MGE detailed information
MGE type: Genomic_island MGE length: 26530 bp
Accession: NZ_CP009037 Location: 2300669..2327198 Organism: Xanthomonas citri pv. citri strain AW15 Replicon: chromosome
Accession: NZ_CP009037 Location: 2300669..2327198 Organism: Xanthomonas citri pv. citri strain AW15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD07_RS10385 () | 2297591..2297767 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| AMD07_RS10390 () | 2297987..2298388 | + | 402 | WP_003485983.1 | H-NS histone family protein | - |
| AMD07_RS10400 () | 2298677..2299768 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| AMD07_RS10410 () | 2300669..2302840 | + | 2172 | WP_015472108.1 | DotA/TraY family protein | - |
| AMD07_RS10415 () | 2302850..2303371 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| AMD07_RS26050 () | 2304236..2305192 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| AMD07_RS10425 () | 2305259..2306392 | - | 1134 | Protein_1969 | IS5 family transposase ISXo4 | Transposase |
| AMD07_RS10430 () | 2306432..2307519 | - | 1088 | Protein_1970 | IS3 family transposase ISXcd1 | Transposase |
| AMD07_RS10440 () | 2307732..2307911 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| AMD07_RS10445 () | 2308182..2308496 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| AMD07_RS10450 () | 2308499..2308789 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AMD07_RS10455 () | 2308777..2309055 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| AMD07_RS10460 () | 2309225..2310493 | - | 1269 | Protein_1975 | Tn3 family transposase ISPsy42 | Transposase |
| AMD07_RS10470 () | 2310542..2311767 | + | 1226 | Protein_1976 | IS3 family transposase ISJsp1 | Transposase |
| AMD07_RS10475 () | 2312386..2313342 | + | 957 | WP_015472114.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| AMD07_RS10480 () | 2313532..2315640 | + | 2109 | WP_015472116.1 | AAA family ATPase | - |
| AMD07_RS10485 () | 2315691..2315879 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| AMD07_RS10490 () | 2315876..2317462 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| AMD07_RS10495 () | 2317459..2318376 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| AMD07_RS10500 () | 2318385..2318714 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| AMD07_RS10505 () | 2318818..2319228 | + | 411 | WP_011051586.1 | plasmid pRiA4b ORF-3 family protein | - |
| AMD07_RS26055 () | 2319251..2319427 | - | 177 | WP_015463318.1 | hypothetical protein | - |
| AMD07_RS24240 () | 2319620..2319820 | - | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| AMD07_RS10515 () | 2320381..2320641 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| AMD07_RS10520 () | 2321040..2322041 | - | 1002 | WP_011051588.1 | replication protein | - |
| AMD07_RS10525 () | 2322274..2322507 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| AMD07_RS10530 () | 2323094..2324488 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| AMD07_RS10535 () | 2324485..2326602 | + | 2118 | WP_015463321.1 | ATP-binding protein | - |
| AMD07_RS26060 () | 2327022..2327198 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| AMD07_RS10545 () | 2327481..2328587 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| AMD07_RS10550 () | 2328630..2329139 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| AMD07_RS10555 () | 2329151..2330809 | - | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| AMD07_RS10560 () | 2331120..2331725 | + | 606 | WP_170914521.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0.001 |