MGE detailed information
MGE type: Genomic_island MGE length: 26522 bp
Accession: NZ_CP009001 Location: 2808010..2834531 Organism: Xanthomonas citri pv. citri strain MN11 Replicon: chromosome
Accession: NZ_CP009001 Location: 2808010..2834531 Organism: Xanthomonas citri pv. citri strain MN11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD15_RS12695 () | 2804932..2805108 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| AMD15_RS12700 () | 2805328..2805729 | + | 402 | WP_003485983.1 | H-NS histone family protein | - |
| AMD15_RS12710 () | 2806018..2807109 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| AMD15_RS12720 () | 2808010..2810181 | + | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| AMD15_RS12725 () | 2810191..2810712 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| AMD15_RS25125 () | 2811577..2812533 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| AMD15_RS12735 () | 2812600..2813733 | - | 1134 | Protein_2397 | IS5 family transposase ISXo4 | Transposase |
| AMD15_RS12740 () | 2813773..2814860 | - | 1088 | Protein_2398 | IS3 family transposase ISXcd1 | Transposase |
| AMD15_RS12750 () | 2815073..2815252 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| AMD15_RS12755 () | 2815523..2815837 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| AMD15_RS12760 () | 2815840..2816130 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AMD15_RS12765 () | 2816118..2816396 | - | 279 | WP_040259533.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| AMD15_RS12770 () | 2816566..2817834 | - | 1269 | Protein_2403 | Tn3 family transposase ISPsy42 | Transposase |
| AMD15_RS12780 () | 2817883..2819108 | + | 1226 | Protein_2404 | IS3 family transposase ISJsp1 | Transposase |
| AMD15_RS12785 () | 2819727..2820683 | + | 957 | WP_015463313.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| AMD15_RS12790 () | 2820873..2822981 | + | 2109 | WP_011051581.1 | AAA family ATPase | - |
| AMD15_RS12795 () | 2823032..2823220 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| AMD15_RS12800 () | 2823217..2824803 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| AMD15_RS12805 () | 2824800..2825717 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| AMD15_RS12810 () | 2825726..2826055 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| AMD15_RS12815 () | 2826159..2826569 | + | 411 | WP_011051586.1 | plasmid pRiA4b ORF-3 family protein | - |
| AMD15_RS25130 () | 2826592..2826768 | - | 177 | WP_015463318.1 | hypothetical protein | - |
| AMD15_RS25135 () | 2826831..2827016 | - | 186 | WP_015463319.1 | hypothetical protein | - |
| AMD15_RS23450 () | 2826961..2827161 | - | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| AMD15_RS12825 () | 2827722..2827982 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| AMD15_RS12830 () | 2828381..2829382 | - | 1002 | WP_011051588.1 | replication protein | - |
| AMD15_RS12835 () | 2829615..2829848 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| AMD15_RS12840 () | 2830427..2831821 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| AMD15_RS12845 () | 2831818..2833935 | + | 2118 | WP_015463321.1 | ATP-binding protein | - |
| AMD15_RS25035 () | 2834355..2834531 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| AMD15_RS12855 () | 2834814..2835920 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| AMD15_RS12860 () | 2835963..2836472 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| AMD15_RS12865 () | 2836484..2838142 | - | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| AMD15_RS12870 () | 2838453..2839058 | + | 606 | WP_170914521.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0 |