MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 32444 bp
Accession: NZ_CP009126 Location: 1..32444 Organism: Pectobacterium atrosepticum strain 21A Replicon: plasmid pPA21A
Accession: NZ_CP009126 Location: 1..32444 Organism: Pectobacterium atrosepticum strain 21A Replicon: plasmid pPA21A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZ59_RS22215 () | 659..904 | - | 246 | WP_040118333.1 | hypothetical protein | - |
| GZ59_RS22220 () | 987..1640 | - | 654 | WP_040118334.1 | ATPase | - |
| GZ59_RS22225 () | 2038..2322 | - | 285 | WP_040118335.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GZ59_RS22230 () | 2315..2557 | - | 243 | WP_008815935.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| GZ59_RS22235 () | 3130..4047 | - | 918 | WP_050880439.1 | replication initiator protein RepA | - |
| GZ59_RS22240 () | 4555..4917 | - | 363 | WP_040118336.1 | helix-turn-helix domain-containing protein | - |
| GZ59_RS22245 () | 5188..5643 | + | 456 | WP_040118337.1 | transcriptional antiterminator NusG | - |
| GZ59_RS22250 () | 5723..5947 | + | 225 | WP_040118338.1 | hypothetical protein | - |
| GZ59_RS22255 () | 5968..6636 | + | 669 | WP_040118339.1 | Type IV secretion system protein virB1 | VF |
| GZ59_RS22260 () | 6646..6939 | + | 294 | WP_040118340.1 | Type IV secretion system protein virB2 | VF |
| GZ59_RS22265 () | 6949..9696 | + | 2748 | WP_040118341.1 | Type IV secretion system protein virB4 | VF |
| GZ59_RS22270 () | 9708..10430 | + | 723 | WP_040118342.1 | type IV secretion system protein | - |
| GZ59_RS22275 () | 10445..10735 | + | 291 | WP_040118343.1 | EexN family lipoprotein | - |
| GZ59_RS22280 () | 10732..11733 | + | 1002 | WP_040118344.1 | type IV secretion system protein | - |
| GZ59_RS22285 () | 11933..12616 | + | 684 | WP_040118345.1 | Type IV secretion system protein PtlE | VF |
| GZ59_RS22290 () | 12616..13512 | + | 897 | WP_032490881.1 | Type IV secretion system protein virB9 | VF |
| GZ59_RS22295 () | 13509..14789 | + | 1281 | WP_040118347.1 | Type IV secretion system protein virB10 | VF |
| GZ59_RS22300 () | 14800..15828 | + | 1029 | WP_040118348.1 | Type IV secretion system protein VirB11 | VF |
| GZ59_RS22305 () | 15815..16219 | + | 405 | WP_040118349.1 | hypothetical protein | - |
| GZ59_RS22310 () | 16323..16628 | + | 306 | WP_040118350.1 | conjugal transfer protein | - |
| GZ59_RS22315 () | 16631..18853 | + | 2223 | WP_040118351.1 | type IA DNA topoisomerase | - |
| GZ59_RS22320 () | 18915..19358 | + | 444 | WP_051918076.1 | H-NS histone family protein | - |
| GZ59_RS22325 () | 20308..22143 | + | 1836 | WP_051918077.1 | TraM recognition domain-containing protein | - |
| GZ59_RS22330 () | 22153..22899 | + | 747 | WP_040118352.1 | hypothetical protein | Relaxase |
| GZ59_RS22335 () | 22892..23413 | + | 522 | WP_040118353.1 | phospholipase D family protein | - |
| GZ59_RS22340 () | 23458..24192 | - | 735 | WP_040118354.1 | hypothetical protein | - |
| GZ59_RS22345 () | 24801..25751 | - | 951 | WP_040118355.1 | DUF1738 domain-containing protein | - |
| GZ59_RS22350 () | 26122..26841 | + | 720 | WP_040118356.1 | hypothetical protein | - |
| GZ59_RS22355 () | 27044..28573 | - | 1530 | WP_050880444.1 | SIR2 family protein | - |
| GZ59_RS22360 () | 28783..29203 | - | 421 | Protein_30 | hypothetical protein | - |
| GZ59_RS22365 () | 29300..29785 | - | 486 | WP_051918079.1 | type III toxin-antitoxin system ToxN/AbiQ family toxin | - |
| GZ59_RS22375 () | 30879..31856 | + | 978 | WP_040118358.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|