MGE detailed information
MGE type: Conjugative plasmid MGE length: 161447 bp
Accession: NZ_CP009107 Location: 1..161447 Organism: Escherichia coli strain 94-3024 Replicon: plasmid pO104_H21
Accession: NZ_CP009107 Location: 1..161447 Organism: Escherichia coli strain 94-3024 Replicon: plasmid pO104_H21
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW43_RS24140 () | 1..572 | + | 572 | Protein_0 | type 4b pilus protein PilO2 | - |
| HW43_RS24145 () | 624..1019 | + | 396 | WP_048264131.1 | type IV pilus biogenesis protein PilP | - |
| HW43_RS24150 () | 1104..2611 | + | 1508 | Protein_2 | Toxin coregulated pilus biosynthesis protein T | VF |
| HW43_RS24155 () | 2613..3713 | + | 1101 | WP_021292782.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HW43_RS24160 () | 3787..4323 | + | 537 | WP_040118365.1 | cleavage protein | - |
| HW43_RS24165 () | 4377..4850 | + | 474 | WP_000870986.1 | hypothetical protein | VF |
| HW43_RS24170 () | 4869..5501 | + | 633 | WP_021292783.1 | prepilin peptidase | - |
| HW43_RS24175 () | 5506..6870 | + | 1365 | WP_021292784.1 | hypothetical protein | VF |
| HW43_RS24180 () | 7328..7618 | + | 291 | WP_021292787.1 | hypothetical protein | - |
| HW43_RS24185 () | 7710..8030 | - | 321 | WP_021292788.1 | hypothetical protein | - |
| HW43_RS24190 () | 8290..9111 | + | 822 | WP_021292789.1 | hypothetical protein | - |
| HW43_RS24195 () | 9201..10403 | + | 1203 | WP_021292790.1 | conjugal transfer protein TraF | - |
| HW43_RS28135 () | 10543..10713 | + | 171 | WP_021292791.1 | hypothetical protein | - |
| HW43_RS24200 () | 10762..11214 | + | 453 | WP_001081199.1 | DotD/TraH family lipoprotein | - |
| HW43_RS24205 () | 11211..12047 | + | 837 | WP_000848138.1 | hypothetical protein | VF |
| HW43_RS24210 () | 12031..13179 | + | 1149 | WP_021292792.1 | putative protein YggR | VF |
| HW43_RS24215 () | 13176..13466 | + | 291 | WP_000817799.1 | hypothetical protein | - |
| HW43_RS24220 () | 13530..17552 | + | 4023 | WP_021292793.1 | DNA primase | - |
| HW43_RS24225 () | 17569..17919 | + | 351 | WP_001056369.1 | hypothetical protein | - |
| HW43_RS24230 () | 17931..18626 | + | 696 | WP_001287263.1 | DotI/IcmL family type IV secretion protein | - |
| HW43_RS24235 () | 18637..19611 | + | 975 | WP_001165564.1 | hypothetical protein | VF |
| HW43_RS24240 () | 19615..20946 | + | 1332 | WP_021292795.1 | conjugal transfer protein TraO | - |
| HW43_RS24245 () | 20943..21656 | + | 714 | WP_021292796.1 | conjugal transfer protein TraP | - |
| HW43_RS24250 () | 21656..22183 | + | 528 | WP_001379391.1 | conjugal transfer protein TraQ | - |
| HW43_RS24255 () | 22230..22628 | + | 399 | WP_021293311.1 | hypothetical protein | - |
| HW43_RS24260 () | 22685..22936 | + | 252 | WP_021292797.1 | hypothetical protein | - |
| HW43_RS24265 () | 22851..23669 | + | 819 | WP_148935988.1 | conjugal transfer protein TraT | - |
| HW43_RS24270 () | 23724..24083 | + | 360 | WP_000380400.1 | hypothetical protein | - |
| HW43_RS24275 () | 24083..24463 | + | 381 | WP_021292799.1 | hypothetical protein | - |
| HW43_RS24280 () | 24639..27683 | + | 3045 | WP_001024758.1 | conjugal transfer protein | - |
| HW43_RS24285 () | 27683..28300 | + | 618 | WP_000286857.1 | hypothetical protein | - |
| HW43_RS24290 () | 28261..29466 | + | 1206 | WP_021293310.1 | conjugal transfer protein TraW | - |
| HW43_RS24295 () | 29463..30031 | + | 569 | Protein_32 | conjugal transfer protein TraX | - |
| HW43_RS24300 () | 30104..32263 | + | 2160 | WP_040118366.1 | DotA/TraY family protein | - |
| HW43_RS24305 () | 32345..32992 | + | 648 | WP_001563237.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HW43_RS24310 () | 33148..33309 | + | 162 | WP_001138649.1 | hypothetical protein | - |
| HW43_RS24315 () | 33306..33458 | - | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| HW43_RS24320 () | 33792..34034 | + | 243 | WP_000064387.1 | hypothetical protein | - |
| HW43_RS24325 () | 34127..35662 | - | 1536 | WP_001367813.1 | phosphoethanolamine transferase | - |
| HW43_RS24330 () | 35862..36317 | - | 456 | WP_021292801.1 | DUF2569 family protein | - |
| HW43_RS24335 () | 36405..37028 | - | 624 | WP_001158019.1 | hypothetical protein | - |
| HW43_RS24340 () | 37177..37680 | + | 504 | WP_021293322.1 | thermonuclease family protein | - |
| HW43_RS24345 () | 38043..42122 | + | 4080 | WP_040118367.1 | Serine protease SepA autotransporter | VF |
| HW43_RS26670 () | 42284..42493 | - | 210 | WP_000855713.1 | hypothetical protein | - |
| HW43_RS24355 () | 42627..42992 | + | 366 | WP_040118368.1 | hypothetical protein | - |
| HW43_RS24360 () | 43002..43193 | + | 192 | WP_000264909.1 | hypothetical protein | - |
| HW43_RS24365 () | 43224..43535 | + | 312 | WP_029365223.1 | hypothetical protein | - |
| HW43_RS24375 () | 44310..45635 | + | 1326 | WP_040118369.1 | IncI1-type conjugal transfer protein TrbA | - |
| HW43_RS24380 () | 45632..46750 | + | 1119 | WP_001597028.1 | DsbC family protein | - |
| HW43_RS24385 () | 46731..49034 | + | 2304 | WP_000077655.1 | TraM recognition domain-containing protein | - |
| HW43_RS24390 () | 49160..49462 | + | 303 | WP_000334995.1 | hypothetical protein | - |
| HW43_RS24395 () | 49560..49991 | - | 432 | WP_001335086.1 | hypothetical protein | - |
| HW43_RS24400 () | 50059..52770 | - | 2712 | WP_011310099.1 | Protein TraI | Relaxase |
| HW43_RS24405 () | 52782..53114 | - | 333 | WP_001291058.1 | hypothetical protein | - |
| HW43_RS24410 () | 53347..53682 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| HW43_RS24415 () | 53768..54616 | - | 849 | WP_021292934.1 | DUF4942 domain-containing protein | - |
| HW43_RS28140 () | 55033..55353 | - | 321 | WP_021292935.1 | hypothetical protein | - |
| HW43_RS24425 () | 55350..55541 | - | 192 | WP_021292936.1 | hypothetical protein | - |
| HW43_RS24430 () | 55541..55960 | - | 420 | WP_000271737.1 | DUF1380 family protein | - |
| HW43_RS24435 () | 56007..56309 | - | 303 | WP_077776154.1 | antirestriction protein | - |
| HW43_RS24445 () | 56847..57623 | - | 777 | WP_024177483.1 | hypothetical protein | - |
| HW43_RS24450 () | 57674..58108 | - | 435 | WP_000274460.1 | DUF1380 family protein | - |
| HW43_RS24455 () | 58122..58343 | - | 222 | WP_001104895.1 | hypothetical protein | - |
| HW43_RS24460 () | 58344..59027 | - | 684 | WP_000086114.1 | DNA methylase | - |
| HW43_RS24465 () | 59308..60327 | - | 1020 | WP_000878014.1 | IS110 family transposase ISEc11 | Transposase |
| HW43_RS27365 () | 60543..60855 | - | 313 | Protein_65 | hypothetical protein | - |
| HW43_RS24475 () | 60852..61754 | - | 903 | WP_077629773.1 | DUF1281 domain-containing protein | - |
| HW43_RS24480 () | 62030..62278 | + | 249 | WP_000618108.1 | DinI-like family protein | - |
| HW43_RS24485 () | 62275..62712 | + | 438 | WP_021293182.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HW43_RS24490 () | 62712..63982 | + | 1271 | Protein_69 | Y-family DNA polymerase | - |
| HW43_RS24495 () | 64162..64788 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| HW43_RS28145 () | 64785..65087 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| HW43_RS24510 () | 65476..65727 | + | 252 | WP_031322317.1 | hypothetical protein | - |
| HW43_RS24515 () | 65727..66317 | + | 591 | WP_000194574.1 | hypothetical protein | - |
| HW43_RS24520 () | 66337..66684 | - | 348 | WP_000142449.1 | hypothetical protein | - |
| HW43_RS24525 () | 66803..67150 | + | 348 | WP_000762580.1 | hypothetical protein | - |
| HW43_RS24530 () | 67168..69048 | - | 1881 | WP_001283354.1 | colicin | - |
| HW43_RS27380 () | 69327..69992 | - | 666 | WP_000448923.1 | hypothetical protein | - |
| HW43_RS24540 () | 70015..70224 | - | 210 | Protein_78 | IS21 family transposase IS21 | Transposase |
| HW43_RS24550 () | 70721..72694 | + | 1974 | WP_024199761.1 | Hemin receptor | VF |
| HW43_RS24555 () | 72713..73504 | + | 792 | WP_000977390.1 | DUF4198 domain-containing protein | - |
| HW43_RS24560 () | 74009..74434 | + | 426 | WP_021293190.1 | IS66 family transposase ISEc23 | Transposase |
| HW43_RS24565 () | 74431..74781 | + | 351 | WP_000624677.1 | IS66 family transposase IS682 | Transposase |
| HW43_RS24570 () | 74812..76404 | + | 1593 | WP_040118371.1 | IS66 family transposase ISEc47 | Transposase |
| HW43_RS26690 () | 76434..76607 | + | 174 | Protein_84 | DUF4113 domain-containing protein | - |
| HW43_RS24575 () | 76609..77025 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| HW43_RS24580 () | 77018..77998 | - | 981 | WP_000688510.1 | plasmid segregation protein ParM | - |
| HW43_RS24585 () | 78413..78721 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| HW43_RS24590 () | 78808..79452 | - | 645 | WP_001144036.1 | ParA family protein | - |
| HW43_RS24595 () | 79633..80439 | - | 807 | WP_000016966.1 | site-specific integrase | - |
| HW43_RS24600 () | 80440..80745 | - | 306 | WP_021293254.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HW43_RS24605 () | 80747..80965 | - | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HW43_RS24615 () | 81561..81821 | + | 261 | WP_000343102.1 | hypothetical protein | - |
| HW43_RS24620 () | 81818..82408 | + | 591 | WP_021293255.1 | hypothetical protein | - |
| HW43_RS24625 () | 82426..82773 | - | 348 | WP_033817147.1 | hypothetical protein | - |
| HW43_RS24630 () | 82902..83237 | + | 336 | WP_021292998.1 | colicin transporter | - |
| HW43_RS24635 () | 83244..83614 | - | 371 | Protein_96 | colicin | - |
| HW43_RS24640 () | 83674..84405 | - | 732 | WP_000850413.1 | complement resistance protein TraT | - |
| HW43_RS28150 () | 84682..84792 | - | 111 | Protein_98 | IS481 family transposase | - |
| HW43_RS26700 () | 84796..85010 | - | 215 | Protein_99 | hypothetical protein | - |
| HW43_RS24650 () | 85576..86553 | + | 978 | WP_024199652.1 | RepB family plasmid replication initiator protein | - |
| HW43_RS24655 () | 86781..87063 | - | 283 | Protein_101 | ISL3 family transposase ISEc53 | Transposase |
| HW43_RS27390 () | 87220..87450 | - | 231 | WP_040118372.1 | hypothetical protein | - |
| HW43_RS24675 () | 88904..89398 | - | 495 | WP_021293003.1 | Transcriptional repressor MprA | VF |
| HW43_RS24680 () | 89519..90958 | - | 1440 | WP_021293303.1 | Hemolysin secretion protein D, chromosomal | VF |
| HW43_RS24685 () | 90962..93082 | - | 2121 | WP_072094473.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| HW43_RS24690 () | 93132..96128 | - | 2997 | WP_021293304.1 | Hemolysin, chromosomal | VF |
| HW43_RS24695 () | 96130..96645 | - | 516 | WP_001365635.1 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| HW43_RS24705 () | 97073..97876 | - | 804 | WP_040118373.1 | Outer membrane protein A | VF |
| HW43_RS24710 () | 97901..102229 | - | 4329 | WP_024199654.1 | Autotransporter adhesin SadA | VF |
| HW43_RS26710 () | 102246..102527 | - | 282 | WP_040118374.1 | Major pilu subunit operon regulatory protein PapB | VF |
| HW43_RS24715 () | 103623..105179 | + | 1557 | WP_040118375.1 | L-lactate permease | - |
| HW43_RS24720 () | 105230..105949 | + | 720 | WP_001102093.1 | (Fe-S)-binding protein | - |
| HW43_RS24725 () | 105960..107375 | + | 1416 | WP_000054160.1 | iron-sulfur cluster-binding protein | - |
| HW43_RS24730 () | 107380..108078 | + | 699 | WP_021293086.1 | lactate utilization protein C | - |
| HW43_RS24735 () | 108422..108886 | - | 465 | WP_077787444.1 | IS3 family transposase ISEcB1 | Transposase |
| HW43_RS24740 () | 109002..109313 | - | 312 | WP_000203483.1 | hypothetical protein | - |
| HW43_RS24745 () | 109341..109532 | - | 192 | WP_000264906.1 | hypothetical protein | - |
| HW43_RS24750 () | 109542..109907 | - | 366 | WP_001379349.1 | hypothetical protein | - |
| HW43_RS26725 () | 110041..110250 | + | 210 | WP_000855713.1 | hypothetical protein | - |
| HW43_RS24755 () | 110412..114314 | - | 3903 | WP_040118376.1 | Serine protease EspP | VF |
| HW43_RS24760 () | 114694..115197 | - | 504 | WP_021293446.1 | thermonuclease family protein | - |
| HW43_RS24765 () | 115356..116033 | + | 678 | Protein_123 | DNA-binding protein | - |
| HW43_RS26735 () | 116523..116843 | - | 321 | WP_000220092.1 | hypothetical protein | - |
| HW43_RS28155 () | 118146..118295 | - | 150 | WP_000539306.1 | hypothetical protein | - |
| HW43_RS24790 () | 118561..119943 | - | 1383 | WP_021293450.1 | autoagglutinating adhesin Saa | - |
| HW43_RS27970 () | 120197..120286 | + | 90 | Protein_128 | transposase | - |
| HW43_RS24800 () | 120353..121515 | + | 1163 | WP_096780418.1 | IS3 family transposase IS3 | Transposase |
| HW43_RS26740 () | 121860..122039 | + | 180 | Protein_130 | IS3 family transposase | - |
| HW43_RS24810 () | 122347..124434 | + | 2088 | WP_001223214.1 | bifunctional siderophore receptor/adhesin Iha | - |
| HW43_RS24815 () | 124695..125117 | - | 423 | WP_001212725.1 | Exc2 family lipoprotein | - |
| HW43_RS24820 () | 125601..126026 | + | 426 | WP_021293190.1 | IS66 family transposase ISEc23 | Transposase |
| HW43_RS24825 () | 126023..126373 | + | 351 | WP_000624677.1 | IS66 family transposase IS682 | Transposase |
| HW43_RS24830 () | 126404..127996 | + | 1593 | WP_040118371.1 | IS66 family transposase ISEc47 | Transposase |
| HW43_RS27975 () | 128028..128153 | - | 126 | Protein_136 | IS110 family transposase | - |
| HW43_RS24835 () | 128215..128403 | + | 189 | Protein_137 | IS66 family transposase ISEc47 | Transposase |
| HW43_RS26750 () | 128687..129112 | - | 426 | WP_001373081.1 | subtilase AB5 cytotoxin subunit B | - |
| HW43_RS24845 () | 129129..130172 | - | 1044 | WP_000912970.1 | subtilase AB5 cytotoxin subunit A | - |
| HW43_RS27395 () | 130226..131190 | - | 965 | Protein_140 | transposase | - |
| HW43_RS24860 () | 131221..131569 | - | 349 | Protein_141 | IS66 family transposase IS682 | Transposase |
| HW43_RS24865 () | 131566..131991 | - | 426 | WP_021293235.1 | IS66 family transposase IS682 | Transposase |
| HW43_RS26760 () | 132296..132481 | - | 186 | WP_071531845.1 | hypothetical protein | - |
| HW43_RS24870 () | 132481..133779 | - | 1299 | Protein_144 | VENN motif pre-toxin domain-containing protein | - |
| HW43_RS27985 () | 134036..134209 | + | 174 | Protein_145 | Tn3 family transposase | - |
| HW43_RS24880 () | 134406..135399 | + | 994 | Protein_146 | IS110 family transposase IS5075 | Transposase |
| HW43_RS24885 () | 135828..136088 | - | 261 | WP_000038919.1 | hypothetical protein | - |
| HW43_RS24890 () | 136708..145521 | - | 8814 | Protein_148 | tRNA nuclease CdiA | VF |
| HW43_RS24895 () | 145534..147300 | - | 1767 | WP_021292772.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| HW43_RS24900 () | 147915..148154 | - | 240 | WP_000859017.1 | MarR family transcriptional regulator | - |
| HW43_RS28240 () | 148167..148426 | - | 260 | Protein_151 | hypothetical protein | - |
| HW43_RS24910 () | 149118..149990 | - | 873 | WP_021292773.1 | incFII family plasmid replication initiator RepA | - |
| HW43_RS24915 () | 150693..151334 | + | 642 | WP_000335842.1 | transcription termination factor NusG | - |
| HW43_RS24920 () | 151475..152140 | + | 666 | WP_021292774.1 | hypothetical protein | - |
| HW43_RS24925 () | 152407..153027 | + | 621 | WP_000176497.1 | DUF1449 family protein | - |
| HW43_RS24930 () | 153054..154748 | + | 1695 | WP_000482663.1 | flotillin family protein | - |
| HW43_RS26795 () | 154829..155071 | + | 243 | WP_001271734.1 | PilI type IV pilus biogenesis protein | - |
| HW43_RS24935 () | 155187..155522 | + | 336 | WP_024199660.1 | hypothetical protein | - |
| HW43_RS24950 () | 156129..157016 | + | 888 | WP_024199659.1 | hypothetical protein | - |
| HW43_RS24955 () | 157009..157449 | - | 441 | WP_021292779.1 | hypothetical protein | - |
| HW43_RS24960 () | 157552..158619 | + | 1068 | WP_021293313.1 | hypothetical protein | VF |
| HW43_RS24965 () | 158624..159061 | + | 438 | WP_000539684.1 | type IV pilus biogenesis protein PilM | - |
| HW43_RS24970 () | 159092..160711 | + | 1620 | WP_001034998.1 | Outer membrane lipoprotein BfpB | VF |
| HW43_RS24975 () | 160732..161447 | + | 716 | WP_040118377.1 | type 4b pilus protein PilO2 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|