MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 26933 bp
Accession: NZ_CP009005 Location: 1..26933 Organism: Xanthomonas citri pv. citri strain MF20 Replicon: plasmid pXAC33
Accession: NZ_CP009005 Location: 1..26933 Organism: Xanthomonas citri pv. citri strain MF20 Replicon: plasmid pXAC33
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD10_RS00005 () | 89..340 | + | 252 | WP_003108276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| AMD10_RS00010 () | 337..732 | + | 396 | WP_015463818.1 | type II toxin-antitoxin system VapC family toxin | - |
| AMD10_RS00015 () | 893..1270 | - | 378 | WP_004666662.1 | hypothetical protein | - |
| AMD10_RS22510 () | 1329..1574 | - | 246 | Protein_3 | IS3 family transposase ISStma14 | Transposase |
| AMD10_RS22515 () | 1687..1959 | + | 273 | WP_005934628.1 | hypothetical protein | - |
| AMD10_RS25140 () | 2101..2274 | - | 174 | WP_011052974.1 | hypothetical protein | - |
| AMD10_RS00020 () | 2274..2669 | - | 396 | WP_011052973.1 | hypothetical protein | - |
| AMD10_RS00025 () | 3017..3463 | + | 447 | WP_011052937.1 | hypothetical protein | - |
| AMD10_RS00030 () | 3460..4169 | + | 710 | Protein_8 | plasmid stabilization protein | - |
| AMD10_RS00035 () | 4218..4571 | + | 354 | WP_039700904.1 | hypothetical protein | - |
| AMD10_RS22520 () | 4966..5175 | - | 210 | WP_015462608.1 | helix-turn-helix domain-containing protein | - |
| AMD10_RS00040 () | 5172..5480 | - | 309 | WP_015462607.1 | hypothetical protein | - |
| AMD10_RS00045 () | 5936..6562 | + | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| AMD10_RS00050 () | 6559..6882 | + | 324 | WP_005918229.1 | hypothetical protein | - |
| AMD10_RS00055 () | 7027..7341 | + | 315 | WP_005918227.1 | hypothetical protein | - |
| AMD10_RS00060 () | 7589..8809 | + | 1221 | WP_011052942.1 | replication initiation protein | - |
| AMD10_RS00065 () | 9175..12555 | - | 3381 | WP_011052943.1 | TAL effector repeat-containing protein | - |
| AMD10_RS24620 () | 12801..13022 | - | 222 | WP_011052944.1 | hypothetical protein | - |
| AMD10_RS00080 () | 13312..13848 | - | 537 | WP_015463823.1 | plasmid pRiA4b ORF-3 family protein | - |
| AMD10_RS00085 () | 13838..14050 | - | 213 | WP_011052947.1 | hypothetical protein | - |
| AMD10_RS24625 () | 14047..14298 | - | 252 | WP_125459571.1 | hypothetical protein | - |
| AMD10_RS00090 () | 14321..14653 | - | 333 | WP_015463824.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| AMD10_RS00095 () | 14653..14910 | - | 258 | WP_011052949.1 | antitoxin | Antitoxin Detail |
| AMD10_RS00100 () | 15116..15718 | + | 603 | WP_011052950.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| AMD10_RS22535 () | 15702..16006 | + | 305 | Protein_24 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| AMD10_RS00105 () | 16173..16379 | - | 207 | Protein_25 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| AMD10_RS22540 () | 16424..16993 | - | 570 | Protein_26 | UPF0149 family protein | - |
| AMD10_RS00110 () | 17012..18226 | - | 1215 | WP_011050083.1 | IS4 family transposase ISXac1 | Transposase |
| AMD10_RS24630 () | 18300..18482 | - | 183 | Protein_28 | UPF0149 family protein | - |
| AMD10_RS00115 () | 18501..21476 | - | 2976 | Protein_29 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| AMD10_RS00125 () | 21481..21900 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| AMD10_RS00130 () | 21900..22139 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| AMD10_RS00135 () | 22353..23276 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| AMD10_RS00140 () | 23395..26685 | - | 3291 | WP_011052957.1 | TAL effector repeat-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|