MGE detailed information
MGE type: Prophage MGE length: 31654 bp
Accession: NZ_CP009166 Location: 1787319..1818972 Organism: Escherichia coli 1303 Replicon: chromosome
Accession: NZ_CP009166 Location: 1787319..1818972 Organism: Escherichia coli 1303 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC1303_RS08630 () | 1783834..1784580 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| EC1303_RS08635 () | 1784669..1785355 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| EC1303_RS08640 () | 1785532..1785735 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EC1303_RS08645 () | 1785770..1787230 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| EC1303_RS08650 () | 1787319..1788602 | - | 1284 | Protein_1648 | MHS family MFS transporter YdfJ | - |
| EC1303_RS28800 () | 1789205..1789318 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| EC1303_RS08655 () | 1789387..1789620 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EC1303_RS08660 () | 1789937..1790527 | + | 591 | WP_000086531.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EC1303_RS08665 () | 1790625..1791200 | - | 576 | WP_000885634.1 | tail fiber assembly protein | - |
| EC1303_RS26460 () | 1791200..1794550 | - | 3351 | WP_071889255.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EC1303_RS26465 () | 1794604..1794699 | - | 96 | Protein_1654 | phage tail protein | - |
| EC1303_RS08690 () | 1794711..1795064 | - | 354 | WP_000753007.1 | head-tail joining protein | - |
| EC1303_RS08695 () | 1795076..1795474 | - | 399 | WP_023281240.1 | DNA-packaging protein FI | - |
| EC1303_RS08700 () | 1795516..1795992 | - | 477 | Protein_1657 | minor capsid protein E | - |
| EC1303_RS08705 () | 1795974..1797224 | - | 1251 | WP_072134963.1 | phage terminase large subunit family protein | - |
| EC1303_RS08710 () | 1797199..1797744 | - | 546 | WP_021575143.1 | DNA-packaging protein | - |
| EC1303_RS08715 () | 1798133..1798366 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| EC1303_RS08720 () | 1798424..1798834 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| EC1303_RS08725 () | 1798986..1799159 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| EC1303_RS08730 () | 1799331..1799486 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| EC1303_RS28805 () | 1799566..1799631 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| EC1303_RS26470 () | 1799634..1799822 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| EC1303_RS08735 () | 1799833..1800045 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EC1303_RS08740 () | 1800408..1800905 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| EC1303_RS08745 () | 1800902..1801435 | - | 534 | WP_001092971.1 | lysozyme | - |
| EC1303_RS08750 () | 1801432..1801743 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| EC1303_RS08755 () | 1801748..1801963 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EC1303_RS08760 () | 1802717..1802932 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EC1303_RS08765 () | 1803233..1803445 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EC1303_RS28810 () | 1803500..1803589 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| EC1303_RS08770 () | 1803867..1804619 | - | 753 | WP_001047135.1 | antitermination protein | - |
| EC1303_RS08775 () | 1804633..1805682 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| EC1303_RS08780 () | 1805684..1805962 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| EC1303_RS08785 () | 1806029..1806280 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| EC1303_RS08790 () | 1806497..1806652 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EC1303_RS08795 () | 1806724..1807011 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EC1303_RS08800 () | 1807011..1807250 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EC1303_RS26475 () | 1807275..1807580 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| EC1303_RS08805 () | 1807783..1808115 | + | 333 | WP_001301033.1 | protein FlxA | - |
| EC1303_RS08815 () | 1808573..1809735 | + | 1163 | WP_089566769.1 | IS3 family transposase ISEc17 | Transposase |
| EC1303_RS08820 () | 1809793..1811106 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| EC1303_RS29445 () | 1811875..1812162 | - | 288 | Protein_1685 | hypothetical protein | - |
| EC1303_RS08835 () | 1812773..1813084 | - | 312 | WP_001326992.1 | class I SAM-dependent methyltransferase | - |
| EC1303_RS08840 () | 1813186..1813374 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| EC1303_RS08845 () | 1813371..1813562 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| EC1303_RS08850 () | 1813655..1816126 | + | 2472 | WP_021570798.1 | exonuclease | - |
| EC1303_RS08855 () | 1816199..1816450 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| EC1303_RS08860 () | 1816485..1817765 | + | 1281 | WP_000876986.1 | Autoinducer 2 sensor kinase/phosphatase LuxQ ; Integrase | Integrase |
| EC1303_RS28160 () | 1817767..1817895 | - | 129 | WP_001389342.1 | hypothetical protein | - |
| EC1303_RS08865 () | 1817953..1818972 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| EC1303_RS08870 () | 1818984..1820198 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| EC1303_RS08875 () | 1820404..1820730 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| EC1303_RS08880 () | 1820865..1821206 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| EC1303_RS08885 () | 1821241..1821801 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| EC1303_RS08890 () | 1821804..1822514 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| EC1303_RS08895 () | 1822622..1822927 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|