MGE detailed information
MGE type: IScluster/Tn MGE length: 6509 bp
Accession: NZ_CP009028 Location: 2825076..2831584 Organism: Xanthomonas citri pv. citri strain 5208 Replicon: chromosome
Accession: NZ_CP009028 Location: 2825076..2831584 Organism: Xanthomonas citri pv. citri strain 5208 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD17_RS12775 () | 2820486..2822657 | + | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| AMD17_RS12780 () | 2822667..2823188 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| AMD17_RS24910 () | 2823627..2823767 | - | 141 | WP_157860651.1 | hypothetical protein | - |
| AMD17_RS25265 () | 2824053..2825009 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| AMD17_RS12790 () | 2825076..2826209 | - | 1134 | Protein_2414 | IS5 family transposase ISXo4 | Transposase |
| AMD17_RS12795 () | 2826249..2827336 | - | 1088 | Protein_2415 | IS3 family transposase ISXcd1 | Transposase |
| AMD17_RS12805 () | 2827549..2827728 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| AMD17_RS12810 () | 2827999..2828313 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| AMD17_RS12815 () | 2828316..2828606 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AMD17_RS12820 () | 2828594..2828872 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| AMD17_RS12825 () | 2829042..2830310 | - | 1269 | Protein_2420 | Tn3 family transposase ISPsy42 | Transposase |
| AMD17_RS12835 () | 2830359..2831584 | + | 1226 | Protein_2421 | IS3 family transposase ISJsp1 | Transposase |
| AMD17_RS12840 () | 2832202..2833158 | + | 957 | WP_197707729.1 | recombinase family protein | - |
| AMD17_RS12845 () | 2833348..2835456 | + | 2109 | WP_011051581.1 | AAA family ATPase | - |
| AMD17_RS12850 () | 2835507..2835695 | + | 189 | WP_011051582.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | IScluster/Tn | TA20720 | NC_003919 | 2825080..2831588 | 0 |