hypothetical protein | - |
| JT17_RS00570 () | 101797..102516 | - | 720 | WP_038513477.1 | hypothetical protein | - |
| JT17_RS00575 () | 102860..103048 | + | 189 | WP_010786201.1 | hypothetical protein | - |
| JT17_RS00580 () | 103090..103704 | - | 615 | WP_021109860.1 | YqaJ viral recombinase family protein | - |
| JT17_RS00585 () | 103701..104567 | - | 867 | WP_044008933.1 | phage recombination protein Bet | - |
| JT17_RS00590 () | 104577..105509 | - | 933 | WP_044008934.1 | hypothetical protein | - |
| JT17_RS12075 () | 105524..105661 | - | 138 | WP_157686060.1 | hypothetical protein | - |
| JT17_RS00595 () | 105648..106187 | - | 540 | WP_044008935.1 | hypothetical protein | - |
| JT17_RS00600 () | 106184..106504 | - | 321 | WP_021115189.1 | hypothetical protein | - |
| JT17_RS00605 () | 106587..107231 | - | 645 | WP_044008936.1 | antirepressor | - |
| JT17_RS00610 () | 107480..108193 | - | 714 | WP_016527556.1 | protein phosphatase 2C domain-containing protein | - |
| JT17_RS00615 () | 108198..108956 | - | 759 | WP_026916587.1 | Serine/threonine-protein kinase PknA | VF |
| JT17_RS00620 () | 109089..109730 | - | 642 | WP_044008937.1 | DUF3560 domain-containing protein | - |
| JT17_RS00630 () | 110148..110369 | - | 222 | WP_012621803.1 | hypothetical protein | - |
| JT17_RS00635 () | 110384..110569 | + | 186 | WP_020997221.1 | YegP family protein | - |
| JT17_RS11910 () | 110595..111038 | - | 444 | WP_157686061.1 | hypothetical protein | - |
| JT17_RS00645 () | 111404..111868 | - | 465 | WP_005714819.1 | hypothetical protein | - |
| JT17_RS00650 () | 111852..112799 | - | 948 | WP_005714821.1 | hypothetical protein | - |
| JT17_RS00655 () | 112839..113492 | - | 654 | WP_021110742.1 | LexA family transcriptional regulator | - |
| JT17_RS00660 () | 113628..113834 | + | 207 | WP_012621794.1 | helix-turn-helix transcriptional regulator | - |
| JT17_RS00665 () | 113855..114130 | + | 276 | WP_198355026.1 | hypothetical protein | - |
| JT17_RS00675 () | 114334..115224 | + | 891 | WP_026916583.1 | replication protein | - |
| JT17_RS00680 () | 115224..116579 | + | 1356 | WP_044008938.1 | AAA family ATPase | - |
| JT17_RS00685 () | 116657..117085 | + | 429 | WP_044008939.1 | recombination protein NinB | - |
| JT17_RS00690 () | 117082..117435 | + | 354 | WP_035490314.1 | hypothetical protein | - |
| JT17_RS00695 () | 117580..118149 | + | 570 | WP_044008940.1 | recombination protein NinG | - |
| JT17_RS00700 () | 118146..118523 | + | 378 | WP_044008941.1 | antitermination protein | - |
| JT17_RS00705 () | 118532..118750 | - | 219 | WP_005714782.1 | hypothetical protein | - |
| JT17_RS12210 () | 119047..119223 | + | 177 | WP_005714781.1 | hypothetical protein | - |
| JT17_RS00710 () | 119605..120168 | - | 564 | WP_005714778.1 | hypothetical protein | - |
| JT17_RS00715 () | 120282..120557 | + | 276 | WP_010786311.1 | hypothetical protein | - |
| JT17_RS00720 () | 120532..121077 | + | 546 | WP_026916880.1 | lysozyme | - |
| JT17_RS00725 () | 121050..121394 | + | 345 | WP_044008919.1 | DUF2570 family protein | - |
| JT17_RS12215 () | 121288..121572 | + | 285 | WP_198355024.1 | hypothetical protein | - |
| JT17_RS12220 () | 121798..121944 | + | 147 | WP_164681526.1 | hypothetical protein | - |
| JT17_RS00730 () | 121960..122412 | + | 453 | WP_044008942.1 | terminase small subunit | - |
| JT17_RS00735 () | 122396..123631 | + | 1236 | WP_044008943.1 | PBSX family phage terminase large subunit | - |
| JT17_RS00740 () | 123641..125038 | + | 1398 | WP_044008944.1 | DUF4055 domain-containing protein | - |
| JT17_RS11480 () | 124995..126779 | + | 1785 | WP_198355033.1 | minor capsid protein | - |
| JT17_RS00755 () | 127040..127561 | + | 522 | WP_005714627.1 | phage antirepressor N-terminal domain-containing protein | - |
| JT17_RS00760 () | 127686..128339 | + | 654 | Protein_154 | hypothetical protein | - |
| JT17_RS00765 () | 128456..129394 | + | 939 | WP_044008946.1 | Ig domain-containing protein | - |
| JT17_RS00770 () | 129764..130750 | - | 987 | WP_005714908.1 | IS110 family transposase ISCro4 | Transposase |
| JT17_RS00780 () | 131121..131582 | - | 462 | WP_044008948.1 | phage virion morphogenesis protein | - |
| JT17_RS00785 () | 131623..132057 | - | 435 | WP_005713956.1 | phage tail protein | - |
| JT17_RS00790 () | 132054..132272 | - | 219 | WP_005713957.1 | TraR/DksA family transcriptional regulator | - |
| JT17_RS00795 () | 132385..132804 | - | 420 | WP_005713958.1 | type II toxin-antitoxin system YafO family toxin | - |
| JT17_RS00800 () | 132801..132998 | - | 198 | WP_005713959.1 | hypothetical protein | - |
| JT17_RS00805 () | 133057..133251 | - | 195 | WP_005713960.1 | hypothetical protein | - |
| JT17_RS00810 () | 133460..133927 | - | 468 | WP_044008949.1 | hypothetical protein | - |
| JT17_RS00815 () | 133912..134436 | - | 525 | WP_038513807.1 | lysozyme | - |
| JT17_RS11485 () | 134420..134557 | - | 138 | WP_010786754.1 | hypothetical protein | - |
| JT17_RS00820 () | 134592..135245 | - | 654 | WP_012621779.1 | terminase | - |
| JT17_RS00825 () | 135245..135448 | - | 204 | WP_016528073.1 | hypothetical protein | - |
| JT17_RS12085 () | 135461..135604 | - | 144 | WP_157686063.1 | hypothetical protein | - |
| JT17_RS00830 () | 135643..136275 | - | 633 | WP_096334797.1 | GPO family capsid scaffolding protein | - |
| JT17_RS00835 () | 136443..136739 | + | 297 | WP_005713972.1 | helix-turn-helix domain-containing protein | - |
| JT17_RS11490 () | 136960..137704 | + | 745 | Protein_171 | transposase | - |
| JT17_RS00850 () | 137843..138812 | - | 970 | Protein_172 | transposase | - |
| JT17_RS00855 () | 138978..139163 | - | 186 | WP_005713975.1 | zf-HC2 domain-containing protein | - |
| JT17_RS00860 () | 139160..139732 | - | 573 | WP_005713976.1 | sigma-70 family RNA polymerase sigma factor | - |
| JT17_RS00865 () | 139874..140236 | + | 363 | WP_035494345.1 | hypothetical protein | - |
| JT17_RS00870 () | 140340..141410 | + | 1071 | WP_035491391.1 | peptide-methionine (R)-S-oxide reductase MsrB | - |
| JT17_RS11495 () | 141506..142367 | + | 862 | Protein_177 | IS256 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|