MGE detailed information
MGE type: IScluster/Tn MGE length: 6364 bp
Accession: NZ_CP009101 Location: 3795097..3801460 Organism: Mycobacterium tuberculosis strain ZMC13-88 Replicon: chromosome
Accession: NZ_CP009101 Location: 3795097..3801460 Organism: Mycobacterium tuberculosis strain ZMC13-88 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JE53_RS17820 () | 3790151..3790804 | + | 654 | WP_003417903.1 | HAD family phosphatase | - |
| JE53_RS17825 () | 3790843..3792348 | - | 1506 | WP_003417905.1 | type B diterpene cyclase | - |
| JE53_RS17830 () | 3792353..3793243 | - | 891 | WP_003902459.1 | diterpene synthase | - |
| JE53_RS17835 () | 3793252..3795057 | - | 1806 | WP_023644584.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| JE53_RS17850 () | 3796445..3797434 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| JE53_RS17855 () | 3797434..3798486 | - | 1053 | WP_003900678.1 | polyprenyl synthetase family protein | - |
| JE53_RS17860 () | 3799240..3799632 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JE53_RS17865 () | 3799632..3799907 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JE53_RS21820 () | 3800119..3801460 | + | 1342 | Protein_3499 | ISNCY family transposase ISRjo3 | Transposase |
| JE53_RS17880 () | 3801650..3803845 | + | 2196 | WP_010886168.1 | PE family protein | - |
| JE53_RS17885 () | 3803916..3804788 | - | 873 | WP_003417929.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| JE53_RS17890 () | 3804862..3805572 | + | 711 | WP_038435991.1 | phosphoglycerate mutase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0.001 |