MGE detailed information
MGE type: Conjugative plasmid MGE length: 83860 bp
Accession: NZ_CP009052 Location: 1..83860 Organism: Escherichia coli NCCP15648 Replicon: plasmid p15648-2
Accession: NZ_CP009052 Location: 1..83860 Organism: Escherichia coli NCCP15648 Replicon: plasmid p15648-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A610_RS28790 () | 688..1719 | + | 1032 | WP_000907881.1 | replication initiation protein | - |
| A610_RS30330 () | 2417..2575 | + | 159 | WP_000829588.1 | hypothetical protein | - |
| A610_RS28805 () | 2630..2899 | + | 270 | WP_000079932.1 | hypothetical protein | Antitoxin Detail |
| A610_RS28810 () | 2896..3177 | + | 282 | WP_000969997.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A610_RS28815 () | 3373..3714 | - | 342 | WP_000578011.1 | hypothetical protein | - |
| A610_RS28820 () | 4014..4601 | + | 588 | WP_001418189.1 | serine acetyltransferase | - |
| A610_RS28825 () | 4883..5476 | - | 594 | WP_001401779.1 | hypothetical protein | - |
| A610_RS28835 () | 5830..7176 | + | 1347 | WP_001132021.1 | hypothetical protein | - |
| A610_RS30335 () | 7687..7989 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| A610_RS28850 () | 7986..8612 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| A610_RS28855 () | 8816..10087 | - | 1272 | WP_000457510.1 | Y-family DNA polymerase | - |
| A610_RS28860 () | 10087..10524 | - | 438 | WP_000109062.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| A610_RS28865 () | 10521..10769 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| A610_RS28880 () | 11188..12090 | + | 903 | WP_064670763.1 | DUF1281 domain-containing protein | - |
| A610_RS28885 () | 12087..12399 | + | 313 | Protein_14 | hypothetical protein | - |
| A610_RS28890 () | 12475..13158 | + | 684 | WP_001401756.1 | DNA methylase | - |
| A610_RS28895 () | 13159..13380 | + | 222 | WP_001104871.1 | hypothetical protein | - |
| A610_RS28900 () | 13274..13828 | + | 555 | WP_077635412.1 | DUF1380 family protein | - |
| A610_RS28905 () | 13873..14648 | + | 776 | Protein_18 | hypothetical protein | - |
| A610_RS28920 () | 15186..15488 | + | 303 | WP_001666994.1 | antirestriction protein | - |
| A610_RS28925 () | 15535..15957 | + | 423 | WP_013307864.1 | DUF1380 family protein | - |
| A610_RS28930 () | 15954..16145 | + | 192 | WP_001703906.1 | hypothetical protein | - |
| A610_RS30535 () | 16478..16546 | - | 69 | Protein_22 | pilus protein | - |
| A610_RS28945 () | 16915..17442 | + | 528 | WP_001760699.1 | single-stranded DNA-binding protein | - |
| A610_RS28950 () | 17500..17733 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| A610_RS28955 () | 17792..19744 | + | 1953 | WP_117407354.1 | ParB/RepB/Spo0J family partition protein | - |
| A610_RS28960 () | 19799..20233 | + | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| A610_RS28965 () | 20230..20949 | + | 720 | WP_001276268.1 | plasmid SOS inhibition protein A | - |
| A610_RS28970 () | 20946..21542 | + | 597 | WP_001401763.1 | hypothetical protein | - |
| A610_RS28980 () | 22004..22504 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| A610_RS30340 () | 22644..23039 | - | 396 | WP_162886172.1 | hypothetical protein | - |
| A610_RS28995 () | 23237..23671 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| A610_RS29000 () | 23764..24030 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| A610_RS29005 () | 24207..24596 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| A610_RS29010 () | 24593..25483 | + | 891 | WP_000038343.1 | Recombination-promoting nuclease RpnA | VF |
| A610_RS29015 () | 25483..25728 | + | 246 | WP_001260882.1 | hypothetical protein | - |
| A610_RS29020 () | 25759..26010 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| A610_RS30540 () | 26044..26241 | - | 198 | Protein_37 | hypothetical protein | - |
| A610_RS29035 () | 26590..27438 | + | 849 | WP_013307867.1 | DUF4942 domain-containing protein | - |
| A610_RS29040 () | 27524..27859 | - | 336 | WP_000157090.1 | hypothetical protein | - |
| A610_RS29045 () | 28092..28424 | + | 333 | WP_001291057.1 | hypothetical protein | - |
| A610_RS29050 () | 28436..31156 | + | 2721 | WP_000991405.1 | Protein TraI | Relaxase |
| A610_RS29055 () | 31377..33677 | - | 2301 | WP_013307869.1 | TraM recognition domain-containing protein | - |
| A610_RS29060 () | 33658..34782 | - | 1125 | WP_000152382.1 | DsbC family protein | - |
| A610_RS29065 () | 34779..36086 | - | 1308 | WP_021577249.1 | IncI1-type conjugal transfer protein TrbA | - |
| A610_RS29075 () | 36727..36978 | + | 252 | WP_001081067.1 | hypothetical protein | - |
| A610_RS30345 () | 37041..37217 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| A610_RS29080 () | 37367..37834 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| A610_RS29085 () | 37993..38616 | + | 624 | WP_001155247.1 | DNA-binding protein | - |
| A610_RS29095 () | 38814..39029 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| A610_RS29100 () | 39033..39401 | - | 369 | WP_001345852.1 | hypothetical protein | - |
| A610_RS29105 () | 39413..39604 | - | 192 | WP_000751583.1 | hypothetical protein | - |
| A610_RS29110 () | 39692..39934 | - | 243 | WP_000650923.1 | hypothetical protein | - |
| A610_RS29115 () | 40264..40416 | + | 153 | WP_001302699.1 | Hok/Gef family protein | - |
| A610_RS29120 () | 40554..42140 | - | 1587 | WP_000004564.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| A610_RS29125 () | 42414..43067 | - | 654 | WP_001401768.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| A610_RS29130 () | 43155..45320 | - | 2166 | WP_000691808.1 | DotA/TraY family protein | - |
| A610_RS29135 () | 45395..45964 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| A610_RS29140 () | 45961..47166 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| A610_RS29145 () | 47124..47744 | - | 621 | WP_000286854.1 | hypothetical protein | - |
| A610_RS29150 () | 47744..50788 | - | 3045 | WP_001024766.1 | conjugal transfer protein | - |
| A610_RS29160 () | 51083..51901 | - | 819 | WP_000753550.1 | hypothetical protein | - |
| A610_RS29165 () | 51816..52067 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| A610_RS29170 () | 52124..52522 | - | 399 | WP_000088812.1 | hypothetical protein | - |
| A610_RS29175 () | 52569..53096 | - | 528 | WP_001407937.1 | conjugal transfer protein TraQ | - |
| A610_RS29180 () | 53096..53809 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| A610_RS29185 () | 53806..55143 | - | 1338 | WP_013307873.1 | conjugal transfer protein TraO | - |
| A610_RS29190 () | 55147..56121 | - | 975 | WP_000547383.1 | hypothetical protein | VF |
| A610_RS29195 () | 56132..56827 | - | 696 | WP_001681668.1 | DotI/IcmL family type IV secretion protein | - |
| A610_RS29200 () | 56839..57189 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| A610_RS29205 () | 57206..61267 | - | 4062 | WP_013307874.1 | DNA primase | - |
| A610_RS29210 () | 61621..62202 | - | 582 | WP_025750394.1 | hypothetical protein | - |
| A610_RS29215 () | 62434..62724 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| A610_RS29220 () | 62721..63869 | - | 1149 | WP_013307876.1 | putative protein YggR | VF |
| A610_RS29225 () | 63853..64689 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| A610_RS29230 () | 64686..65144 | - | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| A610_RS29235 () | 65248..66450 | - | 1203 | WP_013307879.1 | conjugal transfer protein TraF | - |
| A610_RS29240 () | 66552..67373 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| A610_RS29245 () | 67586..68710 | - | 1125 | WP_117407355.1 | site-specific integrase | - |
| A610_RS29275 () | 69963..70202 | + | 240 | WP_000271302.1 | hypothetical protein | - |
| A610_RS29280 () | 70207..71568 | - | 1362 | WP_021532399.1 | hypothetical protein | VF |
| A610_RS29285 () | 71586..72212 | - | 627 | WP_013307883.1 | prepilin peptidase | - |
| A610_RS29290 () | 72228..72713 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| A610_RS29295 () | 72758..73294 | - | 537 | WP_000111521.1 | hypothetical protein | VF |
| A610_RS29300 () | 73356..74450 | - | 1095 | WP_000697154.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| A610_RS29305 () | 74452..75960 | - | 1509 | WP_000880806.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| A610_RS29310 () | 76063..76521 | - | 459 | WP_000095887.1 | hypothetical protein | VF |
| A610_RS29315 () | 76511..77806 | - | 1296 | WP_000129885.1 | type 4b pilus protein PilO2 | - |
| A610_RS29320 () | 77827..79446 | - | 1620 | WP_001035562.1 | Outer membrane lipoprotein BfpB | VF |
| A610_RS29325 () | 79478..79915 | - | 438 | WP_000539952.1 | hypothetical protein | VF |
| A610_RS29330 () | 79919..80989 | - | 1071 | WP_000730430.1 | hypothetical protein | VF |
| A610_RS29335 () | 81216..81551 | - | 336 | WP_001335624.1 | hypothetical protein | - |
| A610_RS29340 () | 81668..81985 | - | 318 | WP_001330559.1 | PilI type IV pilus biogenesis protein | - |
| A610_RS30350 () | 81991..82134 | - | 144 | WP_072105535.1 | hypothetical protein | - |
| A610_RS29350 () | 82401..83063 | - | 663 | WP_005082527.1 | hypothetical protein | - |
| A610_RS29355 () | 83203..83844 | - | 642 | WP_013307884.1 | conjugal transfer protein transcription antitermination factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|