MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 76845 bp
Accession: NZ_CP009125 Location: 794178..871022 Organism: Pectobacterium atrosepticum strain 21A Replicon: chromosome
Accession: NZ_CP009125 Location: 794178..871022 Organism: Pectobacterium atrosepticum strain 21A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZ59_RS03510 () | 789899..791179 | + | 1281 | WP_039290114.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| GZ59_RS03515 () | 791242..792333 | - | 1092 | WP_039290116.1 | L,D-transpeptidase family protein | - |
| GZ59_RS03520 () | 792515..793312 | - | 798 | WP_039290119.1 | deaminated glutathione amidase | - |
| GZ59_RS03525 () | 793334..793870 | - | 537 | WP_011092428.1 | cytochrome b561 | - |
| GZ59_RS03530 () | 794144..797677 | - | 3534 | WP_039290122.1 | pyruvate:ferredoxin (flavodoxin) oxidoreductase | - |
| GZ59_RS03535 () | 798067..798492 | + | 426 | WP_011092430.1 | hypothetical protein | - |
| GZ59_RS03540 () | 798852..799349 | + | 498 | WP_039290125.1 | GNAT family N-acetyltransferase | - |
| GZ59_RS03545 () | 799393..800019 | - | 627 | WP_011092432.1 | LysE family transporter | - |
| GZ59_RS03550 () | 800216..800998 | - | 783 | WP_011092433.1 | ABC transporter substrate-binding protein | - |
| GZ59_RS03565 () | 802622..803083 | - | 462 | Protein_689 | hypothetical protein | - |
| GZ59_RS22395 () | 803938..804570 | - | 633 | WP_158296417.1 | transglycosylase domain-containing protein | - |
| GZ59_RS23645 () | 804507..805127 | - | 621 | WP_158296418.1 | hypothetical protein | - |
| GZ59_RS23235 () | 805430..805809 | - | 380 | Protein_692 | winged helix-turn-helix domain-containing protein | - |
| GZ59_RS03580 () | 806233..806778 | + | 546 | WP_039282029.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| GZ59_RS03585 () | 806762..806962 | + | 201 | Protein_694 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| GZ59_RS03590 () | 807290..807574 | - | 285 | WP_039290137.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GZ59_RS03595 () | 807564..807815 | - | 252 | WP_005973616.1 | prevent-host-death protein | Antitoxin Detail |
| GZ59_RS03600 () | 808075..810402 | - | 2328 | WP_039290139.1 | toprim domain-containing protein | - |
| GZ59_RS03605 () | 810413..810754 | - | 342 | WP_039290142.1 | DUF5375 family protein | - |
| GZ59_RS03610 () | 810751..811017 | - | 267 | WP_039290145.1 | hypothetical protein | - |
| GZ59_RS03615 () | 811014..811208 | - | 195 | WP_039294697.1 | hypothetical protein | - |
| GZ59_RS23395 () | 811201..811398 | - | 198 | WP_039294701.1 | host cell division inhibitor Icd-like protein | - |
| GZ59_RS22585 () | 811377..811745 | - | 369 | Protein_702 | ash family protein | - |
| GZ59_RS03630 () | 811754..811978 | - | 225 | WP_039281995.1 | hypothetical protein | - |
| GZ59_RS03635 () | 811975..812235 | - | 261 | WP_039290147.1 | AlpA family transcriptional regulator | - |
| GZ59_RS03640 () | 812782..813543 | + | 762 | WP_039290148.1 | hypothetical protein | - |
| GZ59_RS22590 () | 813540..813788 | + | 249 | WP_071598516.1 | ogr/Delta-like zinc finger family protein | - |
| GZ59_RS03645 () | 814182..815570 | + | 1389 | WP_039290149.1 | hypothetical protein | - |
| GZ59_RS03650 () | 815644..816831 | - | 1188 | WP_039290150.1 | hypothetical protein ; Integrase | Integrase |
| GZ59_RS03655 () | 817574..817777 | + | 204 | WP_039290153.1 | AlpA family transcriptional regulator | - |
| GZ59_RS03660 () | 818696..819073 | - | 378 | WP_039290156.1 | hypothetical protein | - |
| GZ59_RS03665 () | 819110..819604 | - | 495 | WP_039290165.1 | DUF4755 domain-containing protein | - |
| GZ59_RS22400 () | 819967..821268 | - | 1302 | WP_051122315.1 | MobA/MobL family protein | - |
| GZ59_RS03675 () | 821609..821794 | + | 186 | WP_023214638.1 | hypothetical protein | - |
| GZ59_RS03680 () | 821791..822126 | + | 336 | WP_039290170.1 | hypothetical protein | - |
| GZ59_RS03685 () | 822116..822466 | + | 351 | WP_039290172.1 | hypothetical protein | - |
| GZ59_RS03690 () | 822459..822869 | + | 411 | WP_039290174.1 | hypothetical protein | - |
| GZ59_RS03695 () | 822866..823102 | + | 237 | WP_001528703.1 | hypothetical protein | - |
| GZ59_RS03700 () | 823104..823568 | + | 465 | WP_039290178.1 | hypothetical protein | - |
| GZ59_RS03705 () | 823770..825515 | - | 1746 | WP_039290181.1 | hypothetical protein | - |
| GZ59_RS03710 () | 825592..826821 | - | 1230 | WP_039290184.1 | hypothetical protein ; Integrase | Integrase |
| GZ59_RS03715 () | 827399..827881 | - | 483 | WP_011092441.1 | SsrA-binding protein SmpB | - |
| GZ59_RS03720 () | 828037..828483 | + | 447 | WP_039290192.1 | type II toxin-antitoxin system RatA family toxin | - |
| GZ59_RS03725 () | 828464..828754 | + | 291 | WP_039290195.1 | RnfH family protein | - |
| GZ59_RS03730 () | 828992..829327 | - | 336 | WP_011092444.1 | outer membrane protein assembly factor BamE | - |
| GZ59_RS03735 () | 829482..831143 | - | 1662 | WP_039290198.1 | hypothetical protein | VF |
| GZ59_RS03740 () | 831223..832101 | - | 879 | WP_011092446.1 | NAD(+) kinase | - |
| GZ59_RS03745 () | 832250..832837 | + | 588 | WP_039290202.1 | nucleotide exchange factor GrpE | - |
| GZ59_RS03750 () | 833274..834506 | + | 1233 | WP_011092448.1 | Nramp family divalent metal transporter | - |
| GZ59_RS03755 () | 834538..834741 | - | 204 | WP_010282462.1 | 4-oxalocrotonate tautomerase family protein | - |
| GZ59_RS03760 () | 834755..835921 | - | 1167 | WP_039290208.1 | MFS transporter | - |
| GZ59_RS03765 () | 836120..837217 | - | 1098 | WP_011092450.1 | glycerol dehydrogenase | - |
| GZ59_RS03770 () | 837595..838176 | + | 582 | WP_011092451.1 | GDP-mannose pyrophosphatase NudK | - |
| GZ59_RS03775 () | 838571..839836 | + | 1266 | WP_039290211.1 | extracellular solute-binding protein | - |
| GZ59_RS03780 () | 839900..840781 | + | 882 | WP_039290214.1 | sugar ABC transporter permease | - |
| GZ59_RS03785 () | 840783..841595 | + | 813 | WP_039290217.1 | carbohydrate ABC transporter permease | - |
| GZ59_RS03790 () | 841632..842717 | + | 1086 | WP_039290221.1 | Carboxynorspermidine synthase | VF |
| GZ59_RS03795 () | 843066..844589 | + | 1524 | WP_039290224.1 | glycosyl hydrolase 53 family protein | - |
| GZ59_RS03800 () | 844708..845739 | - | 1032 | WP_011092457.1 | LacI family DNA-binding transcriptional regulator | - |
| GZ59_RS03805 () | 845876..846637 | - | 762 | WP_039290228.1 | Ferrichrome outer membrane transporter/phage receptor | VF |
| GZ59_RS03810 () | 846712..847656 | - | 945 | WP_039290231.1 | amino acid ABC transporter permease | - |
| GZ59_RS03815 () | 847653..848549 | - | 897 | WP_039290234.1 | ABC transporter substrate-binding protein | - |
| GZ59_RS03820 () | 848961..849809 | - | 849 | WP_080641362.1 | PRD domain-containing protein | - |
| GZ59_RS03825 () | 849958..851385 | - | 1428 | WP_039290236.1 | glycoside hydrolase family 1 protein | - |
| GZ59_RS03830 () | 851451..853370 | - | 1920 | WP_039294713.1 | beta-glucoside-specific PTS transporter subunit IIABC | - |
| GZ59_RS03840 () | 853687..855681 | - | 1995 | WP_039290242.1 | transketolase | - |
| GZ59_RS03845 () | 855697..856647 | - | 951 | WP_011092465.1 | transaldolase | - |
| GZ59_RS03850 () | 856846..857304 | - | 459 | WP_039290245.1 | ribose 5-phosphate isomerase B | - |
| GZ59_RS03860 () | 857848..859230 | + | 1383 | WP_039290251.1 | MFS transporter | - |
| GZ59_RS03865 () | 859232..861004 | + | 1773 | WP_039290254.1 | dihydroxyacetone kinase family protein | - |
| GZ59_RS03870 () | 861001..861780 | + | 780 | WP_039290257.1 | triose-phosphate isomerase | - |
| GZ59_RS03875 () | 861797..862624 | + | 828 | WP_039290260.1 | sugar phosphate isomerase/epimerase | - |
| GZ59_RS03880 () | 862652..863509 | + | 858 | WP_011092472.1 | oxidoreductase | - |
| GZ59_RS03885 () | 863709..864671 | + | 963 | WP_011092473.1 | sugar-binding transcriptional regulator | - |
| GZ59_RS03890 () | 864926..867205 | + | 2280 | WP_039290262.1 | NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase | - |
| GZ59_RS03895 () | 867603..868877 | + | 1275 | WP_039290264.1 | tryptophan permease | - |
| GZ59_RS03900 () | 868956..869408 | - | 453 | WP_039290266.1 | YaiI/YqxD family protein | - |
| GZ59_RS03905 () | 869412..870344 | - | 933 | WP_039290268.1 | oxygen-dependent coproporphyrinogen oxidase | - |
| GZ59_RS03910 () | 870526..870951 | + | 426 | WP_011092478.1 | GNAT family acetyltransferase | - |
| GZ59_RS03915 () | 871058..873256 | - | 2199 | WP_039290271.1 | TonB-dependent receptor | - |
| GZ59_RS03920 () | 873907..874869 | + | 963 | WP_039290274.1 | TonB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|