MGE detailed information
MGE type: Genomic_island MGE length: 26522 bp
Accession: NZ_CP009016 Location: 2809752..2836273 Organism: Xanthomonas citri pv. citri strain GD3 Replicon: chromosome
Accession: NZ_CP009016 Location: 2809752..2836273 Organism: Xanthomonas citri pv. citri strain GD3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD22_RS12730 () | 2806674..2806850 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| AMD22_RS12735 () | 2807070..2807471 | + | 402 | WP_003485983.1 | H-NS histone family protein | - |
| AMD22_RS12745 () | 2807760..2808851 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| AMD22_RS12755 () | 2809752..2811923 | + | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| AMD22_RS12760 () | 2811933..2812454 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| AMD22_RS25035 () | 2813319..2814275 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| AMD22_RS12770 () | 2814342..2815475 | - | 1134 | Protein_2393 | IS5 family transposase ISXo4 | Transposase |
| AMD22_RS12775 () | 2815515..2816602 | - | 1088 | Protein_2394 | IS3 family transposase ISXcd1 | Transposase |
| AMD22_RS12785 () | 2816815..2816994 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| AMD22_RS12790 () | 2817265..2817579 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| AMD22_RS12795 () | 2817582..2817872 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AMD22_RS12800 () | 2817860..2818138 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| AMD22_RS12805 () | 2818308..2819576 | - | 1269 | Protein_2399 | Tn3 family transposase ISPsy42 | Transposase |
| AMD22_RS12815 () | 2819625..2820850 | + | 1226 | Protein_2400 | IS3 family transposase ISJsp1 | Transposase |
| AMD22_RS12820 () | 2821469..2822425 | + | 957 | WP_015463313.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| AMD22_RS12825 () | 2822615..2824723 | + | 2109 | WP_011051581.1 | AAA family ATPase | - |
| AMD22_RS12830 () | 2824774..2824962 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| AMD22_RS12835 () | 2824959..2826545 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| AMD22_RS12840 () | 2826542..2827459 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| AMD22_RS12845 () | 2827468..2827797 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| AMD22_RS12850 () | 2827901..2828311 | + | 411 | WP_011051586.1 | plasmid pRiA4b ORF-3 family protein | - |
| AMD22_RS25040 () | 2828334..2828510 | - | 177 | WP_015463318.1 | hypothetical protein | - |
| AMD22_RS23470 () | 2828703..2828903 | - | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| AMD22_RS12860 () | 2829464..2829724 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| AMD22_RS12865 () | 2830123..2831124 | - | 1002 | WP_011051588.1 | replication protein | - |
| AMD22_RS12870 () | 2831357..2831590 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| AMD22_RS12875 () | 2832169..2833563 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| AMD22_RS12880 () | 2833560..2835677 | + | 2118 | WP_015463321.1 | ATP-binding protein | - |
| AMD22_RS25045 () | 2836097..2836273 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| AMD22_RS12890 () | 2836556..2837662 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| AMD22_RS12895 () | 2837705..2838214 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| AMD22_RS12900 () | 2838226..2839884 | - | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| AMD22_RS12905 () | 2840195..2840800 | + | 606 | WP_170914521.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0 |