MGE detailed information
MGE type: Prophage MGE length: 28690 bp
Accession: NZ_CP009158 Location: 535256..563945 Organism: Glaesserella parasuis strain SH03 Replicon: chromosome
Accession: NZ_CP009158 Location: 535256..563945 Organism: Glaesserella parasuis strain SH03 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JL26_RS02815 () | 532851..533234 | + | 384 | WP_012621846.1 | 30S ribosome-binding factor RbfA | - |
| JL26_RS02820 () | 533237..534154 | + | 918 | WP_038513794.1 | tRNA pseudouridine(55) synthase TruB | - |
| JL26_RS02825 () | 534164..535246 | + | 1083 | WP_026916886.1 | lytic murein transglycosylase | - |
| JL26_RS02830 () | 535256..536074 | + | 819 | WP_005713726.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | - |
| JL26_RS02840 () | 536462..537706 | + | 1245 | WP_038513797.1 | Prophage integrase IntA ; Integrase | Integrase |
| JL26_RS02845 () | 537695..537898 | - | 204 | WP_035491488.1 | hypothetical protein | - |
| JL26_RS11655 () | 537987..538589 | - | 603 | WP_080697474.1 | hypothetical protein | - |
| JL26_RS02855 () | 539016..539528 | + | 513 | WP_016528094.1 | hypothetical protein | - |
| JL26_RS02860 () | 539556..539735 | - | 180 | WP_035491485.1 | hypothetical protein | - |
| JL26_RS02865 () | 539737..540435 | + | 699 | WP_016528093.1 | DUF4145 domain-containing protein | - |
| JL26_RS02870 () | 540862..541083 | - | 222 | WP_016527867.1 | hypothetical protein | - |
| JL26_RS11660 () | 541098..541268 | + | 171 | WP_080716930.1 | DUF1508 domain-containing protein | - |
| JL26_RS11340 () | 541692..542369 | + | 678 | WP_157686078.1 | sce7726 family protein | - |
| JL26_RS02880 () | 542353..543462 | - | 1110 | WP_035491855.1 | beta family protein | - |
| JL26_RS02885 () | 543465..543830 | - | 366 | WP_016528090.1 | hypothetical protein | - |
| JL26_RS02890 () | 543836..544567 | - | 732 | WP_016528089.1 | helix-turn-helix transcriptional regulator | - |
| JL26_RS02895 () | 544702..544926 | + | 225 | WP_016528088.1 | helix-turn-helix domain-containing protein | - |
| JL26_RS02900 () | 544970..545152 | + | 183 | WP_016528087.1 | hypothetical protein | - |
| JL26_RS02905 () | 545130..546020 | + | 891 | WP_026916583.1 | replication protein | - |
| JL26_RS02910 () | 546020..547375 | + | 1356 | WP_026916582.1 | AAA family ATPase | - |
| JL26_RS02915 () | 547474..547902 | + | 429 | WP_038515080.1 | recombination protein NinB | - |
| JL26_RS02920 () | 547936..548349 | - | 414 | WP_005715065.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| JL26_RS02925 () | 548376..548558 | - | 183 | WP_005715063.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| JL26_RS12305 () | 548657..548833 | + | 177 | WP_016528082.1 | hypothetical protein | - |
| JL26_RS02930 () | 548805..549383 | + | 579 | WP_038513329.1 | recombination protein NinG | - |
| JL26_RS02935 () | 549373..549843 | + | 471 | WP_038513800.1 | antitermination protein | - |
| JL26_RS11665 () | 549895..550744 | + | 850 | Protein_587 | IS256 family transposase IS1414 | Transposase |
| JL26_RS02945 () | 550799..551107 | - | 309 | WP_131271302.1 | hypothetical protein | - |
| JL26_RS02950 () | 551144..551506 | - | 363 | WP_035492440.1 | DUF805 domain-containing protein | - |
| JL26_RS02955 () | 551640..552038 | + | 399 | WP_035492438.1 | helix-turn-helix transcriptional regulator | - |
| JL26_RS02960 () | 552087..552557 | - | 471 | Protein_591 | IS256 family transposase IS1414 | Transposase |
| JL26_RS02965 () | 553192..553614 | - | 423 | WP_016528078.1 | type II toxin-antitoxin system YafO family toxin | - |
| JL26_RS02970 () | 553607..554149 | - | 543 | WP_010786746.1 | hypothetical protein | - |
| JL26_RS02975 () | 554276..557018 | - | 2743 | Protein_594 | phage tail tape measure protein | - |
| JL26_RS02980 () | 557268..557729 | - | 462 | WP_005713954.1 | phage virion morphogenesis protein | - |
| JL26_RS02985 () | 557770..558204 | - | 435 | WP_035491384.1 | phage tail protein | - |
| JL26_RS02990 () | 558201..558419 | - | 219 | WP_010786750.1 | TraR/DksA family transcriptional regulator | - |
| JL26_RS02995 () | 558625..559143 | - | 519 | WP_012621781.1 | hypothetical protein | - |
| JL26_RS03000 () | 559326..559793 | - | 468 | WP_038513804.1 | hypothetical protein | - |
| JL26_RS03005 () | 559778..560302 | - | 525 | WP_038513807.1 | lysozyme | - |
| JL26_RS11670 () | 560286..560423 | - | 138 | WP_010786754.1 | hypothetical protein | - |
| JL26_RS03010 () | 560458..561111 | - | 654 | WP_012621779.1 | terminase | - |
| JL26_RS03015 () | 561111..561314 | - | 204 | WP_038513810.1 | hypothetical protein | - |
| JL26_RS03020 () | 561327..562142 | - | 816 | WP_038513813.1 | GPO family capsid scaffolding protein | - |
| JL26_RS03025 () | 562310..562606 | + | 297 | WP_051453330.1 | helix-turn-helix domain-containing protein | - |
| JL26_RS11675 () | 562827..563571 | + | 745 | Protein_606 | transposase | - |
| JL26_RS03040 () | 563760..563945 | - | 186 | WP_005713975.1 | zf-HC2 domain-containing protein | - |
| JL26_RS03045 () | 563942..564514 | - | 573 | WP_005713976.1 | sigma-70 family RNA polymerase sigma factor | - |
| JL26_RS03050 () | 564656..564952 | + | 297 | WP_038513818.1 | hypothetical protein | - |
| JL26_RS03055 () | 565056..566126 | + | 1071 | WP_035491391.1 | peptide-methionine (R)-S-oxide reductase MsrB | - |
| JL26_RS03060 () | 566128..566778 | + | 651 | WP_035491394.1 | cytochrome c biogenesis protein CcdA | - |
| JL26_RS03065 () | 566796..567275 | + | 480 | WP_010786761.1 | redoxin family protein | - |
| JL26_RS03070 () | 567444..567756 | - | 313 | Protein_613 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|