MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33695 bp
Accession: NZ_CP009011 Location: 1..33695 Organism: Xanthomonas citri pv. citri strain JX4 Replicon: plasmid pXAC33
Accession: NZ_CP009011 Location: 1..33695 Organism: Xanthomonas citri pv. citri strain JX4 Replicon: plasmid pXAC33
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD21_RS00005 () | 457..1278 | - | 822 | WP_011052929.1 | hypothetical protein | - |
| AMD21_RS22370 () | 1918..2082 | + | 165 | WP_155400514.1 | hypothetical protein | - |
| AMD21_RS00015 () | 2131..3218 | + | 1088 | WP_087943923.1 | IS3 family transposase ISXac2 | Transposase |
| AMD21_RS22375 () | 3184..3813 | - | 630 | WP_011052932.1 | Tn3 family transposase ISPsy42 | Transposase |
| AMD21_RS00025 () | 3993..4244 | + | 252 | WP_003108276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| AMD21_RS00030 () | 4241..4636 | + | 396 | WP_015463818.1 | type II toxin-antitoxin system VapC family toxin | - |
| AMD21_RS00035 () | 4797..5174 | - | 378 | WP_040260048.1 | hypothetical protein | - |
| AMD21_RS22380 () | 5233..5478 | - | 246 | Protein_7 | IS3 family transposase ISStma14 | Transposase |
| AMD21_RS22385 () | 5591..5863 | + | 273 | WP_005934628.1 | hypothetical protein | - |
| AMD21_RS24945 () | 6005..6178 | - | 174 | WP_011052974.1 | hypothetical protein | - |
| AMD21_RS00040 () | 6178..6573 | - | 396 | WP_011052973.1 | hypothetical protein | - |
| AMD21_RS00045 () | 6921..7367 | + | 447 | WP_011052937.1 | hypothetical protein | - |
| AMD21_RS00050 () | 7364..8073 | + | 710 | Protein_12 | plasmid stabilization protein | - |
| AMD21_RS00055 () | 8122..8475 | + | 354 | WP_039700904.1 | hypothetical protein | - |
| AMD21_RS22390 () | 8870..9079 | - | 210 | WP_015462608.1 | helix-turn-helix domain-containing protein | - |
| AMD21_RS00060 () | 9076..9384 | - | 309 | WP_015462607.1 | hypothetical protein | - |
| AMD21_RS00065 () | 9840..10466 | + | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| AMD21_RS00070 () | 10463..10786 | + | 324 | WP_005918229.1 | hypothetical protein | - |
| AMD21_RS00075 () | 10931..11245 | + | 315 | WP_005918227.1 | hypothetical protein | - |
| AMD21_RS00080 () | 11521..12705 | + | 1185 | Protein_19 | replication initiation protein | - |
| AMD21_RS00085 () | 13071..16451 | - | 3381 | WP_011052943.1 | TAL effector repeat-containing protein | - |
| AMD21_RS24455 () | 16697..16918 | - | 222 | WP_011052944.1 | hypothetical protein | - |
| AMD21_RS00100 () | 17208..17744 | - | 537 | WP_015463823.1 | plasmid pRiA4b ORF-3 family protein | - |
| AMD21_RS00105 () | 17734..17946 | - | 213 | WP_011052947.1 | hypothetical protein | - |
| AMD21_RS24460 () | 17943..18194 | - | 252 | WP_125459571.1 | hypothetical protein | - |
| AMD21_RS00110 () | 18217..18549 | - | 333 | WP_015463824.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| AMD21_RS00115 () | 18549..18806 | - | 258 | WP_011052949.1 | antitoxin | Antitoxin Detail |
| AMD21_RS00120 () | 19012..19614 | + | 603 | WP_011052950.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| AMD21_RS22405 () | 19598..19902 | + | 305 | Protein_28 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| AMD21_RS00125 () | 20069..20275 | - | 207 | Protein_29 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| AMD21_RS22410 () | 20320..20889 | - | 570 | Protein_30 | UPF0149 family protein | - |
| AMD21_RS00130 () | 20908..22122 | - | 1215 | WP_011050083.1 | IS4 family transposase ISXac1 | Transposase |
| AMD21_RS24465 () | 22196..22378 | - | 183 | Protein_32 | UPF0149 family protein | - |
| AMD21_RS00135 () | 22397..25372 | - | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| AMD21_RS00140 () | 25377..25796 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| AMD21_RS00145 () | 25796..26035 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| AMD21_RS00150 () | 26249..27172 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| AMD21_RS00155 () | 27291..30581 | - | 3291 | WP_011052957.1 | TAL effector repeat-containing protein | - |
| AMD21_RS00165 () | 31835..32071 | - | 237 | WP_015463816.1 | hypothetical protein | - |
| AMD21_RS00170 () | 32068..32697 | - | 630 | WP_015463817.1 | AAA family ATPase | - |
| AMD21_RS00175 () | 32780..33517 | - | 738 | WP_011052960.1 | DNA-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|