MGE detailed information
MGE type: Genomic_island MGE length: 26522 bp
Accession: NZ_CP009004 Location: 2809332..2835853 Organism: Xanthomonas citri pv. citri strain MN10 Replicon: chromosome
Accession: NZ_CP009004 Location: 2809332..2835853 Organism: Xanthomonas citri pv. citri strain MN10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD16_RS12725 () | 2806254..2806430 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| AMD16_RS12730 () | 2806650..2807051 | + | 402 | WP_003485983.1 | H-NS histone family protein | - |
| AMD16_RS12740 () | 2807340..2808431 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| AMD16_RS12750 () | 2809332..2811503 | + | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| AMD16_RS12755 () | 2811513..2812034 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| AMD16_RS25005 () | 2812899..2813855 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| AMD16_RS12765 () | 2813922..2815055 | - | 1134 | Protein_2392 | IS5 family transposase ISXo4 | Transposase |
| AMD16_RS12770 () | 2815095..2816182 | - | 1088 | Protein_2393 | IS3 family transposase ISXcd1 | Transposase |
| AMD16_RS12780 () | 2816395..2816574 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| AMD16_RS12785 () | 2816845..2817159 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| AMD16_RS12790 () | 2817162..2817452 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AMD16_RS12795 () | 2817440..2817718 | - | 279 | WP_040259533.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| AMD16_RS12800 () | 2817888..2819156 | - | 1269 | Protein_2398 | Tn3 family transposase ISPsy42 | Transposase |
| AMD16_RS12810 () | 2819205..2820430 | + | 1226 | Protein_2399 | IS3 family transposase ISJsp1 | Transposase |
| AMD16_RS12815 () | 2821049..2822005 | + | 957 | WP_015463313.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| AMD16_RS12820 () | 2822195..2824303 | + | 2109 | WP_011051581.1 | AAA family ATPase | - |
| AMD16_RS12825 () | 2824354..2824542 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| AMD16_RS12830 () | 2824539..2826125 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| AMD16_RS12835 () | 2826122..2827039 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| AMD16_RS12840 () | 2827048..2827377 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| AMD16_RS12845 () | 2827481..2827891 | + | 411 | WP_011051586.1 | plasmid pRiA4b ORF-3 family protein | - |
| AMD16_RS25010 () | 2827914..2828090 | - | 177 | WP_015463318.1 | hypothetical protein | - |
| AMD16_RS23480 () | 2828283..2828483 | - | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| AMD16_RS12855 () | 2829044..2829304 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| AMD16_RS12860 () | 2829703..2830704 | - | 1002 | WP_011051588.1 | replication protein | - |
| AMD16_RS12865 () | 2830937..2831170 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| AMD16_RS12870 () | 2831749..2833143 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| AMD16_RS12875 () | 2833140..2835257 | + | 2118 | WP_015463321.1 | ATP-binding protein | - |
| AMD16_RS25015 () | 2835677..2835853 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| AMD16_RS12885 () | 2836136..2837242 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| AMD16_RS12890 () | 2837285..2837794 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| AMD16_RS12895 () | 2837806..2839464 | - | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| AMD16_RS12900 () | 2839775..2840380 | + | 606 | WP_170914521.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0 |